Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
SHKBP1Q8TBC3 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
SHKBP1Q8TBC3 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
SHKBP1Q8TBC3 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC5.23□□□□□ -1.57
SHKBP1Q8TBC3 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
SHKBP1Q8TBC3 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
SHKBP1Q8TBC3 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
SHKBP1Q8TBC3 FOXP2-203ENST00000378237 2187 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
SHKBP1Q8TBC3 AC099654.2-201ENST00000433031 1980 ntBASIC5.22□□□□□ -1.57
SHKBP1Q8TBC3 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
SHKBP1Q8TBC3 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC5.22□□□□□ -1.57
SHKBP1Q8TBC3 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC5.22□□□□□ -1.57
SHKBP1Q8TBC3 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
SHKBP1Q8TBC3 AC079741.1-201ENST00000321498 212 ntBASIC5.22□□□□□ -1.57
SHKBP1Q8TBC3 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
SHKBP1Q8TBC3 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
SHKBP1Q8TBC3 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
SHKBP1Q8TBC3 Y_RNA.473-201ENST00000384333 102 ntBASIC5.22□□□□□ -1.57
SHKBP1Q8TBC3 RNU6-713P-201ENST00000384761 107 ntBASIC5.22□□□□□ -1.57
SHKBP1Q8TBC3 MT-TW-201ENST00000387382 68 ntBASIC5.22□□□□□ -1.57
SHKBP1Q8TBC3 RPL21P1-201ENST00000399532 476 ntBASIC5.22□□□□□ -1.57
SHKBP1Q8TBC3 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
SHKBP1Q8TBC3 Y_RNA.594-201ENST00000410373 140 ntBASIC5.22□□□□□ -1.57
SHKBP1Q8TBC3 RNU6-1050P-201ENST00000410388 107 ntBASIC5.22□□□□□ -1.57
SHKBP1Q8TBC3 AC017078.1-201ENST00000416146 368 ntBASIC5.22□□□□□ -1.57
SHKBP1Q8TBC3 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC5.22□□□□□ -1.57
SHKBP1Q8TBC3 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC5.22□□□□□ -1.57
SHKBP1Q8TBC3 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC5.22□□□□□ -1.57
SHKBP1Q8TBC3 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC5.22□□□□□ -1.57
SHKBP1Q8TBC3 AC139712.2-201ENST00000424302 339 ntBASIC5.22□□□□□ -1.57
SHKBP1Q8TBC3 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC5.22□□□□□ -1.57
SHKBP1Q8TBC3 RPS15AP10-201ENST00000432472 382 ntBASIC5.22□□□□□ -1.57
SHKBP1Q8TBC3 RPS29P9-201ENST00000440360 171 ntBASIC5.22□□□□□ -1.57
SHKBP1Q8TBC3 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC5.22□□□□□ -1.57
SHKBP1Q8TBC3 GAS5-223ENST00000452197 483 ntTSL 3 BASIC5.22□□□□□ -1.57
SHKBP1Q8TBC3 AC112492.4-201ENST00000456549 352 ntBASIC5.22□□□□□ -1.57
SHKBP1Q8TBC3 AC079804.1-201ENST00000461922 436 ntBASIC5.22□□□□□ -1.57
SHKBP1Q8TBC3 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC5.22□□□□□ -1.57
SHKBP1Q8TBC3 AC020893.1-201ENST00000502452 580 ntBASIC5.22□□□□□ -1.57
SHKBP1Q8TBC3 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC5.22□□□□□ -1.57
SHKBP1Q8TBC3 AC025465.3-201ENST00000510570 311 ntBASIC5.22□□□□□ -1.57
SHKBP1Q8TBC3 AC098976.1-201ENST00000513014 541 ntBASIC5.22□□□□□ -1.57
SHKBP1Q8TBC3 RNU4-77P-201ENST00000516692 156 ntBASIC5.22□□□□□ -1.57
SHKBP1Q8TBC3 AC012339.2-201ENST00000523996 453 ntBASIC5.22□□□□□ -1.57
SHKBP1Q8TBC3 AP006289.1-201ENST00000538089 277 ntBASIC5.22□□□□□ -1.57
SHKBP1Q8TBC3 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
SHKBP1Q8TBC3 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC5.22□□□□□ -1.57
SHKBP1Q8TBC3 HMGB3P26-201ENST00000560051 582 ntBASIC5.22□□□□□ -1.57
SHKBP1Q8TBC3 AC018552.1-201ENST00000562099 811 ntBASIC5.22□□□□□ -1.57
SHKBP1Q8TBC3 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC5.22□□□□□ -1.57
SHKBP1Q8TBC3 AC009852.2-201ENST00000567898 485 ntBASIC5.22□□□□□ -1.57
SHKBP1Q8TBC3 MIR4433B-201ENST00000581329 102 ntBASIC5.22□□□□□ -1.57
SHKBP1Q8TBC3 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC5.22□□□□□ -1.57
SHKBP1Q8TBC3 AC020910.3-201ENST00000603701 874 ntBASIC5.22□□□□□ -1.57
SHKBP1Q8TBC3 SNORD58B-201ENST00000607313 66 ntBASIC5.22□□□□□ -1.57
SHKBP1Q8TBC3 MIR378J-201ENST00000611988 109 ntBASIC5.22□□□□□ -1.57
SHKBP1Q8TBC3 DUSP12P1-201ENST00000612874 516 ntBASIC5.22□□□□□ -1.57
SHKBP1Q8TBC3 AC103705.1-201ENST00000619013 241 ntBASIC5.22□□□□□ -1.57
SHKBP1Q8TBC3 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC5.22□□□□□ -1.57
SHKBP1Q8TBC3 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC5.22□□□□□ -1.57
SHKBP1Q8TBC3 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
SHKBP1Q8TBC3 AC011460.1-201ENST00000636268 1834 ntBASIC5.22□□□□□ -1.57
SHKBP1Q8TBC3 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC5.22□□□□□ -1.57
SHKBP1Q8TBC3 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
SHKBP1Q8TBC3 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC5.22□□□□□ -1.57
SHKBP1Q8TBC3 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
SHKBP1Q8TBC3 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC5.22□□□□□ -1.57
SHKBP1Q8TBC3 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
SHKBP1Q8TBC3 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
SHKBP1Q8TBC3 CASC19-284ENST00000642142 1868 ntBASIC5.22□□□□□ -1.57
SHKBP1Q8TBC3 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
SHKBP1Q8TBC3 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
SHKBP1Q8TBC3 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC5.21□□□□□ -1.58
SHKBP1Q8TBC3 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC5.21□□□□□ -1.58
SHKBP1Q8TBC3 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
SHKBP1Q8TBC3 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
SHKBP1Q8TBC3 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
SHKBP1Q8TBC3 RNU5A-8P-201ENST00000364102 114 ntBASIC5.21□□□□□ -1.58
SHKBP1Q8TBC3 RNU1-85P-201ENST00000364127 164 ntBASIC5.21□□□□□ -1.58
SHKBP1Q8TBC3 SNORA20.1-201ENST00000364790 130 ntBASIC5.21□□□□□ -1.58
SHKBP1Q8TBC3 SNORA70.10-201ENST00000384515 134 ntBASIC5.21□□□□□ -1.58
SHKBP1Q8TBC3 U3.20-201ENST00000390909 217 ntBASIC5.21□□□□□ -1.58
SHKBP1Q8TBC3 RNU2-50P-201ENST00000410494 143 ntBASIC5.21□□□□□ -1.58
SHKBP1Q8TBC3 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC5.21□□□□□ -1.58
SHKBP1Q8TBC3 AC108734.1-201ENST00000439549 399 ntBASIC5.21□□□□□ -1.58
SHKBP1Q8TBC3 RPL23AP43-201ENST00000446445 471 ntBASIC5.21□□□□□ -1.58
SHKBP1Q8TBC3 AL162388.1-201ENST00000450912 352 ntBASIC5.21□□□□□ -1.58
SHKBP1Q8TBC3 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC5.21□□□□□ -1.58
SHKBP1Q8TBC3 RN7SL346P-201ENST00000491561 294 ntBASIC5.21□□□□□ -1.58
SHKBP1Q8TBC3 AC023424.1-201ENST00000496058 459 ntBASIC5.21□□□□□ -1.58
SHKBP1Q8TBC3 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC5.21□□□□□ -1.58
SHKBP1Q8TBC3 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC5.21□□□□□ -1.58
SHKBP1Q8TBC3 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC5.21□□□□□ -1.58
SHKBP1Q8TBC3 AC022616.4-201ENST00000522985 181 ntBASIC5.21□□□□□ -1.58
SHKBP1Q8TBC3 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC5.21□□□□□ -1.58
SHKBP1Q8TBC3 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC5.21□□□□□ -1.58
SHKBP1Q8TBC3 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC5.21□□□□□ -1.58
SHKBP1Q8TBC3 IGHV3-29-201ENST00000604817 344 ntBASIC5.21□□□□□ -1.58
SHKBP1Q8TBC3 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC5.21□□□□□ -1.58
SHKBP1Q8TBC3 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 93 ms