Protein–RNA interactions for Protein: P54277

PMS1, PMS1 protein homolog 1, humanhuman

Known RBP Predictions only

Length 932 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1P54277 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC5.06□□□□□ -1.6
PMS1P54277 AL022345.1-201ENST00000607292 135 ntBASIC5.06□□□□□ -1.6
PMS1P54277 AC091979.2-201ENST00000607514 214 ntBASIC5.06□□□□□ -1.6
PMS1P54277 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC5.06□□□□□ -1.6
PMS1P54277 AP001273.1-201ENST00000624493 3152 ntBASIC5.06□□□□□ -1.6
PMS1P54277 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
PMS1P54277 ZNF736P3Y-201ENST00000428264 1465 ntBASIC5.06□□□□□ -1.6
PMS1P54277 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
PMS1P54277 MFF-206ENST00000392059 1710 ntTSL 5 BASIC5.06□□□□□ -1.6
PMS1P54277 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
PMS1P54277 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC5.05□□□□□ -1.6
PMS1P54277 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
PMS1P54277 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
PMS1P54277 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
PMS1P54277 AC021146.4-201ENST00000309229 279 ntBASIC5.05□□□□□ -1.6
PMS1P54277 AL139276.1-201ENST00000311910 1001 ntBASIC5.05□□□□□ -1.6
PMS1P54277 Y_RNA.387-201ENST00000383918 102 ntBASIC5.05□□□□□ -1.6
PMS1P54277 MIR1250-201ENST00000408098 113 ntBASIC5.05□□□□□ -1.6
PMS1P54277 BX510359.2-201ENST00000417920 305 ntBASIC5.05□□□□□ -1.6
PMS1P54277 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC5.05□□□□□ -1.6
PMS1P54277 TRAPPC2P3-201ENST00000443200 321 ntBASIC5.05□□□□□ -1.6
PMS1P54277 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC5.05□□□□□ -1.6
PMS1P54277 snoU109.4-201ENST00000458953 143 ntBASIC5.05□□□□□ -1.6
PMS1P54277 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC5.05□□□□□ -1.6
PMS1P54277 AC135721.1-201ENST00000497954 479 ntBASIC5.05□□□□□ -1.6
PMS1P54277 AC008638.1-201ENST00000506035 866 ntBASIC5.05□□□□□ -1.6
PMS1P54277 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC5.05□□□□□ -1.6
PMS1P54277 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC5.05□□□□□ -1.6
PMS1P54277 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC5.05□□□□□ -1.6
PMS1P54277 ARL6IP1P1-201ENST00000545836 610 ntBASIC5.05□□□□□ -1.6
PMS1P54277 AC084200.1-201ENST00000547370 547 ntTSL 4 BASIC5.05□□□□□ -1.6
PMS1P54277 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC5.05□□□□□ -1.6
PMS1P54277 ATP5J2P6-201ENST00000565203 266 ntBASIC5.05□□□□□ -1.6
PMS1P54277 MIR4703-201ENST00000577728 79 ntBASIC5.05□□□□□ -1.6
PMS1P54277 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC5.05□□□□□ -1.6
PMS1P54277 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC5.05□□□□□ -1.6
PMS1P54277 AL008729.2-201ENST00000606393 473 ntBASIC5.05□□□□□ -1.6
PMS1P54277 AC103710.3-201ENST00000608157 948 ntBASIC5.05□□□□□ -1.6
PMS1P54277 uc_338.11-201ENST00000619132 160 ntBASIC5.05□□□□□ -1.6
PMS1P54277 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC5.05□□□□□ -1.6
PMS1P54277 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
PMS1P54277 OSBPL9P4-201ENST00000371707 1800 ntBASIC5.04□□□□□ -1.6
PMS1P54277 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
PMS1P54277 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
PMS1P54277 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
PMS1P54277 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC5.04□□□□□ -1.6
PMS1P54277 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
PMS1P54277 SUPT16HP1-201ENST00000537175 3133 ntBASIC5.04□□□□□ -1.6
PMS1P54277 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC5.04□□□□□ -1.6
PMS1P54277 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
PMS1P54277 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
PMS1P54277 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
PMS1P54277 PABPC1P7-201ENST00000413177 1513 ntBASIC5.04□□□□□ -1.6
PMS1P54277 MAPK10-349ENST00000641767 3661 ntBASIC5.04□□□□□ -1.6
PMS1P54277 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
PMS1P54277 RNU6-637P-201ENST00000384050 107 ntBASIC5.04□□□□□ -1.6
PMS1P54277 Y_RNA.493-201ENST00000384422 102 ntBASIC5.04□□□□□ -1.6
PMS1P54277 MIR659-201ENST00000384963 97 ntBASIC5.04□□□□□ -1.6
PMS1P54277 RN7SKP159-201ENST00000410657 292 ntBASIC5.04□□□□□ -1.6
PMS1P54277 ARL5AP1-201ENST00000418991 388 ntBASIC5.04□□□□□ -1.6
PMS1P54277 AC018630.2-202ENST00000422992 927 ntBASIC5.04□□□□□ -1.6
PMS1P54277 AL353729.1-201ENST00000425044 720 ntBASIC5.04□□□□□ -1.6
PMS1P54277 AC005094.1-201ENST00000440420 368 ntBASIC5.04□□□□□ -1.6
PMS1P54277 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC5.04□□□□□ -1.6
PMS1P54277 RPL23AP43-201ENST00000446445 471 ntBASIC5.04□□□□□ -1.6
PMS1P54277 AC005008.1-201ENST00000456151 612 ntBASIC5.04□□□□□ -1.6
PMS1P54277 SNRPFP3-201ENST00000457792 225 ntBASIC5.04□□□□□ -1.6
PMS1P54277 AC079804.1-201ENST00000461922 436 ntBASIC5.04□□□□□ -1.6
PMS1P54277 RN7SL329P-201ENST00000467740 299 ntBASIC5.04□□□□□ -1.6
PMS1P54277 RPS15AP36-201ENST00000492022 382 ntBASIC5.04□□□□□ -1.6
PMS1P54277 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC5.04□□□□□ -1.6
PMS1P54277 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC5.04□□□□□ -1.6
PMS1P54277 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC5.04□□□□□ -1.6
PMS1P54277 HIGD1AP3-201ENST00000515857 278 ntBASIC5.04□□□□□ -1.6
PMS1P54277 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC5.04□□□□□ -1.6
PMS1P54277 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC5.04□□□□□ -1.6
PMS1P54277 DEFB109D-201ENST00000529497 240 ntBASIC5.04□□□□□ -1.6
PMS1P54277 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC5.04□□□□□ -1.6
PMS1P54277 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC5.04□□□□□ -1.6
PMS1P54277 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC5.04□□□□□ -1.6
PMS1P54277 BNIP3P22-201ENST00000593399 556 ntBASIC5.04□□□□□ -1.6
PMS1P54277 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC5.04□□□□□ -1.6
PMS1P54277 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC5.04□□□□□ -1.6
PMS1P54277 RPL7P50-201ENST00000600588 727 ntBASIC5.04□□□□□ -1.6
PMS1P54277 AL031176.1-201ENST00000604554 466 ntBASIC5.04□□□□□ -1.6
PMS1P54277 AL133215.3-201ENST00000609801 448 ntBASIC5.04□□□□□ -1.6
PMS1P54277 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC5.04□□□□□ -1.6
PMS1P54277 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC5.04□□□□□ -1.6
PMS1P54277 AC027287.1-201ENST00000553115 1453 ntBASIC5.04□□□□□ -1.6
PMS1P54277 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
PMS1P54277 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC5.04□□□□□ -1.6
PMS1P54277 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
PMS1P54277 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC5.03□□□□□ -1.6
PMS1P54277 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
PMS1P54277 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC5.03□□□□□ -1.6
PMS1P54277 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
PMS1P54277 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC5.03□□□□□ -1.6
PMS1P54277 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
PMS1P54277 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
PMS1P54277 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 85.1 ms