Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 AC090970.1-201ENST00000561207 381 ntTSL 5 BASIC2.35□□□□□ -2.03
NUP98P52948 MIR5089-201ENST00000580047 84 ntBASIC2.35□□□□□ -2.03
NUP98P52948 AC084768.2-201ENST00000622736 221 ntBASIC2.35□□□□□ -2.03
NUP98P52948 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
NUP98P52948 NSRP1P1-201ENST00000444067 1693 ntBASIC2.35□□□□□ -2.03
NUP98P52948 ZNF271P-202ENST00000465539 1970 ntBASIC2.35□□□□□ -2.03
NUP98P52948 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
NUP98P52948 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
NUP98P52948 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC2.35□□□□□ -2.03
NUP98P52948 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC2.35□□□□□ -2.03
NUP98P52948 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC2.35□□□□□ -2.03
NUP98P52948 OR4K7P-201ENST00000580232 945 ntBASIC2.35□□□□□ -2.03
NUP98P52948 TP73-AS1.1-201ENST00000611447 161 ntBASIC2.35□□□□□ -2.03
NUP98P52948 AC002064.3-201ENST00000623448 346 ntBASIC2.35□□□□□ -2.03
NUP98P52948 SNORA50A-202ENST00000629536 136 ntBASIC2.35□□□□□ -2.03
NUP98P52948 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC2.35□□□□□ -2.03
NUP98P52948 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC2.35□□□□□ -2.03
NUP98P52948 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.34□□□□□ -2.03
NUP98P52948 SNORA51.2-201ENST00000364595 132 ntBASIC2.34□□□□□ -2.03
NUP98P52948 TRIAP1P1-201ENST00000427062 225 ntBASIC2.34□□□□□ -2.03
NUP98P52948 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC2.34□□□□□ -2.03
NUP98P52948 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC2.34□□□□□ -2.03
NUP98P52948 AC090543.1-201ENST00000492168 485 ntBASIC2.34□□□□□ -2.03
NUP98P52948 PDCD10-216ENST00000492396 814 ntTSL 5 BASIC2.34□□□□□ -2.03
NUP98P52948 Y_RNA.673-201ENST00000516306 88 ntBASIC2.34□□□□□ -2.03
NUP98P52948 Y_RNA.676-201ENST00000516393 96 ntBASIC2.34□□□□□ -2.03
NUP98P52948 RNU6-1308P-201ENST00000516817 103 ntBASIC2.34□□□□□ -2.03
NUP98P52948 AC115085.1-201ENST00000588924 229 ntBASIC2.34□□□□□ -2.03
NUP98P52948 AC128687.1-201ENST00000605304 619 ntBASIC2.34□□□□□ -2.03
NUP98P52948 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC2.34□□□□□ -2.03
NUP98P52948 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.34□□□□□ -2.03
NUP98P52948 AL353746.1-201ENST00000566293 6881 ntBASIC2.34□□□□□ -2.03
NUP98P52948 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC2.34□□□□□ -2.04
NUP98P52948 AP001350.1-201ENST00000601906 1524 ntBASIC2.34□□□□□ -2.04
NUP98P52948 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.34□□□□□ -2.04
NUP98P52948 CD3D-202ENST00000392884 476 ntTSL 2 BASIC2.33□□□□□ -2.04
NUP98P52948 AL627390.1-201ENST00000396055 340 ntBASIC2.33□□□□□ -2.04
NUP98P52948 EIF1AXP1-201ENST00000419267 435 ntBASIC2.33□□□□□ -2.04
NUP98P52948 HIGD1AP11-201ENST00000438361 280 ntBASIC2.33□□□□□ -2.04
NUP98P52948 MTCO3P17-201ENST00000443775 513 ntBASIC2.33□□□□□ -2.04
NUP98P52948 AC023512.1-201ENST00000444513 499 ntBASIC2.33□□□□□ -2.04
NUP98P52948 AL035407.2-201ENST00000454090 378 ntBASIC2.33□□□□□ -2.04
NUP98P52948 RNU1-61P-201ENST00000516107 151 ntBASIC2.33□□□□□ -2.04
NUP98P52948 AC109635.4-202ENST00000531666 412 ntBASIC2.33□□□□□ -2.04
NUP98P52948 SYF2P1-201ENST00000550658 413 ntBASIC2.33□□□□□ -2.04
NUP98P52948 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC2.33□□□□□ -2.04
NUP98P52948 AC245128.3-201ENST00000594721 748 ntBASIC2.33□□□□□ -2.04
NUP98P52948 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC2.33□□□□□ -2.04
NUP98P52948 VIS1.1-201ENST00000610517 203 ntBASIC2.33□□□□□ -2.04
NUP98P52948 AC103988.1-201ENST00000566382 2177 ntBASIC2.33□□□□□ -2.04
NUP98P52948 SNORA26.7-201ENST00000391288 122 ntBASIC2.33□□□□□ -2.04
NUP98P52948 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
NUP98P52948 MIR1294-201ENST00000408503 142 ntBASIC2.33□□□□□ -2.04
NUP98P52948 AC234782.4-201ENST00000417646 1048 ntBASIC2.33□□□□□ -2.04
NUP98P52948 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC2.33□□□□□ -2.04
NUP98P52948 Z77249.1-201ENST00000444622 1175 ntBASIC2.33□□□□□ -2.04
NUP98P52948 AC104308.1-201ENST00000454621 333 ntBASIC2.33□□□□□ -2.04
NUP98P52948 RPL23AP63-201ENST00000498752 471 ntBASIC2.33□□□□□ -2.04
NUP98P52948 AC090071.1-201ENST00000507713 644 ntBASIC2.33□□□□□ -2.04
NUP98P52948 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC2.33□□□□□ -2.04
NUP98P52948 MTND4LP22-201ENST00000508209 276 ntBASIC2.33□□□□□ -2.04
NUP98P52948 HMGB1P1-201ENST00000522557 636 ntBASIC2.33□□□□□ -2.04
NUP98P52948 AC011611.5-201ENST00000552477 578 ntBASIC2.33□□□□□ -2.04
NUP98P52948 AP004372.1-201ENST00000604842 844 ntBASIC2.33□□□□□ -2.04
NUP98P52948 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.33□□□□□ -2.04
NUP98P52948 AC005336.3-201ENST00000623833 2679 ntBASIC2.32□□□□□ -2.04
NUP98P52948 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC2.32□□□□□ -2.04
NUP98P52948 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC2.32□□□□□ -2.04
NUP98P52948 RNU4-62P-201ENST00000410125 130 ntBASIC2.32□□□□□ -2.04
NUP98P52948 LAMTOR3P1-201ENST00000428620 370 ntBASIC2.32□□□□□ -2.04
NUP98P52948 HMGN2P20-201ENST00000437531 273 ntBASIC2.32□□□□□ -2.04
NUP98P52948 RNU6-717P-201ENST00000459076 104 ntBASIC2.32□□□□□ -2.04
NUP98P52948 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC2.32□□□□□ -2.04
NUP98P52948 AC133963.2-201ENST00000513686 578 ntBASIC2.32□□□□□ -2.04
NUP98P52948 RPS3AP23-202ENST00000574601 686 ntBASIC2.32□□□□□ -2.04
NUP98P52948 MIR4474-201ENST00000579189 78 ntBASIC2.32□□□□□ -2.04
NUP98P52948 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC2.32□□□□□ -2.04
NUP98P52948 KATNBL1P1-201ENST00000605192 748 ntBASIC2.32□□□□□ -2.04
NUP98P52948 AC034102.8-201ENST00000615146 484 ntBASIC2.32□□□□□ -2.04
NUP98P52948 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
NUP98P52948 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.32□□□□□ -2.04
NUP98P52948 AC110774.1-201ENST00000623567 2018 ntBASIC2.31□□□□□ -2.04
NUP98P52948 API5P2-201ENST00000397055 1498 ntBASIC2.31□□□□□ -2.04
NUP98P52948 MIRLET7G-201ENST00000362280 84 ntBASIC2.31□□□□□ -2.04
NUP98P52948 RNU6-244P-201ENST00000391028 104 ntBASIC2.31□□□□□ -2.04
NUP98P52948 RNA5SP338-201ENST00000410495 85 ntBASIC2.31□□□□□ -2.04
NUP98P52948 LUZP4P1-201ENST00000415420 344 ntBASIC2.31□□□□□ -2.04
NUP98P52948 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC2.31□□□□□ -2.04
NUP98P52948 AC241520.1-201ENST00000422654 1099 ntBASIC2.31□□□□□ -2.04
NUP98P52948 AC027124.2-201ENST00000428249 105 ntBASIC2.31□□□□□ -2.04
NUP98P52948 CKS1BP5-201ENST00000434172 273 ntBASIC2.31□□□□□ -2.04
NUP98P52948 HSPE1P28-201ENST00000443139 211 ntBASIC2.31□□□□□ -2.04
NUP98P52948 AC009237.8-201ENST00000445492 379 ntBASIC2.31□□□□□ -2.04
NUP98P52948 PTGES3P5-201ENST00000455109 434 ntBASIC2.31□□□□□ -2.04
NUP98P52948 MTND3P6-201ENST00000485242 339 ntBASIC2.31□□□□□ -2.04
NUP98P52948 AC107393.1-201ENST00000512403 346 ntBASIC2.31□□□□□ -2.04
NUP98P52948 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC2.31□□□□□ -2.04
NUP98P52948 EMP1-206ENST00000537612 505 ntTSL 3 BASIC2.31□□□□□ -2.04
NUP98P52948 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC2.31□□□□□ -2.04
NUP98P52948 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC2.31□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 100.9 ms