Protein–RNA interactions for Protein: Q6ZNE9

RUFY4, RUN and FYVE domain-containing protein 4, humanhuman

Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RUFY4Q6ZNE9 MIR659-201ENST00000384963 97 ntBASIC5.18□□□□□ -1.58
RUFY4Q6ZNE9 AL590762.2-201ENST00000395798 571 ntBASIC5.18□□□□□ -1.58
RUFY4Q6ZNE9 AL356057.2-201ENST00000403318 432 ntBASIC5.18□□□□□ -1.58
RUFY4Q6ZNE9 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC5.18□□□□□ -1.58
RUFY4Q6ZNE9 RN7SKP267-201ENST00000410381 285 ntBASIC5.18□□□□□ -1.58
RUFY4Q6ZNE9 RNU4-25P-201ENST00000410569 230 ntBASIC5.18□□□□□ -1.58
RUFY4Q6ZNE9 RNU6-516P-201ENST00000411381 104 ntBASIC5.18□□□□□ -1.58
RUFY4Q6ZNE9 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC5.18□□□□□ -1.58
RUFY4Q6ZNE9 H2AFZP5-201ENST00000446960 382 ntBASIC5.18□□□□□ -1.58
RUFY4Q6ZNE9 RPL23AP11-201ENST00000475260 469 ntBASIC5.18□□□□□ -1.58
RUFY4Q6ZNE9 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC5.18□□□□□ -1.58
RUFY4Q6ZNE9 AC083829.1-201ENST00000503756 657 ntBASIC5.18□□□□□ -1.58
RUFY4Q6ZNE9 AC116562.3-201ENST00000506136 177 ntBASIC5.18□□□□□ -1.58
RUFY4Q6ZNE9 MTCO3P9-201ENST00000506989 781 ntBASIC5.18□□□□□ -1.58
RUFY4Q6ZNE9 RNU4-29P-201ENST00000515943 174 ntBASIC5.18□□□□□ -1.58
RUFY4Q6ZNE9 RNU6-798P-201ENST00000516912 103 ntBASIC5.18□□□□□ -1.58
RUFY4Q6ZNE9 AC068587.5-201ENST00000528506 175 ntBASIC5.18□□□□□ -1.58
RUFY4Q6ZNE9 PTP4A1P6-201ENST00000531034 478 ntBASIC5.18□□□□□ -1.58
RUFY4Q6ZNE9 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC5.18□□□□□ -1.58
RUFY4Q6ZNE9 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC5.18□□□□□ -1.58
RUFY4Q6ZNE9 FKBP1BP1-201ENST00000553366 325 ntBASIC5.18□□□□□ -1.58
RUFY4Q6ZNE9 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC5.18□□□□□ -1.58
RUFY4Q6ZNE9 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC5.18□□□□□ -1.58
RUFY4Q6ZNE9 AL008729.2-201ENST00000606393 473 ntBASIC5.18□□□□□ -1.58
RUFY4Q6ZNE9 AC093913.1-201ENST00000614178 329 ntBASIC5.18□□□□□ -1.58
RUFY4Q6ZNE9 AP001486.3-201ENST00000615334 372 ntBASIC5.18□□□□□ -1.58
RUFY4Q6ZNE9 AC009248.2-201ENST00000619826 254 ntBASIC5.18□□□□□ -1.58
RUFY4Q6ZNE9 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
RUFY4Q6ZNE9 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC5.18□□□□□ -1.58
RUFY4Q6ZNE9 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC5.18□□□□□ -1.58
RUFY4Q6ZNE9 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC5.18□□□□□ -1.58
RUFY4Q6ZNE9 CARF-203ENST00000414439 2099 ntTSL 2 BASIC5.17□□□□□ -1.58
RUFY4Q6ZNE9 ATP8A2P2-201ENST00000437678 1568 ntBASIC5.17□□□□□ -1.58
RUFY4Q6ZNE9 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
RUFY4Q6ZNE9 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
RUFY4Q6ZNE9 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC5.17□□□□□ -1.58
RUFY4Q6ZNE9 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
RUFY4Q6ZNE9 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
RUFY4Q6ZNE9 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC5.17□□□□□ -1.58
RUFY4Q6ZNE9 RNU4-79P-201ENST00000362764 141 ntBASIC5.17□□□□□ -1.58
RUFY4Q6ZNE9 Y_RNA.231-201ENST00000364358 102 ntBASIC5.17□□□□□ -1.58
RUFY4Q6ZNE9 CD3D-202ENST00000392884 476 ntTSL 2 BASIC5.17□□□□□ -1.58
RUFY4Q6ZNE9 FAT1P1-201ENST00000406588 507 ntBASIC5.17□□□□□ -1.58
RUFY4Q6ZNE9 RNA5SP56-201ENST00000410277 118 ntBASIC5.17□□□□□ -1.58
RUFY4Q6ZNE9 RNU2-29P-201ENST00000410423 189 ntBASIC5.17□□□□□ -1.58
RUFY4Q6ZNE9 RN7SKP140-201ENST00000411196 284 ntBASIC5.17□□□□□ -1.58
RUFY4Q6ZNE9 OR1AA1P-201ENST00000419597 916 ntBASIC5.17□□□□□ -1.58
RUFY4Q6ZNE9 EIF4HP2-201ENST00000424380 563 ntBASIC5.17□□□□□ -1.58
RUFY4Q6ZNE9 RSL24D1P6-201ENST00000426934 401 ntBASIC5.17□□□□□ -1.58
RUFY4Q6ZNE9 RPS27AP12-201ENST00000429552 465 ntBASIC5.17□□□□□ -1.58
RUFY4Q6ZNE9 MTATP6P16-201ENST00000434543 526 ntBASIC5.17□□□□□ -1.58
RUFY4Q6ZNE9 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC5.17□□□□□ -1.58
RUFY4Q6ZNE9 PPIAP3-201ENST00000450588 505 ntBASIC5.17□□□□□ -1.58
RUFY4Q6ZNE9 AC005008.1-201ENST00000456151 612 ntBASIC5.17□□□□□ -1.58
RUFY4Q6ZNE9 HMGN2P26-201ENST00000463169 339 ntBASIC5.17□□□□□ -1.58
RUFY4Q6ZNE9 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC5.17□□□□□ -1.58
RUFY4Q6ZNE9 AC093840.1-201ENST00000511599 336 ntBASIC5.17□□□□□ -1.58
RUFY4Q6ZNE9 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC5.17□□□□□ -1.58
RUFY4Q6ZNE9 Y_RNA.701-201ENST00000516812 110 ntBASIC5.17□□□□□ -1.58
RUFY4Q6ZNE9 RN7SKP116-201ENST00000516902 319 ntBASIC5.17□□□□□ -1.58
RUFY4Q6ZNE9 RN7SKP234-201ENST00000517173 224 ntBASIC5.17□□□□□ -1.58
RUFY4Q6ZNE9 AC105029.1-201ENST00000520250 669 ntBASIC5.17□□□□□ -1.58
RUFY4Q6ZNE9 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC5.17□□□□□ -1.58
RUFY4Q6ZNE9 AL133271.1-201ENST00000538229 291 ntBASIC5.17□□□□□ -1.58
RUFY4Q6ZNE9 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
RUFY4Q6ZNE9 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC5.17□□□□□ -1.58
RUFY4Q6ZNE9 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC5.17□□□□□ -1.58
RUFY4Q6ZNE9 ANP32BP3-201ENST00000559213 706 ntBASIC5.17□□□□□ -1.58
RUFY4Q6ZNE9 BNIP3P5-201ENST00000562290 498 ntBASIC5.17□□□□□ -1.58
RUFY4Q6ZNE9 MIR4775-201ENST00000581168 75 ntBASIC5.17□□□□□ -1.58
RUFY4Q6ZNE9 AC069061.3-201ENST00000582254 823 ntBASIC5.17□□□□□ -1.58
RUFY4Q6ZNE9 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC5.17□□□□□ -1.58
RUFY4Q6ZNE9 AC078795.3-201ENST00000602913 472 ntBASIC5.17□□□□□ -1.58
RUFY4Q6ZNE9 AL121992.2-201ENST00000606262 256 ntBASIC5.17□□□□□ -1.58
RUFY4Q6ZNE9 AL442067.2-201ENST00000614033 363 ntBASIC5.17□□□□□ -1.58
RUFY4Q6ZNE9 U3.53-201ENST00000628922 216 ntBASIC5.17□□□□□ -1.58
RUFY4Q6ZNE9 MIR6830-201ENST00000636015 70 ntBASIC5.17□□□□□ -1.58
RUFY4Q6ZNE9 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
RUFY4Q6ZNE9 RAD17P1-201ENST00000418130 2042 ntBASIC5.17□□□□□ -1.58
RUFY4Q6ZNE9 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC5.17□□□□□ -1.58
RUFY4Q6ZNE9 OR14L1P-202ENST00000641545 3009 ntBASIC5.17□□□□□ -1.58
RUFY4Q6ZNE9 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
RUFY4Q6ZNE9 MTCO1P9-201ENST00000505577 1534 ntBASIC5.17□□□□□ -1.58
RUFY4Q6ZNE9 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
RUFY4Q6ZNE9 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
RUFY4Q6ZNE9 AC006971.1-201ENST00000407916 4486 ntBASIC5.17□□□□□ -1.58
RUFY4Q6ZNE9 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC5.17□□□□□ -1.58
RUFY4Q6ZNE9 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC5.16□□□□□ -1.58
RUFY4Q6ZNE9 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC5.16□□□□□ -1.58
RUFY4Q6ZNE9 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC5.16□□□□□ -1.58
RUFY4Q6ZNE9 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
RUFY4Q6ZNE9 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC5.16□□□□□ -1.58
RUFY4Q6ZNE9 MAPK10-286ENST00000641208 8747 ntBASIC5.16□□□□□ -1.58
RUFY4Q6ZNE9 DLD-204ENST00000437604 1859 ntTSL 2 BASIC5.16□□□□□ -1.58
RUFY4Q6ZNE9 AC021146.4-201ENST00000309229 279 ntBASIC5.16□□□□□ -1.58
RUFY4Q6ZNE9 RNU6-432P-201ENST00000384196 109 ntBASIC5.16□□□□□ -1.58
RUFY4Q6ZNE9 MIR514A2-201ENST00000385131 88 ntBASIC5.16□□□□□ -1.58
RUFY4Q6ZNE9 MIR514A3-201ENST00000385132 88 ntBASIC5.16□□□□□ -1.58
RUFY4Q6ZNE9 RNU6ATAC5P-201ENST00000388104 126 ntBASIC5.16□□□□□ -1.58
RUFY4Q6ZNE9 MTND3P8-201ENST00000412909 339 ntBASIC5.16□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 232.1 ms