Protein–RNA interactions for Protein: Q9BXA9

SALL3, Sal-like protein 3, humanhuman

Predictions only

Length 1,300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SALL3Q9BXA9 AL079305.1-201ENST00000623159 3008 ntBASIC4.52□□□□□ -1.69
SALL3Q9BXA9 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC4.52□□□□□ -1.69
SALL3Q9BXA9 AC027287.1-201ENST00000553115 1453 ntBASIC4.52□□□□□ -1.69
SALL3Q9BXA9 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
SALL3Q9BXA9 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
SALL3Q9BXA9 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC4.51□□□□□ -1.69
SALL3Q9BXA9 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
SALL3Q9BXA9 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.51□□□□□ -1.69
SALL3Q9BXA9 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC4.51□□□□□ -1.69
SALL3Q9BXA9 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC4.51□□□□□ -1.69
SALL3Q9BXA9 MT-TD-201ENST00000387419 68 ntBASIC4.51□□□□□ -1.69
SALL3Q9BXA9 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
SALL3Q9BXA9 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC4.51□□□□□ -1.69
SALL3Q9BXA9 AC017079.2-201ENST00000416102 485 ntBASIC4.51□□□□□ -1.69
SALL3Q9BXA9 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC4.51□□□□□ -1.69
SALL3Q9BXA9 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC4.51□□□□□ -1.69
SALL3Q9BXA9 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC4.51□□□□□ -1.69
SALL3Q9BXA9 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC4.51□□□□□ -1.69
SALL3Q9BXA9 TRGVB-201ENST00000453257 471 ntBASIC4.51□□□□□ -1.69
SALL3Q9BXA9 AC097493.1-201ENST00000463958 372 ntBASIC4.51□□□□□ -1.69
SALL3Q9BXA9 AC023598.1-201ENST00000472521 361 ntBASIC4.51□□□□□ -1.69
SALL3Q9BXA9 ACTR3P3-201ENST00000480448 893 ntBASIC4.51□□□□□ -1.69
SALL3Q9BXA9 MTCYBP17-201ENST00000503579 789 ntBASIC4.51□□□□□ -1.69
SALL3Q9BXA9 ARL4AP2-201ENST00000507378 601 ntBASIC4.51□□□□□ -1.69
SALL3Q9BXA9 AF131216.2-201ENST00000512316 564 ntBASIC4.51□□□□□ -1.69
SALL3Q9BXA9 AC006499.2-201ENST00000513470 337 ntBASIC4.51□□□□□ -1.69
SALL3Q9BXA9 IGKV3OR22-2-201ENST00000517943 313 ntBASIC4.51□□□□□ -1.69
SALL3Q9BXA9 ARL2BPP5-201ENST00000523141 481 ntBASIC4.51□□□□□ -1.69
SALL3Q9BXA9 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC4.51□□□□□ -1.69
SALL3Q9BXA9 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC4.51□□□□□ -1.69
SALL3Q9BXA9 MIR3944-201ENST00000581277 108 ntBASIC4.51□□□□□ -1.69
SALL3Q9BXA9 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC4.51□□□□□ -1.69
SALL3Q9BXA9 BNIP3P11-201ENST00000603878 563 ntBASIC4.51□□□□□ -1.69
SALL3Q9BXA9 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC4.51□□□□□ -1.69
SALL3Q9BXA9 AC104010.1-201ENST00000616889 150 ntBASIC4.51□□□□□ -1.69
SALL3Q9BXA9 AC000123.2-201ENST00000623124 461 ntBASIC4.51□□□□□ -1.69
SALL3Q9BXA9 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC4.51□□□□□ -1.69
SALL3Q9BXA9 AC244205.2-202ENST00000635781 342 ntBASIC4.51□□□□□ -1.69
SALL3Q9BXA9 AP000553.6-201ENST00000641242 118 ntBASIC4.51□□□□□ -1.69
SALL3Q9BXA9 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
SALL3Q9BXA9 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
SALL3Q9BXA9 AC022031.1-201ENST00000585985 2593 ntBASIC4.51□□□□□ -1.69
SALL3Q9BXA9 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC4.51□□□□□ -1.69
SALL3Q9BXA9 PAPPA-AS1-201ENST00000445861 2450 ntBASIC4.51□□□□□ -1.69
SALL3Q9BXA9 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
SALL3Q9BXA9 RPS4XP5-202ENST00000449995 1334 ntBASIC4.51□□□□□ -1.69
SALL3Q9BXA9 SLC2A3P1-201ENST00000519666 1451 ntBASIC4.51□□□□□ -1.69
SALL3Q9BXA9 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC4.51□□□□□ -1.69
SALL3Q9BXA9 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
SALL3Q9BXA9 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
SALL3Q9BXA9 SNRPEP3-201ENST00000338402 276 ntBASIC4.5□□□□□ -1.69
SALL3Q9BXA9 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
SALL3Q9BXA9 U8.14-201ENST00000390843 143 ntBASIC4.5□□□□□ -1.69
SALL3Q9BXA9 RNU6-876P-201ENST00000391295 104 ntBASIC4.5□□□□□ -1.69
SALL3Q9BXA9 MTHFD2P2-201ENST00000407725 247 ntBASIC4.5□□□□□ -1.69
SALL3Q9BXA9 MIR1305-201ENST00000408300 86 ntBASIC4.5□□□□□ -1.69
SALL3Q9BXA9 RNA5SP44-201ENST00000410446 133 ntBASIC4.5□□□□□ -1.69
SALL3Q9BXA9 HMGB3P20-201ENST00000417997 600 ntBASIC4.5□□□□□ -1.69
SALL3Q9BXA9 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC4.5□□□□□ -1.69
SALL3Q9BXA9 AC069157.1-201ENST00000421749 137 ntBASIC4.5□□□□□ -1.69
SALL3Q9BXA9 AC233981.1-201ENST00000423224 461 ntBASIC4.5□□□□□ -1.69
SALL3Q9BXA9 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC4.5□□□□□ -1.69
SALL3Q9BXA9 AC073464.1-201ENST00000429823 534 ntBASIC4.5□□□□□ -1.69
SALL3Q9BXA9 MTND6P13-201ENST00000443510 523 ntBASIC4.5□□□□□ -1.69
SALL3Q9BXA9 GAPDHP17-201ENST00000449858 1001 ntBASIC4.5□□□□□ -1.69
SALL3Q9BXA9 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC4.5□□□□□ -1.69
SALL3Q9BXA9 AC087312.1-201ENST00000471411 480 ntBASIC4.5□□□□□ -1.69
SALL3Q9BXA9 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC4.5□□□□□ -1.69
SALL3Q9BXA9 AC114981.1-201ENST00000503897 678 ntBASIC4.5□□□□□ -1.69
SALL3Q9BXA9 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC4.5□□□□□ -1.69
SALL3Q9BXA9 MTND3P22-201ENST00000510932 243 ntBASIC4.5□□□□□ -1.69
SALL3Q9BXA9 AC005798.1-201ENST00000513715 387 ntBASIC4.5□□□□□ -1.69
SALL3Q9BXA9 SNORD116-26-201ENST00000516006 96 ntBASIC4.5□□□□□ -1.69
SALL3Q9BXA9 AL512310.1-201ENST00000548639 172 ntBASIC4.5□□□□□ -1.69
SALL3Q9BXA9 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC4.5□□□□□ -1.69
SALL3Q9BXA9 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC4.5□□□□□ -1.69
SALL3Q9BXA9 AC009101.1-201ENST00000568135 242 ntBASIC4.5□□□□□ -1.69
SALL3Q9BXA9 MIR4307-201ENST00000582802 84 ntBASIC4.5□□□□□ -1.69
SALL3Q9BXA9 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC4.5□□□□□ -1.69
SALL3Q9BXA9 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC4.5□□□□□ -1.69
SALL3Q9BXA9 AC025449.1-201ENST00000603896 529 ntBASIC4.5□□□□□ -1.69
SALL3Q9BXA9 AC007363.1-201ENST00000604736 620 ntBASIC4.5□□□□□ -1.69
SALL3Q9BXA9 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC4.5□□□□□ -1.69
SALL3Q9BXA9 AL136221.1-201ENST00000621449 509 ntBASIC4.5□□□□□ -1.69
SALL3Q9BXA9 AL359697.1-201ENST00000624879 587 ntBASIC4.5□□□□□ -1.69
SALL3Q9BXA9 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC4.5□□□□□ -1.69
SALL3Q9BXA9 MIR1321-201ENST00000637766 79 ntBASIC4.5□□□□□ -1.69
SALL3Q9BXA9 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC4.5□□□□□ -1.69
SALL3Q9BXA9 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
SALL3Q9BXA9 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC4.5□□□□□ -1.69
SALL3Q9BXA9 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
SALL3Q9BXA9 AC073073.2-201ENST00000609827 2578 ntBASIC4.5□□□□□ -1.69
SALL3Q9BXA9 SAGE2P-201ENST00000420011 2126 ntBASIC4.5□□□□□ -1.69
SALL3Q9BXA9 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
SALL3Q9BXA9 AC006378.2-201ENST00000623178 2476 ntBASIC4.5□□□□□ -1.69
SALL3Q9BXA9 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC4.5□□□□□ -1.69
SALL3Q9BXA9 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
SALL3Q9BXA9 RNA5SP124-201ENST00000362739 110 ntBASIC4.49□□□□□ -1.69
SALL3Q9BXA9 Y_RNA.89-201ENST00000363031 102 ntBASIC4.49□□□□□ -1.69
SALL3Q9BXA9 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC4.49□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 105.2 ms