Protein–RNA interactions for Protein: O95749

GGPS1, Geranylgeranyl pyrophosphate synthase, humanhuman

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1O95749 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.7□□□□□ -1.82
GGPS1O95749 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
GGPS1O95749 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.7□□□□□ -1.82
GGPS1O95749 AC011477.1-204ENST00000623416 1325 ntBASIC3.7□□□□□ -1.82
GGPS1O95749 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.69□□□□□ -1.82
GGPS1O95749 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
GGPS1O95749 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC3.69□□□□□ -1.82
GGPS1O95749 AL353743.1-202ENST00000431724 1695 ntBASIC3.69□□□□□ -1.82
GGPS1O95749 ZNF876P-202ENST00000398732 1485 ntBASIC3.69□□□□□ -1.82
GGPS1O95749 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
GGPS1O95749 GNG5P1-201ENST00000255500 204 ntBASIC3.69□□□□□ -1.82
GGPS1O95749 FAM133CP-201ENST00000332869 704 ntBASIC3.69□□□□□ -1.82
GGPS1O95749 RNA5-8SP4-201ENST00000365096 150 ntBASIC3.69□□□□□ -1.82
GGPS1O95749 RNU6-882P-201ENST00000391025 103 ntBASIC3.69□□□□□ -1.82
GGPS1O95749 RNU4-47P-201ENST00000410876 114 ntBASIC3.69□□□□□ -1.82
GGPS1O95749 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC3.69□□□□□ -1.82
GGPS1O95749 BEND7P1-201ENST00000422058 457 ntBASIC3.69□□□□□ -1.82
GGPS1O95749 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC3.69□□□□□ -1.82
GGPS1O95749 ZYG11AP1-201ENST00000430329 837 ntBASIC3.69□□□□□ -1.82
GGPS1O95749 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC3.69□□□□□ -1.82
GGPS1O95749 SETP5-201ENST00000437270 562 ntBASIC3.69□□□□□ -1.82
GGPS1O95749 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC3.69□□□□□ -1.82
GGPS1O95749 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC3.69□□□□□ -1.82
GGPS1O95749 AC004866.2-201ENST00000438285 481 ntBASIC3.69□□□□□ -1.82
GGPS1O95749 MTND5P14-201ENST00000441481 1267 ntBASIC3.69□□□□□ -1.82
GGPS1O95749 Z73417.1-201ENST00000447373 778 ntBASIC3.69□□□□□ -1.82
GGPS1O95749 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC3.69□□□□□ -1.82
GGPS1O95749 AC010468.1-201ENST00000461022 817 ntBASIC3.69□□□□□ -1.82
GGPS1O95749 RPS4XP22-201ENST00000480755 780 ntBASIC3.69□□□□□ -1.82
GGPS1O95749 FAM172BP-201ENST00000487497 1089 ntBASIC3.69□□□□□ -1.82
GGPS1O95749 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC3.69□□□□□ -1.82
GGPS1O95749 THAP6-203ENST00000502620 582 ntTSL 3 BASIC3.69□□□□□ -1.82
GGPS1O95749 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC3.69□□□□□ -1.82
GGPS1O95749 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC3.69□□□□□ -1.82
GGPS1O95749 GMPSP1-201ENST00000514075 579 ntBASIC3.69□□□□□ -1.82
GGPS1O95749 AC107934.2-201ENST00000518653 310 ntBASIC3.69□□□□□ -1.82
GGPS1O95749 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC3.69□□□□□ -1.82
GGPS1O95749 OR6C7P-201ENST00000547875 934 ntBASIC3.69□□□□□ -1.82
GGPS1O95749 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.69□□□□□ -1.82
GGPS1O95749 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC3.69□□□□□ -1.82
GGPS1O95749 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC3.69□□□□□ -1.82
GGPS1O95749 MIR4325-201ENST00000583049 90 ntBASIC3.69□□□□□ -1.82
GGPS1O95749 AP001029.3-201ENST00000588063 596 ntBASIC3.69□□□□□ -1.82
GGPS1O95749 BDH2P1-201ENST00000602288 736 ntBASIC3.69□□□□□ -1.82
GGPS1O95749 BBIP1P1-201ENST00000602999 279 ntBASIC3.69□□□□□ -1.82
GGPS1O95749 AC006254.3-201ENST00000603353 884 ntBASIC3.69□□□□□ -1.82
GGPS1O95749 AL022099.1-201ENST00000604551 712 ntBASIC3.69□□□□□ -1.82
GGPS1O95749 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC3.69□□□□□ -1.82
GGPS1O95749 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC3.69□□□□□ -1.82
GGPS1O95749 XIST_intron.1-201ENST00000619444 68 ntBASIC3.69□□□□□ -1.82
GGPS1O95749 AP002782.1-201ENST00000623107 614 ntBASIC3.69□□□□□ -1.82
GGPS1O95749 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
GGPS1O95749 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
GGPS1O95749 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.69□□□□□ -1.82
GGPS1O95749 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC3.68□□□□□ -1.82
GGPS1O95749 THUMPD3P1-201ENST00000506556 1480 ntBASIC3.68□□□□□ -1.82
GGPS1O95749 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
GGPS1O95749 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.68□□□□□ -1.82
GGPS1O95749 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.68□□□□□ -1.82
GGPS1O95749 AC002546.1-201ENST00000588041 2504 ntBASIC3.68□□□□□ -1.82
GGPS1O95749 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
GGPS1O95749 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
GGPS1O95749 RNA5SP295-201ENST00000362655 121 ntBASIC3.68□□□□□ -1.82
GGPS1O95749 RNU6-173P-201ENST00000364215 104 ntBASIC3.68□□□□□ -1.82
GGPS1O95749 RNU6-157P-201ENST00000383957 107 ntBASIC3.68□□□□□ -1.82
GGPS1O95749 MIR135A2-201ENST00000384854 100 ntBASIC3.68□□□□□ -1.82
GGPS1O95749 AL136372.1-201ENST00000403060 228 ntBASIC3.68□□□□□ -1.82
GGPS1O95749 RNU6-757P-201ENST00000410334 100 ntBASIC3.68□□□□□ -1.82
GGPS1O95749 RNU4-65P-201ENST00000410473 140 ntBASIC3.68□□□□□ -1.82
GGPS1O95749 RPS15AP38-201ENST00000413110 372 ntBASIC3.68□□□□□ -1.82
GGPS1O95749 AC009237.5-201ENST00000414271 501 ntBASIC3.68□□□□□ -1.82
GGPS1O95749 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC3.68□□□□□ -1.82
GGPS1O95749 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC3.68□□□□□ -1.82
GGPS1O95749 YPEL5P1-201ENST00000419731 367 ntBASIC3.68□□□□□ -1.82
GGPS1O95749 AC006960.1-201ENST00000419980 153 ntBASIC3.68□□□□□ -1.82
GGPS1O95749 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC3.68□□□□□ -1.82
GGPS1O95749 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC3.68□□□□□ -1.82
GGPS1O95749 RABEPKP1-201ENST00000440529 1026 ntBASIC3.68□□□□□ -1.82
GGPS1O95749 AC002381.1-201ENST00000447049 280 ntBASIC3.68□□□□□ -1.82
GGPS1O95749 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC3.68□□□□□ -1.82
GGPS1O95749 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC3.68□□□□□ -1.82
GGPS1O95749 MEMO1P3-201ENST00000459811 302 ntBASIC3.68□□□□□ -1.82
GGPS1O95749 AC109925.1-201ENST00000478069 331 ntBASIC3.68□□□□□ -1.82
GGPS1O95749 RPS3AP43-201ENST00000479743 781 ntBASIC3.68□□□□□ -1.82
GGPS1O95749 TAF8-207ENST00000482432 556 ntTSL 2 BASIC3.68□□□□□ -1.82
GGPS1O95749 RPL7P23-201ENST00000493874 747 ntBASIC3.68□□□□□ -1.82
GGPS1O95749 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC3.68□□□□□ -1.82
GGPS1O95749 RNU1-61P-201ENST00000516107 151 ntBASIC3.68□□□□□ -1.82
GGPS1O95749 RNU5A-4P-201ENST00000516588 111 ntBASIC3.68□□□□□ -1.82
GGPS1O95749 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC3.68□□□□□ -1.82
GGPS1O95749 AC004024.1-201ENST00000549244 247 ntBASIC3.68□□□□□ -1.82
GGPS1O95749 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC3.68□□□□□ -1.82
GGPS1O95749 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC3.68□□□□□ -1.82
GGPS1O95749 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.68□□□□□ -1.82
GGPS1O95749 AC106782.4-201ENST00000568264 210 ntBASIC3.68□□□□□ -1.82
GGPS1O95749 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC3.68□□□□□ -1.82
GGPS1O95749 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC3.68□□□□□ -1.82
GGPS1O95749 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC3.68□□□□□ -1.82
GGPS1O95749 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC3.68□□□□□ -1.82
GGPS1O95749 AC061975.8-201ENST00000587058 721 ntBASIC3.68□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 80.7 ms