Protein–RNA interactions for Protein: Q99569

PKP4, Plakophilin-4, humanhuman

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4Q99569 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
PKP4Q99569 AC010342.1-201ENST00000514047 877 ntBASIC3.72□□□□□ -1.81
PKP4Q99569 SCARNA14-201ENST00000516903 136 ntBASIC3.72□□□□□ -1.81
PKP4Q99569 AP002453.2-201ENST00000533503 320 ntBASIC3.72□□□□□ -1.81
PKP4Q99569 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC3.72□□□□□ -1.81
PKP4Q99569 AL121603.1-201ENST00000553815 142 ntBASIC3.72□□□□□ -1.81
PKP4Q99569 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC3.72□□□□□ -1.81
PKP4Q99569 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC3.72□□□□□ -1.81
PKP4Q99569 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC3.72□□□□□ -1.81
PKP4Q99569 AC009063.1-201ENST00000563342 702 ntBASIC3.72□□□□□ -1.81
PKP4Q99569 AL360157.1-201ENST00000565962 87 ntBASIC3.72□□□□□ -1.81
PKP4Q99569 AC234778.2-201ENST00000566241 354 ntBASIC3.72□□□□□ -1.81
PKP4Q99569 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC3.72□□□□□ -1.81
PKP4Q99569 MIR4528-201ENST00000577763 90 ntBASIC3.72□□□□□ -1.81
PKP4Q99569 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC3.72□□□□□ -1.81
PKP4Q99569 AL109618.2-201ENST00000605527 211 ntBASIC3.72□□□□□ -1.81
PKP4Q99569 AL159169.3-201ENST00000608871 561 ntBASIC3.72□□□□□ -1.81
PKP4Q99569 AC006566.1-201ENST00000608943 513 ntBASIC3.72□□□□□ -1.81
PKP4Q99569 AP001521.1-201ENST00000609150 300 ntBASIC3.72□□□□□ -1.81
PKP4Q99569 AC007684.1-201ENST00000609671 477 ntBASIC3.72□□□□□ -1.81
PKP4Q99569 U6.42-201ENST00000618440 107 ntBASIC3.72□□□□□ -1.81
PKP4Q99569 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC3.72□□□□□ -1.81
PKP4Q99569 AL354798.1-201ENST00000622505 329 ntBASIC3.72□□□□□ -1.81
PKP4Q99569 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC3.72□□□□□ -1.81
PKP4Q99569 SEPT14P19-203ENST00000633205 211 ntBASIC3.72□□□□□ -1.81
PKP4Q99569 FTO-223ENST00000640179 210 ntTSL 5 BASIC3.72□□□□□ -1.81
PKP4Q99569 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.72□□□□□ -1.81
PKP4Q99569 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
PKP4Q99569 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
PKP4Q99569 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
PKP4Q99569 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
PKP4Q99569 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
PKP4Q99569 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
PKP4Q99569 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.81
PKP4Q99569 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.81
PKP4Q99569 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.71□□□□□ -1.82
PKP4Q99569 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
PKP4Q99569 AL672296.1-201ENST00000427780 2158 ntBASIC3.71□□□□□ -1.82
PKP4Q99569 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
PKP4Q99569 SNRPEP3-201ENST00000338402 276 ntBASIC3.71□□□□□ -1.82
PKP4Q99569 RNU5F-6P-201ENST00000362979 116 ntBASIC3.71□□□□□ -1.82
PKP4Q99569 RNU6-1249P-201ENST00000363237 111 ntBASIC3.71□□□□□ -1.82
PKP4Q99569 SNORA57.1-201ENST00000391227 145 ntBASIC3.71□□□□□ -1.82
PKP4Q99569 HLFP1-201ENST00000402375 499 ntBASIC3.71□□□□□ -1.82
PKP4Q99569 SNORA3.3-201ENST00000408712 125 ntBASIC3.71□□□□□ -1.82
PKP4Q99569 NAP1L1P2-201ENST00000414182 1089 ntBASIC3.71□□□□□ -1.82
PKP4Q99569 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC3.71□□□□□ -1.82
PKP4Q99569 RPS27AP14-201ENST00000422868 454 ntBASIC3.71□□□□□ -1.82
PKP4Q99569 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC3.71□□□□□ -1.82
PKP4Q99569 RPS29P7-201ENST00000439662 171 ntBASIC3.71□□□□□ -1.82
PKP4Q99569 AL353572.1-201ENST00000442490 417 ntBASIC3.71□□□□□ -1.82
PKP4Q99569 RPL7P52-201ENST00000449200 742 ntBASIC3.71□□□□□ -1.82
PKP4Q99569 AC093392.2-201ENST00000450682 337 ntBASIC3.71□□□□□ -1.82
PKP4Q99569 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC3.71□□□□□ -1.82
PKP4Q99569 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC3.71□□□□□ -1.82
PKP4Q99569 SNRPFP4-201ENST00000456366 242 ntBASIC3.71□□□□□ -1.82
PKP4Q99569 TRBV12-2-201ENST00000489763 344 ntBASIC3.71□□□□□ -1.82
PKP4Q99569 AC108941.1-201ENST00000502853 530 ntBASIC3.71□□□□□ -1.82
PKP4Q99569 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC3.71□□□□□ -1.82
PKP4Q99569 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC3.71□□□□□ -1.82
PKP4Q99569 RNA5SP208-201ENST00000516156 78 ntBASIC3.71□□□□□ -1.82
PKP4Q99569 MIR2114-201ENST00000516645 80 ntBASIC3.71□□□□□ -1.82
PKP4Q99569 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
PKP4Q99569 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC3.71□□□□□ -1.82
PKP4Q99569 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.71□□□□□ -1.82
PKP4Q99569 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC3.71□□□□□ -1.82
PKP4Q99569 AL389895.1-201ENST00000554127 252 ntBASIC3.71□□□□□ -1.82
PKP4Q99569 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC3.71□□□□□ -1.82
PKP4Q99569 AC091489.2-201ENST00000566263 604 ntBASIC3.71□□□□□ -1.82
PKP4Q99569 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC3.71□□□□□ -1.82
PKP4Q99569 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC3.71□□□□□ -1.82
PKP4Q99569 AC022916.3-201ENST00000592961 742 ntBASIC3.71□□□□□ -1.82
PKP4Q99569 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC3.71□□□□□ -1.82
PKP4Q99569 VN1R85P-201ENST00000601587 426 ntBASIC3.71□□□□□ -1.82
PKP4Q99569 SEPT7P9-203ENST00000604116 343 ntBASIC3.71□□□□□ -1.82
PKP4Q99569 AC006329.2-201ENST00000611491 394 ntBASIC3.71□□□□□ -1.82
PKP4Q99569 U4.5-201ENST00000617137 123 ntBASIC3.71□□□□□ -1.82
PKP4Q99569 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
PKP4Q99569 AC079684.1-201ENST00000621405 437 ntBASIC3.71□□□□□ -1.82
PKP4Q99569 HSPA8P1-201ENST00000425843 1833 ntBASIC3.71□□□□□ -1.82
PKP4Q99569 MTND4P16-201ENST00000466108 1367 ntBASIC3.71□□□□□ -1.82
PKP4Q99569 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
PKP4Q99569 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
PKP4Q99569 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC3.71□□□□□ -1.82
PKP4Q99569 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC3.71□□□□□ -1.82
PKP4Q99569 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
PKP4Q99569 MAPK10-373ENST00000641983 6772 ntBASIC3.71□□□□□ -1.82
PKP4Q99569 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC3.7□□□□□ -1.82
PKP4Q99569 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
PKP4Q99569 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
PKP4Q99569 SNORD82-201ENST00000365530 70 ntBASIC3.7□□□□□ -1.82
PKP4Q99569 RNU1-89P-201ENST00000384592 164 ntBASIC3.7□□□□□ -1.82
PKP4Q99569 AC025750.1-201ENST00000399891 379 ntBASIC3.7□□□□□ -1.82
PKP4Q99569 MTCYBP36-201ENST00000404146 440 ntBASIC3.7□□□□□ -1.82
PKP4Q99569 AP000567.1-201ENST00000406413 156 ntBASIC3.7□□□□□ -1.82
PKP4Q99569 MTND1P21-201ENST00000412991 285 ntBASIC3.7□□□□□ -1.82
PKP4Q99569 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC3.7□□□□□ -1.82
PKP4Q99569 ISCA1P1-201ENST00000426679 387 ntBASIC3.7□□□□□ -1.82
PKP4Q99569 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC3.7□□□□□ -1.82
PKP4Q99569 ZYG11AP1-201ENST00000430329 837 ntBASIC3.7□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 86.2 ms