Protein–RNA interactions for Protein: P35716

SOX11, Transcription factor SOX-11, humanhuman

Predictions only

Length 441 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX11P35716 Y_RNA.687-201ENST00000516558 91 ntBASIC5.65□□□□□ -1.5
SOX11P35716 RNU7-4P-201ENST00000516961 62 ntBASIC5.65□□□□□ -1.5
SOX11P35716 RNU4-60P-201ENST00000517239 135 ntBASIC5.65□□□□□ -1.5
SOX11P35716 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
SOX11P35716 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC5.65□□□□□ -1.5
SOX11P35716 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC5.65□□□□□ -1.5
SOX11P35716 AL132800.1-201ENST00000555109 698 ntTSL 5 BASIC5.65□□□□□ -1.5
SOX11P35716 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC5.65□□□□□ -1.5
SOX11P35716 HMGB3P26-201ENST00000560051 582 ntBASIC5.65□□□□□ -1.5
SOX11P35716 AC022968.1-201ENST00000567372 442 ntBASIC5.65□□□□□ -1.5
SOX11P35716 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC5.65□□□□□ -1.5
SOX11P35716 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
SOX11P35716 AC011476.3-202ENST00000586845 553 ntTSL 3 BASIC5.65□□□□□ -1.5
SOX11P35716 MRO-208ENST00000588444 866 ntTSL 3 BASIC5.65□□□□□ -1.5
SOX11P35716 AC008750.7-201ENST00000600765 559 ntTSL 4 BASIC5.65□□□□□ -1.5
SOX11P35716 AC098826.3-201ENST00000603823 466 ntBASIC5.65□□□□□ -1.5
SOX11P35716 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC5.65□□□□□ -1.5
SOX11P35716 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC5.65□□□□□ -1.5
SOX11P35716 FP236240.3-201ENST00000623061 327 ntBASIC5.65□□□□□ -1.5
SOX11P35716 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
SOX11P35716 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
SOX11P35716 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC5.65□□□□□ -1.51
SOX11P35716 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC5.65□□□□□ -1.51
SOX11P35716 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
SOX11P35716 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC5.65□□□□□ -1.51
SOX11P35716 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
SOX11P35716 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
SOX11P35716 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
SOX11P35716 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
SOX11P35716 NCAPGP1-201ENST00000505112 1814 ntBASIC5.64□□□□□ -1.51
SOX11P35716 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
SOX11P35716 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
SOX11P35716 AC025470.1-201ENST00000510053 2032 ntBASIC5.64□□□□□ -1.51
SOX11P35716 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC5.64□□□□□ -1.51
SOX11P35716 ERVFRD-3-201ENST00000578561 1617 ntBASIC5.64□□□□□ -1.51
SOX11P35716 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
SOX11P35716 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
SOX11P35716 RNA5SP510-201ENST00000364697 99 ntBASIC5.64□□□□□ -1.51
SOX11P35716 RNA5SP235-201ENST00000365411 114 ntBASIC5.64□□□□□ -1.51
SOX11P35716 BPHL-201ENST00000380368 797 ntTSL 5 BASIC5.64□□□□□ -1.51
SOX11P35716 AL109941.1-201ENST00000401925 229 ntBASIC5.64□□□□□ -1.51
SOX11P35716 AL138885.1-201ENST00000405921 675 ntBASIC5.64□□□□□ -1.51
SOX11P35716 AL096829.1-201ENST00000413677 457 ntBASIC5.64□□□□□ -1.51
SOX11P35716 GAS5-202ENST00000414075 413 ntTSL 2 BASIC5.64□□□□□ -1.51
SOX11P35716 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC5.64□□□□□ -1.51
SOX11P35716 OR2AH1P-201ENST00000425717 928 ntBASIC5.64□□□□□ -1.51
SOX11P35716 RPL7P2-201ENST00000427639 268 ntBASIC5.64□□□□□ -1.51
SOX11P35716 AC093414.1-201ENST00000434712 514 ntBASIC5.64□□□□□ -1.51
SOX11P35716 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC5.64□□□□□ -1.51
SOX11P35716 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
SOX11P35716 PPIAP20-201ENST00000449839 135 ntBASIC5.64□□□□□ -1.51
SOX11P35716 SDC4P-201ENST00000453285 601 ntBASIC5.64□□□□□ -1.51
SOX11P35716 ACA64.1-201ENST00000459171 127 ntBASIC5.64□□□□□ -1.51
SOX11P35716 AC007998.1-201ENST00000474156 672 ntBASIC5.64□□□□□ -1.51
SOX11P35716 RN7SL717P-201ENST00000478343 297 ntBASIC5.64□□□□□ -1.51
SOX11P35716 RN7SL193P-201ENST00000491708 276 ntBASIC5.64□□□□□ -1.51
SOX11P35716 AC022493.1-201ENST00000492984 337 ntBASIC5.64□□□□□ -1.51
SOX11P35716 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC5.64□□□□□ -1.51
SOX11P35716 AC104109.1-201ENST00000498563 436 ntBASIC5.64□□□□□ -1.51
SOX11P35716 AC083829.1-201ENST00000503756 657 ntBASIC5.64□□□□□ -1.51
SOX11P35716 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC5.64□□□□□ -1.51
SOX11P35716 RNU1-86P-201ENST00000516108 154 ntBASIC5.64□□□□□ -1.51
SOX11P35716 SNORA40.14-201ENST00000516543 86 ntBASIC5.64□□□□□ -1.51
SOX11P35716 RNU1-107P-201ENST00000516617 154 ntBASIC5.64□□□□□ -1.51
SOX11P35716 IGKV2D-23-201ENST00000518179 286 ntBASIC5.64□□□□□ -1.51
SOX11P35716 IGKV1OR22-1-201ENST00000521497 360 ntBASIC5.64□□□□□ -1.51
SOX11P35716 IGHV3-76-201ENST00000522465 295 ntBASIC5.64□□□□□ -1.51
SOX11P35716 AC136777.2-201ENST00000522979 358 ntBASIC5.64□□□□□ -1.51
SOX11P35716 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
SOX11P35716 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC5.64□□□□□ -1.51
SOX11P35716 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC5.64□□□□□ -1.51
SOX11P35716 AL157871.3-201ENST00000557231 293 ntBASIC5.64□□□□□ -1.51
SOX11P35716 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC5.64□□□□□ -1.51
SOX11P35716 AC130371.1-201ENST00000577023 230 ntTSL 5 BASIC5.64□□□□□ -1.51
SOX11P35716 MIR6793-201ENST00000612376 63 ntBASIC5.64□□□□□ -1.51
SOX11P35716 MIR1244-1-201ENST00000612829 85 ntBASIC5.64□□□□□ -1.51
SOX11P35716 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC5.64□□□□□ -1.51
SOX11P35716 AC078938.1-201ENST00000620993 318 ntBASIC5.64□□□□□ -1.51
SOX11P35716 AC138627.2-201ENST00000624202 601 ntBASIC5.64□□□□□ -1.51
SOX11P35716 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC5.64□□□□□ -1.51
SOX11P35716 MIR1244-3-201ENST00000635744 85 ntBASIC5.64□□□□□ -1.51
SOX11P35716 MIR1244-2-201ENST00000636449 85 ntBASIC5.64□□□□□ -1.51
SOX11P35716 MIR1244-4-202ENST00000636813 85 ntBASIC5.64□□□□□ -1.51
SOX11P35716 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
SOX11P35716 MTND5P7-201ENST00000413558 1798 ntBASIC5.64□□□□□ -1.51
SOX11P35716 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
SOX11P35716 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
SOX11P35716 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC5.64□□□□□ -1.51
SOX11P35716 DDAH1-204ENST00000535924 3909 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
SOX11P35716 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
SOX11P35716 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
SOX11P35716 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
SOX11P35716 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
SOX11P35716 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
SOX11P35716 AL353796.1-201ENST00000561542 3241 ntBASIC5.63□□□□□ -1.51
SOX11P35716 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
SOX11P35716 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
SOX11P35716 AC114774.1-201ENST00000507410 1770 ntBASIC5.63□□□□□ -1.51
SOX11P35716 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
SOX11P35716 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC5.63□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 102 ms