Protein–RNA interactions for Protein: Q8NAE3

LINC01555, Putative uncharacterized protein encoded by LINC01555, humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01555Q8NAE3 HIGD1AP13-201ENST00000509878 289 ntBASIC2.77□□□□□ -1.97
LINC01555Q8NAE3 TMEM248P1-201ENST00000510579 951 ntBASIC2.77□□□□□ -1.97
LINC01555Q8NAE3 RNU5A-4P-201ENST00000516588 111 ntBASIC2.77□□□□□ -1.97
LINC01555Q8NAE3 SCARNA13-201ENST00000516672 275 ntBASIC2.77□□□□□ -1.97
LINC01555Q8NAE3 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC2.77□□□□□ -1.97
LINC01555Q8NAE3 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC2.77□□□□□ -1.97
LINC01555Q8NAE3 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC2.77□□□□□ -1.97
LINC01555Q8NAE3 OR5D17P-201ENST00000531492 978 ntBASIC2.77□□□□□ -1.97
LINC01555Q8NAE3 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC2.77□□□□□ -1.97
LINC01555Q8NAE3 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC2.77□□□□□ -1.97
LINC01555Q8NAE3 MTCYBP27-201ENST00000555160 670 ntBASIC2.77□□□□□ -1.97
LINC01555Q8NAE3 DUXAP1-201ENST00000556632 463 ntBASIC2.77□□□□□ -1.97
LINC01555Q8NAE3 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC2.77□□□□□ -1.97
LINC01555Q8NAE3 AC009094.1-201ENST00000564443 426 ntBASIC2.77□□□□□ -1.97
LINC01555Q8NAE3 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC2.77□□□□□ -1.97
LINC01555Q8NAE3 CYCSP39-201ENST00000565821 309 ntBASIC2.77□□□□□ -1.97
LINC01555Q8NAE3 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC2.77□□□□□ -1.97
LINC01555Q8NAE3 AL354943.1-201ENST00000572103 781 ntBASIC2.77□□□□□ -1.97
LINC01555Q8NAE3 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.77□□□□□ -1.97
LINC01555Q8NAE3 AL390838.2-201ENST00000602394 274 ntBASIC2.77□□□□□ -1.97
LINC01555Q8NAE3 IGHV3-29-201ENST00000604817 344 ntBASIC2.77□□□□□ -1.97
LINC01555Q8NAE3 AL160281.1-201ENST00000605307 311 ntBASIC2.77□□□□□ -1.97
LINC01555Q8NAE3 AC097478.2-201ENST00000610572 514 ntBASIC2.77□□□□□ -1.97
LINC01555Q8NAE3 AC091304.6-201ENST00000619761 202 ntBASIC2.77□□□□□ -1.97
LINC01555Q8NAE3 AL607023.1-201ENST00000620045 248 ntBASIC2.77□□□□□ -1.97
LINC01555Q8NAE3 PLCE1P1-201ENST00000622094 305 ntBASIC2.77□□□□□ -1.97
LINC01555Q8NAE3 AC120349.2-201ENST00000625002 298 ntBASIC2.77□□□□□ -1.97
LINC01555Q8NAE3 AC026634.1-201ENST00000634369 198 ntBASIC2.77□□□□□ -1.97
LINC01555Q8NAE3 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC2.77□□□□□ -1.97
LINC01555Q8NAE3 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC2.77□□□□□ -1.97
LINC01555Q8NAE3 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC2.77□□□□□ -1.97
LINC01555Q8NAE3 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC2.77□□□□□ -1.97
LINC01555Q8NAE3 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC2.76□□□□□ -1.97
LINC01555Q8NAE3 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
LINC01555Q8NAE3 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC2.76□□□□□ -1.97
LINC01555Q8NAE3 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC2.76□□□□□ -1.97
LINC01555Q8NAE3 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC2.76□□□□□ -1.97
LINC01555Q8NAE3 MAPK6PS3-201ENST00000403865 2162 ntBASIC2.76□□□□□ -1.97
LINC01555Q8NAE3 MTND5P28-201ENST00000438005 1594 ntBASIC2.76□□□□□ -1.97
LINC01555Q8NAE3 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC2.76□□□□□ -1.97
LINC01555Q8NAE3 RNU1-35P-201ENST00000362782 153 ntBASIC2.76□□□□□ -1.97
LINC01555Q8NAE3 RNU6-374P-201ENST00000364146 108 ntBASIC2.76□□□□□ -1.97
LINC01555Q8NAE3 RNU6-157P-201ENST00000383957 107 ntBASIC2.76□□□□□ -1.97
LINC01555Q8NAE3 AC016769.3-201ENST00000396562 315 ntBASIC2.76□□□□□ -1.97
LINC01555Q8NAE3 EIF5P1-201ENST00000400019 1231 ntBASIC2.76□□□□□ -1.97
LINC01555Q8NAE3 SSXP10-201ENST00000402595 565 ntBASIC2.76□□□□□ -1.97
LINC01555Q8NAE3 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC2.76□□□□□ -1.97
LINC01555Q8NAE3 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC2.76□□□□□ -1.97
LINC01555Q8NAE3 RPS3AP9-201ENST00000417027 792 ntBASIC2.76□□□□□ -1.97
LINC01555Q8NAE3 AC012498.1-201ENST00000424037 437 ntBASIC2.76□□□□□ -1.97
LINC01555Q8NAE3 AC091390.3-201ENST00000426478 338 ntBASIC2.76□□□□□ -1.97
LINC01555Q8NAE3 AC096632.1-201ENST00000427395 310 ntBASIC2.76□□□□□ -1.97
LINC01555Q8NAE3 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC2.76□□□□□ -1.97
LINC01555Q8NAE3 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC2.76□□□□□ -1.97
LINC01555Q8NAE3 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
LINC01555Q8NAE3 AC241584.1-201ENST00000438469 1241 ntBASIC2.76□□□□□ -1.97
LINC01555Q8NAE3 AC107083.1-201ENST00000439643 279 ntBASIC2.76□□□□□ -1.97
LINC01555Q8NAE3 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC2.76□□□□□ -1.97
LINC01555Q8NAE3 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC2.76□□□□□ -1.97
LINC01555Q8NAE3 VN1R10P-201ENST00000447106 875 ntBASIC2.76□□□□□ -1.97
LINC01555Q8NAE3 MTCO1P48-201ENST00000448024 1096 ntBASIC2.76□□□□□ -1.97
LINC01555Q8NAE3 AC104073.1-201ENST00000451988 151 ntBASIC2.76□□□□□ -1.97
LINC01555Q8NAE3 CEACAMP4-201ENST00000457676 421 ntBASIC2.76□□□□□ -1.97
LINC01555Q8NAE3 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC2.76□□□□□ -1.97
LINC01555Q8NAE3 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
LINC01555Q8NAE3 AC010301.1-201ENST00000473936 355 ntBASIC2.76□□□□□ -1.97
LINC01555Q8NAE3 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC2.76□□□□□ -1.97
LINC01555Q8NAE3 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC2.76□□□□□ -1.97
LINC01555Q8NAE3 HSPE1P23-201ENST00000509838 286 ntBASIC2.76□□□□□ -1.97
LINC01555Q8NAE3 AC079395.1-201ENST00000510981 262 ntBASIC2.76□□□□□ -1.97
LINC01555Q8NAE3 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC2.76□□□□□ -1.97
LINC01555Q8NAE3 RNA5SP380-201ENST00000517190 98 ntBASIC2.76□□□□□ -1.97
LINC01555Q8NAE3 IGKV2D-36-201ENST00000518643 226 ntBASIC2.76□□□□□ -1.97
LINC01555Q8NAE3 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC2.76□□□□□ -1.97
LINC01555Q8NAE3 AC027309.2-201ENST00000520566 192 ntBASIC2.76□□□□□ -1.97
LINC01555Q8NAE3 FAM60DP-201ENST00000524174 632 ntBASIC2.76□□□□□ -1.97
LINC01555Q8NAE3 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC2.76□□□□□ -1.97
LINC01555Q8NAE3 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC2.76□□□□□ -1.97
LINC01555Q8NAE3 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC2.76□□□□□ -1.97
LINC01555Q8NAE3 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC2.76□□□□□ -1.97
LINC01555Q8NAE3 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC2.76□□□□□ -1.97
LINC01555Q8NAE3 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC2.76□□□□□ -1.97
LINC01555Q8NAE3 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC2.76□□□□□ -1.97
LINC01555Q8NAE3 AC008751.2-201ENST00000597885 980 ntBASIC2.76□□□□□ -1.97
LINC01555Q8NAE3 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC2.76□□□□□ -1.97
LINC01555Q8NAE3 AC024153.1-201ENST00000603103 365 ntBASIC2.76□□□□□ -1.97
LINC01555Q8NAE3 AL031281.1-201ENST00000604049 488 ntBASIC2.76□□□□□ -1.97
LINC01555Q8NAE3 HMGN2P28-201ENST00000606102 262 ntBASIC2.76□□□□□ -1.97
LINC01555Q8NAE3 AC092650.2-201ENST00000619984 902 ntBASIC2.76□□□□□ -1.97
LINC01555Q8NAE3 AP000676.3-201ENST00000623299 569 ntBASIC2.76□□□□□ -1.97
LINC01555Q8NAE3 AC048347.1-201ENST00000624621 427 ntBASIC2.76□□□□□ -1.97
LINC01555Q8NAE3 AC019226.2-201ENST00000625973 424 ntBASIC2.76□□□□□ -1.97
LINC01555Q8NAE3 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
LINC01555Q8NAE3 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
LINC01555Q8NAE3 GABRG2-229ENST00000641017 3628 ntBASIC2.75□□□□□ -1.97
LINC01555Q8NAE3 NF1-214ENST00000490416 1329 ntTSL 3 BASIC2.75□□□□□ -1.97
LINC01555Q8NAE3 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
LINC01555Q8NAE3 SNRPEP3-201ENST00000338402 276 ntBASIC2.75□□□□□ -1.97
LINC01555Q8NAE3 SNORD113-6-201ENST00000363345 75 ntBASIC2.75□□□□□ -1.97
LINC01555Q8NAE3 SNORD6-201ENST00000365444 73 ntBASIC2.75□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 89.4 ms