Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 AL049555.1-201ENST00000562834 1933 ntBASIC5.4□□□□□ -1.55
RAPGEF3O95398 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
RAPGEF3O95398 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
RAPGEF3O95398 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
RAPGEF3O95398 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
RAPGEF3O95398 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
RAPGEF3O95398 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC5.39□□□□□ -1.55
RAPGEF3O95398 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
RAPGEF3O95398 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
RAPGEF3O95398 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC5.39□□□□□ -1.55
RAPGEF3O95398 AC017079.2-201ENST00000416102 485 ntBASIC5.39□□□□□ -1.55
RAPGEF3O95398 RPL30P3-201ENST00000424262 333 ntBASIC5.39□□□□□ -1.55
RAPGEF3O95398 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC5.39□□□□□ -1.55
RAPGEF3O95398 MTND3P21-201ENST00000433774 331 ntBASIC5.39□□□□□ -1.55
RAPGEF3O95398 MTND1P1-201ENST00000445453 368 ntBASIC5.39□□□□□ -1.55
RAPGEF3O95398 AC002381.1-201ENST00000447049 280 ntBASIC5.39□□□□□ -1.55
RAPGEF3O95398 AC006480.1-201ENST00000449887 378 ntBASIC5.39□□□□□ -1.55
RAPGEF3O95398 AL590365.1-201ENST00000450788 243 ntBASIC5.39□□□□□ -1.55
RAPGEF3O95398 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC5.39□□□□□ -1.55
RAPGEF3O95398 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
RAPGEF3O95398 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC5.39□□□□□ -1.55
RAPGEF3O95398 OR5M7P-201ENST00000526140 972 ntBASIC5.39□□□□□ -1.55
RAPGEF3O95398 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC5.39□□□□□ -1.55
RAPGEF3O95398 AC034105.3-201ENST00000565294 442 ntBASIC5.39□□□□□ -1.55
RAPGEF3O95398 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC5.39□□□□□ -1.55
RAPGEF3O95398 MIR4801-201ENST00000582704 82 ntBASIC5.39□□□□□ -1.55
RAPGEF3O95398 AC104984.5-201ENST00000586878 94 ntBASIC5.39□□□□□ -1.55
RAPGEF3O95398 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC5.39□□□□□ -1.55
RAPGEF3O95398 AL022154.1-201ENST00000604698 785 ntBASIC5.39□□□□□ -1.55
RAPGEF3O95398 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC5.39□□□□□ -1.55
RAPGEF3O95398 AC103710.1-201ENST00000610003 901 ntBASIC5.39□□□□□ -1.55
RAPGEF3O95398 AC000123.2-201ENST00000623124 461 ntBASIC5.39□□□□□ -1.55
RAPGEF3O95398 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC5.39□□□□□ -1.55
RAPGEF3O95398 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
RAPGEF3O95398 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
RAPGEF3O95398 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
RAPGEF3O95398 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC5.39□□□□□ -1.55
RAPGEF3O95398 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
RAPGEF3O95398 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC5.39□□□□□ -1.55
RAPGEF3O95398 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC5.38□□□□□ -1.55
RAPGEF3O95398 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
RAPGEF3O95398 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
RAPGEF3O95398 RNU6-878P-201ENST00000384578 110 ntBASIC5.38□□□□□ -1.55
RAPGEF3O95398 SNORD115.1-201ENST00000391109 76 ntBASIC5.38□□□□□ -1.55
RAPGEF3O95398 BTBD10P2-201ENST00000404779 676 ntBASIC5.38□□□□□ -1.55
RAPGEF3O95398 Y_RNA.608-201ENST00000410647 95 ntBASIC5.38□□□□□ -1.55
RAPGEF3O95398 AL138785.1-201ENST00000425821 331 ntBASIC5.38□□□□□ -1.55
RAPGEF3O95398 BX890604.2-201ENST00000427883 474 ntBASIC5.38□□□□□ -1.55
RAPGEF3O95398 AL158071.1-201ENST00000430315 461 ntBASIC5.38□□□□□ -1.55
RAPGEF3O95398 KCTD9P3-201ENST00000434597 1169 ntBASIC5.38□□□□□ -1.55
RAPGEF3O95398 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC5.38□□□□□ -1.55
RAPGEF3O95398 DNAJC19P4-201ENST00000440115 345 ntBASIC5.38□□□□□ -1.55
RAPGEF3O95398 AL022238.1-201ENST00000442557 355 ntBASIC5.38□□□□□ -1.55
RAPGEF3O95398 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC5.38□□□□□ -1.55
RAPGEF3O95398 RPL7P36-201ENST00000444633 681 ntBASIC5.38□□□□□ -1.55
RAPGEF3O95398 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC5.38□□□□□ -1.55
RAPGEF3O95398 HMGB3P21-201ENST00000452483 547 ntBASIC5.38□□□□□ -1.55
RAPGEF3O95398 AC126182.1-201ENST00000478134 357 ntBASIC5.38□□□□□ -1.55
RAPGEF3O95398 RPL31P61-201ENST00000496160 376 ntBASIC5.38□□□□□ -1.55
RAPGEF3O95398 AC093767.1-201ENST00000504523 156 ntBASIC5.38□□□□□ -1.55
RAPGEF3O95398 AC139783.2-201ENST00000504847 1145 ntBASIC5.38□□□□□ -1.55
RAPGEF3O95398 AC010486.1-201ENST00000511793 424 ntBASIC5.38□□□□□ -1.55
RAPGEF3O95398 MTND4LP26-201ENST00000518144 282 ntBASIC5.38□□□□□ -1.55
RAPGEF3O95398 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC5.38□□□□□ -1.55
RAPGEF3O95398 AL353997.4-201ENST00000586196 166 ntBASIC5.38□□□□□ -1.55
RAPGEF3O95398 RPL12P50-201ENST00000603116 116 ntBASIC5.38□□□□□ -1.55
RAPGEF3O95398 AL359999.1-201ENST00000604513 294 ntBASIC5.38□□□□□ -1.55
RAPGEF3O95398 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC5.38□□□□□ -1.55
RAPGEF3O95398 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
RAPGEF3O95398 BCLAF1P2-201ENST00000624956 2609 ntBASIC5.38□□□□□ -1.55
RAPGEF3O95398 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
RAPGEF3O95398 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
RAPGEF3O95398 ZNF33BP1-201ENST00000452497 1834 ntBASIC5.37□□□□□ -1.55
RAPGEF3O95398 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
RAPGEF3O95398 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
RAPGEF3O95398 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
RAPGEF3O95398 RNU6-809P-201ENST00000384461 107 ntBASIC5.37□□□□□ -1.55
RAPGEF3O95398 HMGB3P23-201ENST00000414981 585 ntBASIC5.37□□□□□ -1.55
RAPGEF3O95398 AC012065.2-201ENST00000421295 375 ntBASIC5.37□□□□□ -1.55
RAPGEF3O95398 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC5.37□□□□□ -1.55
RAPGEF3O95398 PGBD4P3-201ENST00000440731 581 ntBASIC5.37□□□□□ -1.55
RAPGEF3O95398 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC5.37□□□□□ -1.55
RAPGEF3O95398 RNA5SP103-201ENST00000459503 118 ntBASIC5.37□□□□□ -1.55
RAPGEF3O95398 HMGB1P21-201ENST00000502313 581 ntBASIC5.37□□□□□ -1.55
RAPGEF3O95398 AC025554.1-201ENST00000505641 188 ntBASIC5.37□□□□□ -1.55
RAPGEF3O95398 AC109927.2-201ENST00000506416 303 ntBASIC5.37□□□□□ -1.55
RAPGEF3O95398 RNU6-1178P-201ENST00000516674 107 ntBASIC5.37□□□□□ -1.55
RAPGEF3O95398 RNU6-1003P-201ENST00000517099 105 ntBASIC5.37□□□□□ -1.55
RAPGEF3O95398 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC5.37□□□□□ -1.55
RAPGEF3O95398 AC092470.1-201ENST00000546187 132 ntBASIC5.37□□□□□ -1.55
RAPGEF3O95398 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC5.37□□□□□ -1.55
RAPGEF3O95398 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC5.37□□□□□ -1.55
RAPGEF3O95398 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC5.37□□□□□ -1.55
RAPGEF3O95398 AL008729.2-201ENST00000606393 473 ntBASIC5.37□□□□□ -1.55
RAPGEF3O95398 AC091834.1-201ENST00000614543 472 ntBASIC5.37□□□□□ -1.55
RAPGEF3O95398 AC008250.2-201ENST00000615261 205 ntBASIC5.37□□□□□ -1.55
RAPGEF3O95398 AC104010.1-201ENST00000616889 150 ntBASIC5.37□□□□□ -1.55
RAPGEF3O95398 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC5.37□□□□□ -1.55
RAPGEF3O95398 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC5.37□□□□□ -1.55
RAPGEF3O95398 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC5.37□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 104.3 ms