Protein–RNA interactions for Protein: Q8NEB9

PIK3C3, Phosphatidylinositol 3-kinase catalytic subunit type 3, humanhuman

Predictions only

Length 887 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PIK3C3Q8NEB9 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
PIK3C3Q8NEB9 AC004972.1-201ENST00000623934 2209 ntBASIC4.38□□□□□ -1.71
PIK3C3Q8NEB9 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
PIK3C3Q8NEB9 AL356489.2-201ENST00000566968 3528 ntBASIC4.38□□□□□ -1.71
PIK3C3Q8NEB9 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
PIK3C3Q8NEB9 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
PIK3C3Q8NEB9 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC4.38□□□□□ -1.71
PIK3C3Q8NEB9 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.37□□□□□ -1.71
PIK3C3Q8NEB9 FAM91A3P-201ENST00000456826 2544 ntBASIC4.37□□□□□ -1.71
PIK3C3Q8NEB9 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
PIK3C3Q8NEB9 ATP8A2P2-201ENST00000437678 1568 ntBASIC4.37□□□□□ -1.71
PIK3C3Q8NEB9 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC4.37□□□□□ -1.71
PIK3C3Q8NEB9 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.37□□□□□ -1.71
PIK3C3Q8NEB9 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
PIK3C3Q8NEB9 RNU6-989P-201ENST00000362756 107 ntBASIC4.37□□□□□ -1.71
PIK3C3Q8NEB9 Y_RNA.231-201ENST00000364358 102 ntBASIC4.37□□□□□ -1.71
PIK3C3Q8NEB9 Y_RNA.493-201ENST00000384422 102 ntBASIC4.37□□□□□ -1.71
PIK3C3Q8NEB9 snosnR66.1-201ENST00000391095 99 ntBASIC4.37□□□□□ -1.71
PIK3C3Q8NEB9 AL136372.1-201ENST00000403060 228 ntBASIC4.37□□□□□ -1.71
PIK3C3Q8NEB9 DPPA2P3-201ENST00000411853 655 ntBASIC4.37□□□□□ -1.71
PIK3C3Q8NEB9 LAMTOR3P1-201ENST00000428620 370 ntBASIC4.37□□□□□ -1.71
PIK3C3Q8NEB9 RPL36AP6-201ENST00000435770 321 ntBASIC4.37□□□□□ -1.71
PIK3C3Q8NEB9 AC010655.1-201ENST00000449336 292 ntBASIC4.37□□□□□ -1.71
PIK3C3Q8NEB9 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC4.37□□□□□ -1.71
PIK3C3Q8NEB9 HMGN2P26-201ENST00000463169 339 ntBASIC4.37□□□□□ -1.71
PIK3C3Q8NEB9 MRPS17P3-201ENST00000465453 385 ntBASIC4.37□□□□□ -1.71
PIK3C3Q8NEB9 HMGB1P25-201ENST00000468402 607 ntBASIC4.37□□□□□ -1.71
PIK3C3Q8NEB9 AC007537.2-201ENST00000472093 511 ntBASIC4.37□□□□□ -1.71
PIK3C3Q8NEB9 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC4.37□□□□□ -1.71
PIK3C3Q8NEB9 RN7SKP219-201ENST00000516825 296 ntBASIC4.37□□□□□ -1.71
PIK3C3Q8NEB9 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC4.37□□□□□ -1.71
PIK3C3Q8NEB9 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC4.37□□□□□ -1.71
PIK3C3Q8NEB9 OR8L1P-201ENST00000534005 955 ntBASIC4.37□□□□□ -1.71
PIK3C3Q8NEB9 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC4.37□□□□□ -1.71
PIK3C3Q8NEB9 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC4.37□□□□□ -1.71
PIK3C3Q8NEB9 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC4.37□□□□□ -1.71
PIK3C3Q8NEB9 CR383656.7-201ENST00000548164 174 ntBASIC4.37□□□□□ -1.71
PIK3C3Q8NEB9 AC011611.1-201ENST00000552179 197 ntBASIC4.37□□□□□ -1.71
PIK3C3Q8NEB9 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC4.37□□□□□ -1.71
PIK3C3Q8NEB9 EDDM3DP-201ENST00000554692 434 ntBASIC4.37□□□□□ -1.71
PIK3C3Q8NEB9 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC4.37□□□□□ -1.71
PIK3C3Q8NEB9 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
PIK3C3Q8NEB9 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC4.37□□□□□ -1.71
PIK3C3Q8NEB9 AL669831.4-202ENST00000590817 238 ntBASIC4.37□□□□□ -1.71
PIK3C3Q8NEB9 AC011487.3-201ENST00000593607 453 ntBASIC4.37□□□□□ -1.71
PIK3C3Q8NEB9 AP001429.1-201ENST00000602568 530 ntBASIC4.37□□□□□ -1.71
PIK3C3Q8NEB9 AC008638.3-201ENST00000603341 463 ntBASIC4.37□□□□□ -1.71
PIK3C3Q8NEB9 AL031176.1-201ENST00000604554 466 ntBASIC4.37□□□□□ -1.71
PIK3C3Q8NEB9 AC064836.2-201ENST00000609491 462 ntBASIC4.37□□□□□ -1.71
PIK3C3Q8NEB9 AC007497.1-201ENST00000610421 561 ntBASIC4.37□□□□□ -1.71
PIK3C3Q8NEB9 uc_338.11-201ENST00000619132 160 ntBASIC4.37□□□□□ -1.71
PIK3C3Q8NEB9 AC009248.2-201ENST00000619826 254 ntBASIC4.37□□□□□ -1.71
PIK3C3Q8NEB9 AC068870.2-201ENST00000620635 389 ntBASIC4.37□□□□□ -1.71
PIK3C3Q8NEB9 AC018445.2-201ENST00000622987 260 ntBASIC4.37□□□□□ -1.71
PIK3C3Q8NEB9 AC090574.1-201ENST00000623186 233 ntBASIC4.37□□□□□ -1.71
PIK3C3Q8NEB9 LDHA-225ENST00000625635 141 ntTSL 5 BASIC4.37□□□□□ -1.71
PIK3C3Q8NEB9 VPS8-228ENST00000628962 207 ntTSL 5 BASIC4.37□□□□□ -1.71
PIK3C3Q8NEB9 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC4.37□□□□□ -1.71
PIK3C3Q8NEB9 WDR75-207ENST00000631047 270 ntTSL 5 BASIC4.37□□□□□ -1.71
PIK3C3Q8NEB9 ATM-228ENST00000639240 498 ntTSL 5 BASIC4.37□□□□□ -1.71
PIK3C3Q8NEB9 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC4.37□□□□□ -1.71
PIK3C3Q8NEB9 ATM-230ENST00000640388 578 ntTSL 5 BASIC4.37□□□□□ -1.71
PIK3C3Q8NEB9 ASNSP3-201ENST00000451989 1306 ntBASIC4.37□□□□□ -1.71
PIK3C3Q8NEB9 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
PIK3C3Q8NEB9 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
PIK3C3Q8NEB9 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC4.37□□□□□ -1.71
PIK3C3Q8NEB9 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC4.37□□□□□ -1.71
PIK3C3Q8NEB9 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
PIK3C3Q8NEB9 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC4.37□□□□□ -1.71
PIK3C3Q8NEB9 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
PIK3C3Q8NEB9 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
PIK3C3Q8NEB9 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
PIK3C3Q8NEB9 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
PIK3C3Q8NEB9 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
PIK3C3Q8NEB9 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
PIK3C3Q8NEB9 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC4.36□□□□□ -1.71
PIK3C3Q8NEB9 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
PIK3C3Q8NEB9 AC099654.2-201ENST00000433031 1980 ntBASIC4.36□□□□□ -1.71
PIK3C3Q8NEB9 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
PIK3C3Q8NEB9 AC006971.1-201ENST00000407916 4486 ntBASIC4.36□□□□□ -1.71
PIK3C3Q8NEB9 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
PIK3C3Q8NEB9 SYF2-202ENST00000354361 926 ntTSL 2 BASIC4.36□□□□□ -1.71
PIK3C3Q8NEB9 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
PIK3C3Q8NEB9 RNU4-79P-201ENST00000362764 141 ntBASIC4.36□□□□□ -1.71
PIK3C3Q8NEB9 RN7SKP115-201ENST00000363177 317 ntBASIC4.36□□□□□ -1.71
PIK3C3Q8NEB9 RHOT1P2-201ENST00000366423 333 ntBASIC4.36□□□□□ -1.71
PIK3C3Q8NEB9 RNU6-637P-201ENST00000384050 107 ntBASIC4.36□□□□□ -1.71
PIK3C3Q8NEB9 SNORA70E-201ENST00000384492 135 ntBASIC4.36□□□□□ -1.71
PIK3C3Q8NEB9 RNU11-4P-201ENST00000391149 133 ntBASIC4.36□□□□□ -1.71
PIK3C3Q8NEB9 RNU6-754P-201ENST00000391166 107 ntBASIC4.36□□□□□ -1.71
PIK3C3Q8NEB9 AL590762.2-201ENST00000395798 571 ntBASIC4.36□□□□□ -1.71
PIK3C3Q8NEB9 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
PIK3C3Q8NEB9 AL645733.1-201ENST00000402250 217 ntBASIC4.36□□□□□ -1.71
PIK3C3Q8NEB9 RNA5SP56-201ENST00000410277 118 ntBASIC4.36□□□□□ -1.71
PIK3C3Q8NEB9 RNU2-29P-201ENST00000410423 189 ntBASIC4.36□□□□□ -1.71
PIK3C3Q8NEB9 RNU2-47P-201ENST00000410649 186 ntBASIC4.36□□□□□ -1.71
PIK3C3Q8NEB9 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC4.36□□□□□ -1.71
PIK3C3Q8NEB9 AC114755.2-201ENST00000413520 361 ntBASIC4.36□□□□□ -1.71
PIK3C3Q8NEB9 AL161631.1-201ENST00000417933 486 ntBASIC4.36□□□□□ -1.71
PIK3C3Q8NEB9 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC4.36□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 96.6 ms