Protein–RNA interactions for Protein: P49959

MRE11, Double-strand break repair protein MRE11, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11P49959 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC4.93□□□□□ -1.62
MRE11P49959 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC4.93□□□□□ -1.62
MRE11P49959 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC4.93□□□□□ -1.62
MRE11P49959 AL589872.1-201ENST00000426602 288 ntBASIC4.93□□□□□ -1.62
MRE11P49959 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC4.93□□□□□ -1.62
MRE11P49959 ATP5HP2-201ENST00000433885 485 ntBASIC4.93□□□□□ -1.62
MRE11P49959 AC002486.1-201ENST00000435098 391 ntBASIC4.93□□□□□ -1.62
MRE11P49959 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC4.93□□□□□ -1.62
MRE11P49959 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC4.93□□□□□ -1.62
MRE11P49959 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC4.93□□□□□ -1.62
MRE11P49959 ARPC3P5-201ENST00000448802 534 ntBASIC4.93□□□□□ -1.62
MRE11P49959 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC4.93□□□□□ -1.62
MRE11P49959 HMGN1P12-201ENST00000499125 195 ntBASIC4.93□□□□□ -1.62
MRE11P49959 TMEM251P1-201ENST00000503717 318 ntBASIC4.93□□□□□ -1.62
MRE11P49959 AC006390.1-201ENST00000508068 283 ntBASIC4.93□□□□□ -1.62
MRE11P49959 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC4.93□□□□□ -1.62
MRE11P49959 RNU6-1003P-201ENST00000517099 105 ntBASIC4.93□□□□□ -1.62
MRE11P49959 AL512310.1-201ENST00000548639 172 ntBASIC4.93□□□□□ -1.62
MRE11P49959 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC4.93□□□□□ -1.62
MRE11P49959 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC4.93□□□□□ -1.62
MRE11P49959 HSPE1P3-201ENST00000559254 309 ntBASIC4.93□□□□□ -1.62
MRE11P49959 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC4.93□□□□□ -1.62
MRE11P49959 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC4.93□□□□□ -1.62
MRE11P49959 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC4.93□□□□□ -1.62
MRE11P49959 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC4.93□□□□□ -1.62
MRE11P49959 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC4.93□□□□□ -1.62
MRE11P49959 CKS1BP3-201ENST00000600888 237 ntBASIC4.93□□□□□ -1.62
MRE11P49959 AC073091.2-201ENST00000603205 907 ntBASIC4.93□□□□□ -1.62
MRE11P49959 AC245014.2-201ENST00000603689 287 ntBASIC4.93□□□□□ -1.62
MRE11P49959 AC246785.4-201ENST00000605374 287 ntBASIC4.93□□□□□ -1.62
MRE11P49959 AL591034.3-201ENST00000605511 685 ntBASIC4.93□□□□□ -1.62
MRE11P49959 AP002907.1-201ENST00000606361 1430 ntBASIC4.93□□□□□ -1.62
MRE11P49959 AC011816.2-201ENST00000607089 556 ntBASIC4.93□□□□□ -1.62
MRE11P49959 AP006248.2-201ENST00000623309 592 ntBASIC4.93□□□□□ -1.62
MRE11P49959 AC093648.1-201ENST00000623546 606 ntBASIC4.93□□□□□ -1.62
MRE11P49959 AC091905.1-201ENST00000624400 311 ntBASIC4.93□□□□□ -1.62
MRE11P49959 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC4.93□□□□□ -1.62
MRE11P49959 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
MRE11P49959 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
MRE11P49959 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
MRE11P49959 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC4.92□□□□□ -1.62
MRE11P49959 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
MRE11P49959 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
MRE11P49959 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC4.92□□□□□ -1.62
MRE11P49959 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
MRE11P49959 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC4.92□□□□□ -1.62
MRE11P49959 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC4.92□□□□□ -1.62
MRE11P49959 GNG5P1-201ENST00000255500 204 ntBASIC4.92□□□□□ -1.62
MRE11P49959 SYF2-202ENST00000354361 926 ntTSL 2 BASIC4.92□□□□□ -1.62
MRE11P49959 RNU6-952P-201ENST00000391164 108 ntBASIC4.92□□□□□ -1.62
MRE11P49959 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
MRE11P49959 PRRC2CP1-201ENST00000404428 159 ntBASIC4.92□□□□□ -1.62
MRE11P49959 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC4.92□□□□□ -1.62
MRE11P49959 RHEBP3-201ENST00000411920 351 ntBASIC4.92□□□□□ -1.62
MRE11P49959 AL138785.1-201ENST00000425821 331 ntBASIC4.92□□□□□ -1.62
MRE11P49959 OR2B7P-201ENST00000429302 934 ntBASIC4.92□□□□□ -1.62
MRE11P49959 AC007389.2-201ENST00000434630 306 ntBASIC4.92□□□□□ -1.62
MRE11P49959 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC4.92□□□□□ -1.62
MRE11P49959 RPL17P49-201ENST00000443728 411 ntBASIC4.92□□□□□ -1.62
MRE11P49959 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC4.92□□□□□ -1.62
MRE11P49959 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC4.92□□□□□ -1.62
MRE11P49959 AC010301.1-201ENST00000473936 355 ntBASIC4.92□□□□□ -1.62
MRE11P49959 FAM172BP-201ENST00000487497 1089 ntBASIC4.92□□□□□ -1.62
MRE11P49959 RPL35P6-201ENST00000490024 372 ntBASIC4.92□□□□□ -1.62
MRE11P49959 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC4.92□□□□□ -1.62
MRE11P49959 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC4.92□□□□□ -1.62
MRE11P49959 AC018710.1-201ENST00000506509 158 ntBASIC4.92□□□□□ -1.62
MRE11P49959 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC4.92□□□□□ -1.62
MRE11P49959 AC034159.1-201ENST00000513885 583 ntBASIC4.92□□□□□ -1.62
MRE11P49959 GMPSP1-201ENST00000514075 579 ntBASIC4.92□□□□□ -1.62
MRE11P49959 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC4.92□□□□□ -1.62
MRE11P49959 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC4.92□□□□□ -1.62
MRE11P49959 AC084783.1-201ENST00000565846 910 ntBASIC4.92□□□□□ -1.62
MRE11P49959 NF1P5-201ENST00000588287 448 ntBASIC4.92□□□□□ -1.62
MRE11P49959 AL391646.1-201ENST00000603860 190 ntBASIC4.92□□□□□ -1.62
MRE11P49959 AL445264.1-201ENST00000621719 171 ntBASIC4.92□□□□□ -1.62
MRE11P49959 AC009268.2-201ENST00000621925 457 ntBASIC4.92□□□□□ -1.62
MRE11P49959 AP000843.1-201ENST00000624880 701 ntBASIC4.92□□□□□ -1.62
MRE11P49959 CR392039.4-201ENST00000624968 501 ntBASIC4.92□□□□□ -1.62
MRE11P49959 MTND5P17-201ENST00000418405 1603 ntBASIC4.92□□□□□ -1.62
MRE11P49959 AC092162.3-201ENST00000624511 1624 ntBASIC4.92□□□□□ -1.62
MRE11P49959 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC4.92□□□□□ -1.62
MRE11P49959 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
MRE11P49959 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
MRE11P49959 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC4.91□□□□□ -1.62
MRE11P49959 SPATA31D2P-201ENST00000429999 4388 ntBASIC4.91□□□□□ -1.62
MRE11P49959 XGY1-201ENST00000381172 446 ntBASIC4.91□□□□□ -1.62
MRE11P49959 RNA5SP397-201ENST00000391323 118 ntBASIC4.91□□□□□ -1.62
MRE11P49959 RPA3-203ENST00000401447 414 ntTSL 3 BASIC4.91□□□□□ -1.62
MRE11P49959 RPS20P2-201ENST00000402520 389 ntBASIC4.91□□□□□ -1.62
MRE11P49959 AL356776.1-201ENST00000406574 447 ntBASIC4.91□□□□□ -1.62
MRE11P49959 RPS20P14-201ENST00000412545 360 ntBASIC4.91□□□□□ -1.62
MRE11P49959 PRELID3BP11-201ENST00000414230 479 ntBASIC4.91□□□□□ -1.62
MRE11P49959 NUP35P2-201ENST00000416748 943 ntBASIC4.91□□□□□ -1.62
MRE11P49959 RPL7P2-201ENST00000427639 268 ntBASIC4.91□□□□□ -1.62
MRE11P49959 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC4.91□□□□□ -1.62
MRE11P49959 RPL22P17-201ENST00000438729 315 ntBASIC4.91□□□□□ -1.62
MRE11P49959 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC4.91□□□□□ -1.62
MRE11P49959 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
MRE11P49959 RAD51AP1P1-201ENST00000484195 1001 ntBASIC4.91□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 102.1 ms