Protein–RNA interactions for Protein: Q99990

VGLL1, Transcription cofactor vestigial-like protein 1, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL1Q99990 AL021368.2-201ENST00000606125 5352 ntBASIC2.99□□□□□ -1.93
VGLL1Q99990 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
VGLL1Q99990 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC2.99□□□□□ -1.93
VGLL1Q99990 AC006504.1-201ENST00000562493 3666 ntBASIC2.99□□□□□ -1.93
VGLL1Q99990 GNG5P1-201ENST00000255500 204 ntBASIC2.99□□□□□ -1.93
VGLL1Q99990 SNORA60-201ENST00000362396 134 ntBASIC2.99□□□□□ -1.93
VGLL1Q99990 Y_RNA.372-201ENST00000365599 102 ntBASIC2.99□□□□□ -1.93
VGLL1Q99990 Y_RNA.450-201ENST00000384198 113 ntBASIC2.99□□□□□ -1.93
VGLL1Q99990 HMGN2P8-201ENST00000391458 268 ntBASIC2.99□□□□□ -1.93
VGLL1Q99990 MTCO3P40-201ENST00000392516 676 ntBASIC2.99□□□□□ -1.93
VGLL1Q99990 BTBD10P2-201ENST00000404779 676 ntBASIC2.99□□□□□ -1.93
VGLL1Q99990 CCNG1P1-201ENST00000406783 885 ntBASIC2.99□□□□□ -1.93
VGLL1Q99990 HSPE1P12-201ENST00000412576 301 ntBASIC2.99□□□□□ -1.93
VGLL1Q99990 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC2.99□□□□□ -1.93
VGLL1Q99990 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC2.99□□□□□ -1.93
VGLL1Q99990 USP9YP6-201ENST00000413550 854 ntBASIC2.99□□□□□ -1.93
VGLL1Q99990 SPA17P1-201ENST00000416656 452 ntBASIC2.99□□□□□ -1.93
VGLL1Q99990 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC2.99□□□□□ -1.93
VGLL1Q99990 ISCA1P6-201ENST00000427740 390 ntBASIC2.99□□□□□ -1.93
VGLL1Q99990 ARF4P2-201ENST00000430209 526 ntBASIC2.99□□□□□ -1.93
VGLL1Q99990 BTF3P10-201ENST00000433415 495 ntBASIC2.99□□□□□ -1.93
VGLL1Q99990 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC2.99□□□□□ -1.93
VGLL1Q99990 AC127537.2-201ENST00000439258 465 ntBASIC2.99□□□□□ -1.93
VGLL1Q99990 HMGB1P37-201ENST00000439613 609 ntBASIC2.99□□□□□ -1.93
VGLL1Q99990 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC2.99□□□□□ -1.93
VGLL1Q99990 AL500522.2-201ENST00000448562 343 ntBASIC2.99□□□□□ -1.93
VGLL1Q99990 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC2.99□□□□□ -1.93
VGLL1Q99990 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC2.99□□□□□ -1.93
VGLL1Q99990 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC2.99□□□□□ -1.93
VGLL1Q99990 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC2.99□□□□□ -1.93
VGLL1Q99990 AC027673.1-201ENST00000456245 405 ntBASIC2.99□□□□□ -1.93
VGLL1Q99990 AL359385.1-201ENST00000456509 365 ntBASIC2.99□□□□□ -1.93
VGLL1Q99990 RBM43P1-201ENST00000476891 1081 ntBASIC2.99□□□□□ -1.93
VGLL1Q99990 AP001025.2-201ENST00000490908 477 ntBASIC2.99□□□□□ -1.93
VGLL1Q99990 HMGB1P29-201ENST00000505659 499 ntBASIC2.99□□□□□ -1.93
VGLL1Q99990 AC108475.1-201ENST00000507880 950 ntBASIC2.99□□□□□ -1.93
VGLL1Q99990 TXNP6-201ENST00000510190 310 ntBASIC2.99□□□□□ -1.93
VGLL1Q99990 SAP18P1-201ENST00000512058 390 ntBASIC2.99□□□□□ -1.93
VGLL1Q99990 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC2.99□□□□□ -1.93
VGLL1Q99990 Y_RNA.672-201ENST00000516289 104 ntBASIC2.99□□□□□ -1.93
VGLL1Q99990 RNU4ATAC10P-201ENST00000516967 122 ntBASIC2.99□□□□□ -1.93
VGLL1Q99990 AC022616.6-201ENST00000520479 119 ntBASIC2.99□□□□□ -1.93
VGLL1Q99990 FAM92A1P1-201ENST00000528023 890 ntBASIC2.99□□□□□ -1.93
VGLL1Q99990 AC009643.1-201ENST00000532030 391 ntBASIC2.99□□□□□ -1.93
VGLL1Q99990 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC2.99□□□□□ -1.93
VGLL1Q99990 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC2.99□□□□□ -1.93
VGLL1Q99990 AC123904.2-201ENST00000548059 300 ntBASIC2.99□□□□□ -1.93
VGLL1Q99990 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC2.99□□□□□ -1.93
VGLL1Q99990 AC107954.1-201ENST00000565906 727 ntBASIC2.99□□□□□ -1.93
VGLL1Q99990 AL391840.1-201ENST00000571144 367 ntBASIC2.99□□□□□ -1.93
VGLL1Q99990 AC034268.2-201ENST00000571784 482 ntBASIC2.99□□□□□ -1.93
VGLL1Q99990 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC2.99□□□□□ -1.93
VGLL1Q99990 MIR3118-1-201ENST00000581787 76 ntBASIC2.99□□□□□ -1.93
VGLL1Q99990 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC2.99□□□□□ -1.93
VGLL1Q99990 AC010680.3-201ENST00000604215 520 ntBASIC2.99□□□□□ -1.93
VGLL1Q99990 AL359999.1-201ENST00000604513 294 ntBASIC2.99□□□□□ -1.93
VGLL1Q99990 AL592436.1-201ENST00000605135 558 ntBASIC2.99□□□□□ -1.93
VGLL1Q99990 AL355472.4-201ENST00000610233 626 ntBASIC2.99□□□□□ -1.93
VGLL1Q99990 MIR7151-201ENST00000617477 60 ntBASIC2.99□□□□□ -1.93
VGLL1Q99990 AC009159.1-201ENST00000618386 642 ntBASIC2.99□□□□□ -1.93
VGLL1Q99990 AL596245.1-201ENST00000618994 362 ntBASIC2.99□□□□□ -1.93
VGLL1Q99990 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC2.99□□□□□ -1.93
VGLL1Q99990 AC110994.2-201ENST00000635481 492 ntBASIC2.99□□□□□ -1.93
VGLL1Q99990 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC2.99□□□□□ -1.93
VGLL1Q99990 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC2.99□□□□□ -1.93
VGLL1Q99990 AL139811.1-201ENST00000424779 2299 ntBASIC2.99□□□□□ -1.93
VGLL1Q99990 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
VGLL1Q99990 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC2.98□□□□□ -1.93
VGLL1Q99990 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
VGLL1Q99990 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
VGLL1Q99990 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC2.98□□□□□ -1.93
VGLL1Q99990 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
VGLL1Q99990 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
VGLL1Q99990 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC2.98□□□□□ -1.93
VGLL1Q99990 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
VGLL1Q99990 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC2.98□□□□□ -1.93
VGLL1Q99990 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
VGLL1Q99990 AL161781.1-201ENST00000354277 403 ntBASIC2.98□□□□□ -1.93
VGLL1Q99990 RNU6-28P-201ENST00000362378 107 ntBASIC2.98□□□□□ -1.93
VGLL1Q99990 RNU6-853P-201ENST00000364306 107 ntBASIC2.98□□□□□ -1.93
VGLL1Q99990 Y_RNA.234-201ENST00000364409 97 ntBASIC2.98□□□□□ -1.93
VGLL1Q99990 RNU6-867P-201ENST00000364956 107 ntBASIC2.98□□□□□ -1.93
VGLL1Q99990 SNORD82-201ENST00000365530 70 ntBASIC2.98□□□□□ -1.93
VGLL1Q99990 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC2.98□□□□□ -1.93
VGLL1Q99990 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC2.98□□□□□ -1.93
VGLL1Q99990 U3.29-201ENST00000391296 212 ntBASIC2.98□□□□□ -1.93
VGLL1Q99990 RPL7AP73-201ENST00000413490 353 ntBASIC2.98□□□□□ -1.93
VGLL1Q99990 RPL26P29-201ENST00000415623 438 ntBASIC2.98□□□□□ -1.93
VGLL1Q99990 MTATP6P27-201ENST00000416987 621 ntBASIC2.98□□□□□ -1.93
VGLL1Q99990 RPS15AP40-201ENST00000419621 391 ntBASIC2.98□□□□□ -1.93
VGLL1Q99990 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC2.98□□□□□ -1.93
VGLL1Q99990 MTCYBP24-201ENST00000420387 1106 ntBASIC2.98□□□□□ -1.93
VGLL1Q99990 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC2.98□□□□□ -1.93
VGLL1Q99990 PIGFP2-201ENST00000421400 651 ntBASIC2.98□□□□□ -1.93
VGLL1Q99990 AC092832.1-201ENST00000422934 400 ntBASIC2.98□□□□□ -1.93
VGLL1Q99990 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
VGLL1Q99990 AL732292.1-201ENST00000426692 226 ntBASIC2.98□□□□□ -1.93
VGLL1Q99990 AC073464.1-201ENST00000429823 534 ntBASIC2.98□□□□□ -1.93
VGLL1Q99990 NEK4P1-201ENST00000433383 879 ntBASIC2.98□□□□□ -1.93
VGLL1Q99990 AC104850.1-201ENST00000435940 476 ntBASIC2.98□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 141 ms