Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC3.47□□□□□ -1.85
CDH13P55290 AP1S2P1-201ENST00000457344 379 ntBASIC3.47□□□□□ -1.85
CDH13P55290 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC3.47□□□□□ -1.85
CDH13P55290 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
CDH13P55290 AC026402.1-201ENST00000513642 170 ntBASIC3.47□□□□□ -1.85
CDH13P55290 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC3.47□□□□□ -1.85
CDH13P55290 RNU2-27P-201ENST00000516185 142 ntBASIC3.47□□□□□ -1.85
CDH13P55290 MTND2P38-201ENST00000522536 667 ntBASIC3.47□□□□□ -1.85
CDH13P55290 EMP1-206ENST00000537612 505 ntTSL 3 BASIC3.47□□□□□ -1.85
CDH13P55290 AC026333.2-201ENST00000542164 106 ntBASIC3.47□□□□□ -1.85
CDH13P55290 MED28P6-201ENST00000558776 231 ntBASIC3.47□□□□□ -1.85
CDH13P55290 HSPE1P5-201ENST00000561489 272 ntBASIC3.47□□□□□ -1.85
CDH13P55290 MIR5685-201ENST00000579080 79 ntBASIC3.47□□□□□ -1.85
CDH13P55290 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC3.47□□□□□ -1.85
CDH13P55290 BDH2P1-201ENST00000602288 736 ntBASIC3.47□□□□□ -1.85
CDH13P55290 AP001330.4-201ENST00000604350 154 ntBASIC3.47□□□□□ -1.85
CDH13P55290 MIR6798-201ENST00000612887 67 ntBASIC3.47□□□□□ -1.85
CDH13P55290 AL357559.1-201ENST00000622228 274 ntBASIC3.47□□□□□ -1.85
CDH13P55290 AC091965.5-201ENST00000624785 342 ntBASIC3.47□□□□□ -1.85
CDH13P55290 AC097655.1-201ENST00000635075 318 ntBASIC3.47□□□□□ -1.85
CDH13P55290 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC3.47□□□□□ -1.85
CDH13P55290 MIR4275-201ENST00000636486 87 ntBASIC3.47□□□□□ -1.85
CDH13P55290 AC244258.1-201ENST00000637553 1071 ntBASIC3.47□□□□□ -1.85
CDH13P55290 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.47□□□□□ -1.85
CDH13P55290 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
CDH13P55290 AC011460.1-201ENST00000636268 1834 ntBASIC3.47□□□□□ -1.85
CDH13P55290 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.85
CDH13P55290 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.85
CDH13P55290 CR383658.2-201ENST00000547576 1525 ntBASIC3.46□□□□□ -1.86
CDH13P55290 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.46□□□□□ -1.86
CDH13P55290 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
CDH13P55290 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
CDH13P55290 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
CDH13P55290 RNU6-114P-201ENST00000384704 105 ntBASIC3.46□□□□□ -1.86
CDH13P55290 AL031577.2-201ENST00000404133 280 ntBASIC3.46□□□□□ -1.86
CDH13P55290 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC3.46□□□□□ -1.86
CDH13P55290 AC068533.1-201ENST00000418542 415 ntBASIC3.46□□□□□ -1.86
CDH13P55290 USP9YP26-201ENST00000421008 661 ntBASIC3.46□□□□□ -1.86
CDH13P55290 TRAPPC2P4-201ENST00000421750 331 ntBASIC3.46□□□□□ -1.86
CDH13P55290 RPS27AP14-201ENST00000422868 454 ntBASIC3.46□□□□□ -1.86
CDH13P55290 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC3.46□□□□□ -1.86
CDH13P55290 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC3.46□□□□□ -1.86
CDH13P55290 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC3.46□□□□□ -1.86
CDH13P55290 HMGB3P8-201ENST00000449709 577 ntBASIC3.46□□□□□ -1.86
CDH13P55290 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.46□□□□□ -1.86
CDH13P55290 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC3.46□□□□□ -1.86
CDH13P55290 RPL23AP62-201ENST00000463396 453 ntBASIC3.46□□□□□ -1.86
CDH13P55290 SNRPGP3-201ENST00000469405 227 ntBASIC3.46□□□□□ -1.86
CDH13P55290 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC3.46□□□□□ -1.86
CDH13P55290 VN1R104P-201ENST00000505115 1009 ntBASIC3.46□□□□□ -1.86
CDH13P55290 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC3.46□□□□□ -1.86
CDH13P55290 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC3.46□□□□□ -1.86
CDH13P55290 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC3.46□□□□□ -1.86
CDH13P55290 AC007834.2-201ENST00000536310 343 ntBASIC3.46□□□□□ -1.86
CDH13P55290 ARL6IP1P1-201ENST00000545836 610 ntBASIC3.46□□□□□ -1.86
CDH13P55290 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC3.46□□□□□ -1.86
CDH13P55290 TGIF1P1-201ENST00000558095 802 ntBASIC3.46□□□□□ -1.86
CDH13P55290 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC3.46□□□□□ -1.86
CDH13P55290 MIR4307-201ENST00000582802 84 ntBASIC3.46□□□□□ -1.86
CDH13P55290 AP001029.3-201ENST00000588063 596 ntBASIC3.46□□□□□ -1.86
CDH13P55290 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
CDH13P55290 CLIC4P2-201ENST00000601934 717 ntBASIC3.46□□□□□ -1.86
CDH13P55290 AP000403.1-201ENST00000603349 851 ntBASIC3.46□□□□□ -1.86
CDH13P55290 AC067959.1-201ENST00000604334 379 ntBASIC3.46□□□□□ -1.86
CDH13P55290 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC3.46□□□□□ -1.86
CDH13P55290 AC103710.4-201ENST00000609301 899 ntBASIC3.46□□□□□ -1.86
CDH13P55290 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC3.46□□□□□ -1.86
CDH13P55290 AL731566.2-201ENST00000618971 317 ntBASIC3.46□□□□□ -1.86
CDH13P55290 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.46□□□□□ -1.86
CDH13P55290 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
CDH13P55290 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.46□□□□□ -1.86
CDH13P55290 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
CDH13P55290 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
CDH13P55290 AC002546.1-201ENST00000588041 2504 ntBASIC3.46□□□□□ -1.86
CDH13P55290 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
CDH13P55290 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.46□□□□□ -1.86
CDH13P55290 AC007823.1-201ENST00000569932 1566 ntBASIC3.46□□□□□ -1.86
CDH13P55290 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC3.46□□□□□ -1.86
CDH13P55290 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC3.45□□□□□ -1.86
CDH13P55290 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
CDH13P55290 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.45□□□□□ -1.86
CDH13P55290 MIR30E-201ENST00000362104 92 ntBASIC3.45□□□□□ -1.86
CDH13P55290 RNU6-501P-201ENST00000364072 100 ntBASIC3.45□□□□□ -1.86
CDH13P55290 RNA5SP51-201ENST00000364750 119 ntBASIC3.45□□□□□ -1.86
CDH13P55290 ESD-201ENST00000378697 1079 ntTSL 5 BASIC3.45□□□□□ -1.86
CDH13P55290 NFIB-202ENST00000380924 840 ntTSL 5 BASIC3.45□□□□□ -1.86
CDH13P55290 SNORD116-8-201ENST00000384365 95 ntBASIC3.45□□□□□ -1.86
CDH13P55290 U8.11-201ENST00000384699 133 ntBASIC3.45□□□□□ -1.86
CDH13P55290 U8.12-201ENST00000384701 133 ntBASIC3.45□□□□□ -1.86
CDH13P55290 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
CDH13P55290 AC025750.1-201ENST00000399891 379 ntBASIC3.45□□□□□ -1.86
CDH13P55290 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.45□□□□□ -1.86
CDH13P55290 RPS3AP24-201ENST00000407896 734 ntBASIC3.45□□□□□ -1.86
CDH13P55290 AL359704.1-201ENST00000411586 781 ntBASIC3.45□□□□□ -1.86
CDH13P55290 AC017079.2-201ENST00000416102 485 ntBASIC3.45□□□□□ -1.86
CDH13P55290 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC3.45□□□□□ -1.86
CDH13P55290 DBIP2-201ENST00000419076 262 ntBASIC3.45□□□□□ -1.86
CDH13P55290 RPL21P32-201ENST00000419877 477 ntBASIC3.45□□□□□ -1.86
CDH13P55290 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC3.45□□□□□ -1.86
CDH13P55290 RPL31P12-201ENST00000422587 358 ntBASIC3.45□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 99 ms