Protein–RNA interactions for Protein: Q8TAD8

SNIP1, Smad nuclear-interacting protein 1, humanhuman

Known RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1Q8TAD8 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
SNIP1Q8TAD8 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC5.7□□□□□ -1.5
SNIP1Q8TAD8 ODF2-205ENST00000393527 3653 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
SNIP1Q8TAD8 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
SNIP1Q8TAD8 AL161901.1-201ENST00000624954 3425 ntBASIC5.7□□□□□ -1.5
SNIP1Q8TAD8 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
SNIP1Q8TAD8 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
SNIP1Q8TAD8 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC5.7□□□□□ -1.5
SNIP1Q8TAD8 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
SNIP1Q8TAD8 BDNF-205ENST00000395981 4071 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
SNIP1Q8TAD8 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
SNIP1Q8TAD8 AL136531.3-201ENST00000624378 3658 ntBASIC5.7□□□□□ -1.5
SNIP1Q8TAD8 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC5.7□□□□□ -1.5
SNIP1Q8TAD8 RNU6-288P-201ENST00000363690 104 ntBASIC5.7□□□□□ -1.5
SNIP1Q8TAD8 RN7SKP128-201ENST00000364270 303 ntBASIC5.7□□□□□ -1.5
SNIP1Q8TAD8 RN7SKP124-201ENST00000364730 341 ntBASIC5.7□□□□□ -1.5
SNIP1Q8TAD8 AL133270.1-201ENST00000402635 279 ntBASIC5.7□□□□□ -1.5
SNIP1Q8TAD8 NME1P1-201ENST00000420914 382 ntBASIC5.7□□□□□ -1.5
SNIP1Q8TAD8 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
SNIP1Q8TAD8 CFL1P1-202ENST00000432948 411 ntBASIC5.7□□□□□ -1.5
SNIP1Q8TAD8 AC004938.1-201ENST00000438468 308 ntBASIC5.7□□□□□ -1.5
SNIP1Q8TAD8 AL162389.1-201ENST00000449233 177 ntBASIC5.7□□□□□ -1.5
SNIP1Q8TAD8 AC010655.1-201ENST00000449336 292 ntBASIC5.7□□□□□ -1.5
SNIP1Q8TAD8 NUTF2P7-201ENST00000453086 375 ntBASIC5.7□□□□□ -1.5
SNIP1Q8TAD8 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
SNIP1Q8TAD8 AC114728.1-201ENST00000488289 483 ntBASIC5.7□□□□□ -1.5
SNIP1Q8TAD8 RN7SL57P-201ENST00000493687 290 ntBASIC5.7□□□□□ -1.5
SNIP1Q8TAD8 RNU6-352P-201ENST00000516908 107 ntBASIC5.7□□□□□ -1.5
SNIP1Q8TAD8 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC5.7□□□□□ -1.5
SNIP1Q8TAD8 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC5.7□□□□□ -1.5
SNIP1Q8TAD8 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC5.7□□□□□ -1.5
SNIP1Q8TAD8 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC5.7□□□□□ -1.5
SNIP1Q8TAD8 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
SNIP1Q8TAD8 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC5.7□□□□□ -1.5
SNIP1Q8TAD8 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC5.7□□□□□ -1.5
SNIP1Q8TAD8 CU639417.4-201ENST00000623928 207 ntBASIC5.7□□□□□ -1.5
SNIP1Q8TAD8 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
SNIP1Q8TAD8 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
SNIP1Q8TAD8 CLIP4-202ENST00000401605 2322 ntTSL 2 BASIC5.7□□□□□ -1.5
SNIP1Q8TAD8 ERI2-206ENST00000563117 2903 ntTSL 2 BASIC5.7□□□□□ -1.5
SNIP1Q8TAD8 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC5.7□□□□□ -1.5
SNIP1Q8TAD8 XRCC5-201ENST00000392132 3428 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
SNIP1Q8TAD8 AC127164.1-201ENST00000548738 4196 ntTSL 2 BASIC5.7□□□□□ -1.5
SNIP1Q8TAD8 CYBB-201ENST00000378588 4324 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
SNIP1Q8TAD8 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
SNIP1Q8TAD8 FMO4-201ENST00000367749 2252 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
SNIP1Q8TAD8 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC5.69□□□□□ -1.5
SNIP1Q8TAD8 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC5.69□□□□□ -1.5
SNIP1Q8TAD8 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
SNIP1Q8TAD8 AL445487.1-201ENST00000415694 1580 ntBASIC5.69□□□□□ -1.5
SNIP1Q8TAD8 AC005225.5-201ENST00000623547 2225 ntBASIC5.69□□□□□ -1.5
SNIP1Q8TAD8 POC1B-201ENST00000313546 3001 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
SNIP1Q8TAD8 SELENOWP1-201ENST00000322792 252 ntBASIC5.69□□□□□ -1.5
SNIP1Q8TAD8 Y_RNA.286-201ENST00000364813 102 ntBASIC5.69□□□□□ -1.5
SNIP1Q8TAD8 SNORA43.1-201ENST00000364863 140 ntBASIC5.69□□□□□ -1.5
SNIP1Q8TAD8 RNU6-14P-201ENST00000384630 106 ntBASIC5.69□□□□□ -1.5
SNIP1Q8TAD8 MIR585-201ENST00000384887 94 ntBASIC5.69□□□□□ -1.5
SNIP1Q8TAD8 U3.29-201ENST00000391296 212 ntBASIC5.69□□□□□ -1.5
SNIP1Q8TAD8 AL121835.1-201ENST00000404250 354 ntBASIC5.69□□□□□ -1.5
SNIP1Q8TAD8 HSPE1P8-201ENST00000406997 288 ntBASIC5.69□□□□□ -1.5
SNIP1Q8TAD8 AL096829.1-201ENST00000413677 457 ntBASIC5.69□□□□□ -1.5
SNIP1Q8TAD8 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC5.69□□□□□ -1.5
SNIP1Q8TAD8 CYCSP43-201ENST00000438233 310 ntBASIC5.69□□□□□ -1.5
SNIP1Q8TAD8 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC5.69□□□□□ -1.5
SNIP1Q8TAD8 U8.22-201ENST00000459141 133 ntBASIC5.69□□□□□ -1.5
SNIP1Q8TAD8 C1orf105-204ENST00000460397 462 ntTSL 3 BASIC5.69□□□□□ -1.5
SNIP1Q8TAD8 RN7SL860P-201ENST00000473738 223 ntBASIC5.69□□□□□ -1.5
SNIP1Q8TAD8 RN7SL184P-201ENST00000488308 297 ntBASIC5.69□□□□□ -1.5
SNIP1Q8TAD8 RNU6-390P-201ENST00000516259 103 ntBASIC5.69□□□□□ -1.5
SNIP1Q8TAD8 SNORD116-25-201ENST00000516517 92 ntBASIC5.69□□□□□ -1.5
SNIP1Q8TAD8 CASP1P1-201ENST00000526345 212 ntBASIC5.69□□□□□ -1.5
SNIP1Q8TAD8 HMGN2P36-201ENST00000529541 409 ntBASIC5.69□□□□□ -1.5
SNIP1Q8TAD8 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC5.69□□□□□ -1.5
SNIP1Q8TAD8 AC092470.1-201ENST00000546187 132 ntBASIC5.69□□□□□ -1.5
SNIP1Q8TAD8 IGBP1P1-201ENST00000554337 1009 ntBASIC5.69□□□□□ -1.5
SNIP1Q8TAD8 OR1F2P-201ENST00000570470 933 ntBASIC5.69□□□□□ -1.5
SNIP1Q8TAD8 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC5.69□□□□□ -1.5
SNIP1Q8TAD8 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC5.69□□□□□ -1.5
SNIP1Q8TAD8 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
SNIP1Q8TAD8 SEMA3A-204ENST00000436949 2550 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
SNIP1Q8TAD8 ZNF615-204ENST00000594083 4020 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
SNIP1Q8TAD8 CNTNAP4-205ENST00000476707 4355 ntTSL 2 BASIC5.69□□□□□ -1.5
SNIP1Q8TAD8 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
SNIP1Q8TAD8 ZNF329-201ENST00000358067 3290 ntAPPRIS P1 TSL 2 BASIC5.69□□□□□ -1.5
SNIP1Q8TAD8 AL137141.1-201ENST00000624622 4836 ntBASIC5.69□□□□□ -1.5
SNIP1Q8TAD8 LDAH-212ENST00000619656 3663 ntTSL 2 BASIC5.69□□□□□ -1.5
SNIP1Q8TAD8 IL31RA-202ENST00000354961 2658 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
SNIP1Q8TAD8 ZNF26-202ENST00000534834 4853 ntAPPRIS ALT2 TSL 2 BASIC5.69□□□□□ -1.5
SNIP1Q8TAD8 DAZ1-201ENST00000382510 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
SNIP1Q8TAD8 ZNF92-201ENST00000328747 3210 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
SNIP1Q8TAD8 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC5.68□□□□□ -1.5
SNIP1Q8TAD8 BTBD10P1-201ENST00000549824 1352 ntBASIC5.68□□□□□ -1.5
SNIP1Q8TAD8 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC5.68□□□□□ -1.5
SNIP1Q8TAD8 AC009229.4-201ENST00000623854 1947 ntBASIC5.68□□□□□ -1.5
SNIP1Q8TAD8 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
SNIP1Q8TAD8 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
SNIP1Q8TAD8 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC5.68□□□□□ -1.5
SNIP1Q8TAD8 RFX4-203ENST00000392842 3955 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
SNIP1Q8TAD8 RNA5SP478-201ENST00000364657 115 ntBASIC5.68□□□□□ -1.5
SNIP1Q8TAD8 Y_RNA.569-201ENST00000384749 103 ntBASIC5.68□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 123.9 ms