Protein–RNA interactions for Protein: A6NDI0

TRIM49B, Putative tripartite motif-containing protein 49B, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49BA6NDI0 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC3.37□□□□□ -1.87
TRIM49BA6NDI0 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC3.37□□□□□ -1.87
TRIM49BA6NDI0 AC145350.1-201ENST00000567426 208 ntBASIC3.37□□□□□ -1.87
TRIM49BA6NDI0 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC3.37□□□□□ -1.87
TRIM49BA6NDI0 MIR5680-201ENST00000577577 84 ntBASIC3.37□□□□□ -1.87
TRIM49BA6NDI0 MIR3200-201ENST00000580767 85 ntBASIC3.37□□□□□ -1.87
TRIM49BA6NDI0 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC3.37□□□□□ -1.87
TRIM49BA6NDI0 AC010738.1-201ENST00000604970 987 ntBASIC3.37□□□□□ -1.87
TRIM49BA6NDI0 AL110115.1-201ENST00000614396 364 ntBASIC3.37□□□□□ -1.87
TRIM49BA6NDI0 AL355810.1-201ENST00000614629 552 ntBASIC3.37□□□□□ -1.87
TRIM49BA6NDI0 AC008083.4-201ENST00000615076 444 ntBASIC3.37□□□□□ -1.87
TRIM49BA6NDI0 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC3.37□□□□□ -1.87
TRIM49BA6NDI0 AC007318.2-201ENST00000620999 243 ntBASIC3.37□□□□□ -1.87
TRIM49BA6NDI0 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC3.37□□□□□ -1.87
TRIM49BA6NDI0 AC087821.2-201ENST00000637086 450 ntBASIC3.37□□□□□ -1.87
TRIM49BA6NDI0 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
TRIM49BA6NDI0 SGO1P2-201ENST00000429458 1589 ntBASIC3.37□□□□□ -1.87
TRIM49BA6NDI0 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.37□□□□□ -1.87
TRIM49BA6NDI0 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
TRIM49BA6NDI0 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
TRIM49BA6NDI0 AC073346.2-201ENST00000624724 2058 ntBASIC3.36□□□□□ -1.87
TRIM49BA6NDI0 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
TRIM49BA6NDI0 RNA5SP267-201ENST00000364893 126 ntBASIC3.36□□□□□ -1.87
TRIM49BA6NDI0 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
TRIM49BA6NDI0 RNU6-413P-201ENST00000384115 107 ntBASIC3.36□□□□□ -1.87
TRIM49BA6NDI0 SNORA54-201ENST00000384281 123 ntBASIC3.36□□□□□ -1.87
TRIM49BA6NDI0 MIR491-201ENST00000384877 84 ntBASIC3.36□□□□□ -1.87
TRIM49BA6NDI0 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.36□□□□□ -1.87
TRIM49BA6NDI0 RNA5SP80-201ENST00000410475 111 ntBASIC3.36□□□□□ -1.87
TRIM49BA6NDI0 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC3.36□□□□□ -1.87
TRIM49BA6NDI0 YPEL5P1-201ENST00000419731 367 ntBASIC3.36□□□□□ -1.87
TRIM49BA6NDI0 MTCO1P3-201ENST00000429327 192 ntBASIC3.36□□□□□ -1.87
TRIM49BA6NDI0 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC3.36□□□□□ -1.87
TRIM49BA6NDI0 GTF2IP7-202ENST00000436677 309 ntBASIC3.36□□□□□ -1.87
TRIM49BA6NDI0 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC3.36□□□□□ -1.87
TRIM49BA6NDI0 AL591503.2-201ENST00000442314 1005 ntBASIC3.36□□□□□ -1.87
TRIM49BA6NDI0 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC3.36□□□□□ -1.87
TRIM49BA6NDI0 RPL17P49-201ENST00000443728 411 ntBASIC3.36□□□□□ -1.87
TRIM49BA6NDI0 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC3.36□□□□□ -1.87
TRIM49BA6NDI0 RPL21P41-201ENST00000459863 264 ntBASIC3.36□□□□□ -1.87
TRIM49BA6NDI0 TAF8-207ENST00000482432 556 ntTSL 2 BASIC3.36□□□□□ -1.87
TRIM49BA6NDI0 AL358832.1-201ENST00000497800 389 ntBASIC3.36□□□□□ -1.87
TRIM49BA6NDI0 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC3.36□□□□□ -1.87
TRIM49BA6NDI0 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
TRIM49BA6NDI0 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC3.36□□□□□ -1.87
TRIM49BA6NDI0 HIGD1AP17-201ENST00000554576 276 ntBASIC3.36□□□□□ -1.87
TRIM49BA6NDI0 AL391156.1-201ENST00000554965 554 ntBASIC3.36□□□□□ -1.87
TRIM49BA6NDI0 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC3.36□□□□□ -1.87
TRIM49BA6NDI0 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC3.36□□□□□ -1.87
TRIM49BA6NDI0 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC3.36□□□□□ -1.87
TRIM49BA6NDI0 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC3.36□□□□□ -1.87
TRIM49BA6NDI0 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC3.36□□□□□ -1.87
TRIM49BA6NDI0 AP000484.1-201ENST00000620067 1252 ntBASIC3.36□□□□□ -1.87
TRIM49BA6NDI0 AC099506.2-201ENST00000623074 221 ntBASIC3.36□□□□□ -1.87
TRIM49BA6NDI0 CYP3A51P-201ENST00000633513 256 ntBASIC3.36□□□□□ -1.87
TRIM49BA6NDI0 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
TRIM49BA6NDI0 MTND5P1-201ENST00000445440 1375 ntBASIC3.36□□□□□ -1.87
TRIM49BA6NDI0 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.36□□□□□ -1.87
TRIM49BA6NDI0 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
TRIM49BA6NDI0 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
TRIM49BA6NDI0 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.35□□□□□ -1.87
TRIM49BA6NDI0 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
TRIM49BA6NDI0 RNU6-492P-201ENST00000363035 104 ntBASIC3.35□□□□□ -1.87
TRIM49BA6NDI0 SNORD113-6-201ENST00000363345 75 ntBASIC3.35□□□□□ -1.87
TRIM49BA6NDI0 SNORD15B-201ENST00000384714 146 ntBASIC3.35□□□□□ -1.87
TRIM49BA6NDI0 RPL17P50-201ENST00000396131 546 ntBASIC3.35□□□□□ -1.87
TRIM49BA6NDI0 TAF9BP1-201ENST00000396646 746 ntBASIC3.35□□□□□ -1.87
TRIM49BA6NDI0 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC3.35□□□□□ -1.87
TRIM49BA6NDI0 CYCSP45-201ENST00000402289 315 ntBASIC3.35□□□□□ -1.87
TRIM49BA6NDI0 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC3.35□□□□□ -1.87
TRIM49BA6NDI0 RPL7P8-201ENST00000411964 730 ntBASIC3.35□□□□□ -1.87
TRIM49BA6NDI0 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.35□□□□□ -1.87
TRIM49BA6NDI0 BOLA3P4-201ENST00000418151 400 ntBASIC3.35□□□□□ -1.87
TRIM49BA6NDI0 RPL21P32-201ENST00000419877 477 ntBASIC3.35□□□□□ -1.87
TRIM49BA6NDI0 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC3.35□□□□□ -1.87
TRIM49BA6NDI0 Z93242.1-201ENST00000427102 353 ntBASIC3.35□□□□□ -1.87
TRIM49BA6NDI0 RABEPKP1-201ENST00000440529 1026 ntBASIC3.35□□□□□ -1.87
TRIM49BA6NDI0 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC3.35□□□□□ -1.87
TRIM49BA6NDI0 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC3.35□□□□□ -1.87
TRIM49BA6NDI0 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
TRIM49BA6NDI0 RPL23AP31-201ENST00000456160 467 ntBASIC3.35□□□□□ -1.87
TRIM49BA6NDI0 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC3.35□□□□□ -1.87
TRIM49BA6NDI0 AC013828.1-201ENST00000481845 158 ntBASIC3.35□□□□□ -1.87
TRIM49BA6NDI0 AC096751.1-202ENST00000502691 1067 ntBASIC3.35□□□□□ -1.87
TRIM49BA6NDI0 AC010486.2-201ENST00000505572 483 ntBASIC3.35□□□□□ -1.87
TRIM49BA6NDI0 AC006390.1-201ENST00000508068 283 ntBASIC3.35□□□□□ -1.87
TRIM49BA6NDI0 KLHL2P1-201ENST00000508691 521 ntBASIC3.35□□□□□ -1.87
TRIM49BA6NDI0 AC113347.3-201ENST00000509113 148 ntBASIC3.35□□□□□ -1.87
TRIM49BA6NDI0 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC3.35□□□□□ -1.87
TRIM49BA6NDI0 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC3.35□□□□□ -1.87
TRIM49BA6NDI0 SNORA70.24-201ENST00000517233 118 ntBASIC3.35□□□□□ -1.87
TRIM49BA6NDI0 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.35□□□□□ -1.87
TRIM49BA6NDI0 SNRPGP16-201ENST00000533275 226 ntBASIC3.35□□□□□ -1.87
TRIM49BA6NDI0 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC3.35□□□□□ -1.87
TRIM49BA6NDI0 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC3.35□□□□□ -1.87
TRIM49BA6NDI0 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC3.35□□□□□ -1.87
TRIM49BA6NDI0 AC068313.1-201ENST00000604028 1008 ntBASIC3.35□□□□□ -1.87
TRIM49BA6NDI0 AC131235.4-201ENST00000609288 620 ntBASIC3.35□□□□□ -1.87
TRIM49BA6NDI0 AC004908.3-201ENST00000610248 625 ntBASIC3.35□□□□□ -1.87
TRIM49BA6NDI0 AL442067.2-201ENST00000614033 363 ntBASIC3.35□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms