Protein–RNA interactions for Protein: O60840

CACNA1F, Voltage-dependent L-type calcium channel subunit alpha-1F, humanhuman

Predictions only

Length 1,977 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1FO60840 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.55□□□□□ -1.84
CACNA1FO60840 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC3.55□□□□□ -1.84
CACNA1FO60840 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.55□□□□□ -1.84
CACNA1FO60840 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
CACNA1FO60840 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC3.55□□□□□ -1.84
CACNA1FO60840 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC3.55□□□□□ -1.84
CACNA1FO60840 SNORA40.2-201ENST00000390847 128 ntBASIC3.55□□□□□ -1.84
CACNA1FO60840 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
CACNA1FO60840 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC3.55□□□□□ -1.84
CACNA1FO60840 AL121978.1-201ENST00000402778 359 ntBASIC3.55□□□□□ -1.84
CACNA1FO60840 MTCO3P31-201ENST00000405526 789 ntBASIC3.55□□□□□ -1.84
CACNA1FO60840 AC027644.1-201ENST00000419595 298 ntBASIC3.55□□□□□ -1.84
CACNA1FO60840 AL139281.1-201ENST00000422120 335 ntBASIC3.55□□□□□ -1.84
CACNA1FO60840 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC3.55□□□□□ -1.84
CACNA1FO60840 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.55□□□□□ -1.84
CACNA1FO60840 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC3.55□□□□□ -1.84
CACNA1FO60840 AL606662.1-201ENST00000445763 553 ntBASIC3.55□□□□□ -1.84
CACNA1FO60840 CACYBPP2-201ENST00000453625 678 ntBASIC3.55□□□□□ -1.84
CACNA1FO60840 BZW1P2-201ENST00000473537 826 ntBASIC3.55□□□□□ -1.84
CACNA1FO60840 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC3.55□□□□□ -1.84
CACNA1FO60840 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
CACNA1FO60840 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC3.55□□□□□ -1.84
CACNA1FO60840 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC3.55□□□□□ -1.84
CACNA1FO60840 RN7SKP272-201ENST00000516988 232 ntBASIC3.55□□□□□ -1.84
CACNA1FO60840 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC3.55□□□□□ -1.84
CACNA1FO60840 RGS4-207ENST00000527809 817 ntTSL 4 BASIC3.55□□□□□ -1.84
CACNA1FO60840 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC3.55□□□□□ -1.84
CACNA1FO60840 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC3.55□□□□□ -1.84
CACNA1FO60840 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC3.55□□□□□ -1.84
CACNA1FO60840 NIFKP8-201ENST00000560500 874 ntBASIC3.55□□□□□ -1.84
CACNA1FO60840 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC3.55□□□□□ -1.84
CACNA1FO60840 VN1R84P-201ENST00000593697 235 ntBASIC3.55□□□□□ -1.84
CACNA1FO60840 CLPTM1LP1-201ENST00000604519 484 ntBASIC3.55□□□□□ -1.84
CACNA1FO60840 HNRNPDLP4-201ENST00000605144 301 ntBASIC3.55□□□□□ -1.84
CACNA1FO60840 AC010680.4-201ENST00000605334 543 ntBASIC3.55□□□□□ -1.84
CACNA1FO60840 AC011472.4-201ENST00000615848 491 ntBASIC3.55□□□□□ -1.84
CACNA1FO60840 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC3.55□□□□□ -1.84
CACNA1FO60840 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.55□□□□□ -1.84
CACNA1FO60840 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
CACNA1FO60840 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
CACNA1FO60840 AC007529.1-201ENST00000418574 2178 ntBASIC3.55□□□□□ -1.84
CACNA1FO60840 AC025125.1-201ENST00000624743 1922 ntBASIC3.54□□□□□ -1.84
CACNA1FO60840 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
CACNA1FO60840 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
CACNA1FO60840 SNORD113-6-201ENST00000363345 75 ntBASIC3.54□□□□□ -1.84
CACNA1FO60840 Y_RNA.311-201ENST00000365068 96 ntBASIC3.54□□□□□ -1.84
CACNA1FO60840 OR5H15-201ENST00000383696 930 ntBASIC3.54□□□□□ -1.84
CACNA1FO60840 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
CACNA1FO60840 AL021407.1-201ENST00000404531 386 ntBASIC3.54□□□□□ -1.84
CACNA1FO60840 AL365203.2-201ENST00000423444 196 ntBASIC3.54□□□□□ -1.84
CACNA1FO60840 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC3.54□□□□□ -1.84
CACNA1FO60840 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC3.54□□□□□ -1.84
CACNA1FO60840 AL513043.1-201ENST00000439124 535 ntBASIC3.54□□□□□ -1.84
CACNA1FO60840 AL831737.1-201ENST00000441288 271 ntBASIC3.54□□□□□ -1.84
CACNA1FO60840 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.54□□□□□ -1.84
CACNA1FO60840 RNU7-140P-201ENST00000459546 60 ntBASIC3.54□□□□□ -1.84
CACNA1FO60840 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC3.54□□□□□ -1.84
CACNA1FO60840 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC3.54□□□□□ -1.84
CACNA1FO60840 PRELID3BP4-201ENST00000515476 571 ntBASIC3.54□□□□□ -1.84
CACNA1FO60840 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC3.54□□□□□ -1.84
CACNA1FO60840 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
CACNA1FO60840 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC3.54□□□□□ -1.84
CACNA1FO60840 AC243972.3-201ENST00000539655 198 ntBASIC3.54□□□□□ -1.84
CACNA1FO60840 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC3.54□□□□□ -1.84
CACNA1FO60840 CYCSP39-201ENST00000565821 309 ntBASIC3.54□□□□□ -1.84
CACNA1FO60840 AL451007.1-201ENST00000595491 289 ntBASIC3.54□□□□□ -1.84
CACNA1FO60840 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC3.54□□□□□ -1.84
CACNA1FO60840 AL158063.1-201ENST00000615349 536 ntBASIC3.54□□□□□ -1.84
CACNA1FO60840 AP006248.2-201ENST00000623309 592 ntBASIC3.54□□□□□ -1.84
CACNA1FO60840 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC3.54□□□□□ -1.84
CACNA1FO60840 NSRP1P1-201ENST00000444067 1693 ntBASIC3.54□□□□□ -1.84
CACNA1FO60840 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC3.54□□□□□ -1.84
CACNA1FO60840 ANKRD20A17P-201ENST00000511745 1330 ntBASIC3.54□□□□□ -1.84
CACNA1FO60840 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC3.54□□□□□ -1.84
CACNA1FO60840 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC3.54□□□□□ -1.84
CACNA1FO60840 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
CACNA1FO60840 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC3.54□□□□□ -1.84
CACNA1FO60840 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC3.54□□□□□ -1.84
CACNA1FO60840 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
CACNA1FO60840 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC3.54□□□□□ -1.84
CACNA1FO60840 MIR3074-201ENST00000384885 81 ntBASIC3.54□□□□□ -1.84
CACNA1FO60840 ERHP2-201ENST00000402323 299 ntBASIC3.54□□□□□ -1.84
CACNA1FO60840 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
CACNA1FO60840 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC3.54□□□□□ -1.84
CACNA1FO60840 RPS15AP6-201ENST00000420703 385 ntBASIC3.54□□□□□ -1.84
CACNA1FO60840 MTCO2P34-201ENST00000421994 607 ntBASIC3.54□□□□□ -1.84
CACNA1FO60840 AC244035.1-201ENST00000430042 390 ntBASIC3.54□□□□□ -1.84
CACNA1FO60840 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC3.54□□□□□ -1.84
CACNA1FO60840 MTCYBP16-201ENST00000509187 1129 ntBASIC3.54□□□□□ -1.84
CACNA1FO60840 AC010625.1-201ENST00000511296 403 ntBASIC3.54□□□□□ -1.84
CACNA1FO60840 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC3.54□□□□□ -1.84
CACNA1FO60840 MTND3P5-201ENST00000512798 333 ntBASIC3.54□□□□□ -1.84
CACNA1FO60840 AC018797.3-201ENST00000513388 1241 ntBASIC3.54□□□□□ -1.84
CACNA1FO60840 AC105185.1-201ENST00000518705 535 ntBASIC3.54□□□□□ -1.84
CACNA1FO60840 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC3.54□□□□□ -1.84
CACNA1FO60840 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC3.54□□□□□ -1.84
CACNA1FO60840 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC3.54□□□□□ -1.84
CACNA1FO60840 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC3.54□□□□□ -1.84
CACNA1FO60840 OR4K7P-201ENST00000580232 945 ntBASIC3.54□□□□□ -1.84
CACNA1FO60840 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC3.54□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 82.5 ms