Protein–RNA interactions for Protein: Q9Y696

CLIC4, Chloride intracellular channel protein 4, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4Q9Y696 USP49-202ENST00000373010 2446 ntTSL 5 BASIC21.87■■□□□ 1.09
CLIC4Q9Y696 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CLIC4Q9Y696 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
CLIC4Q9Y696 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CLIC4Q9Y696 AL031598.1-201ENST00000561511 1773 ntBASIC21.87■■□□□ 1.09
CLIC4Q9Y696 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
CLIC4Q9Y696 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC21.86■■□□□ 1.09
CLIC4Q9Y696 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CLIC4Q9Y696 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CLIC4Q9Y696 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CLIC4Q9Y696 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC21.86■■□□□ 1.09
CLIC4Q9Y696 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC21.86■■□□□ 1.09
CLIC4Q9Y696 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC21.86■■□□□ 1.09
CLIC4Q9Y696 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC21.86■■□□□ 1.09
CLIC4Q9Y696 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CLIC4Q9Y696 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC21.86■■□□□ 1.09
CLIC4Q9Y696 GOLGA6L5P-202ENST00000515341 1828 ntBASIC21.86■■□□□ 1.09
CLIC4Q9Y696 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC21.86■■□□□ 1.09
CLIC4Q9Y696 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CLIC4Q9Y696 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC21.86■■□□□ 1.09
CLIC4Q9Y696 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC21.86■■□□□ 1.09
CLIC4Q9Y696 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC21.86■■□□□ 1.09
CLIC4Q9Y696 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC21.86■■□□□ 1.09
CLIC4Q9Y696 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
CLIC4Q9Y696 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
CLIC4Q9Y696 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
CLIC4Q9Y696 AC004264.1-201ENST00000608354 794 ntBASIC21.86■■□□□ 1.09
CLIC4Q9Y696 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CLIC4Q9Y696 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC21.86■■□□□ 1.09
CLIC4Q9Y696 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CLIC4Q9Y696 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC21.86■■□□□ 1.09
CLIC4Q9Y696 AC104581.1-202ENST00000635932 2618 ntBASIC21.86■■□□□ 1.09
CLIC4Q9Y696 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC21.86■■□□□ 1.09
CLIC4Q9Y696 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CLIC4Q9Y696 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
CLIC4Q9Y696 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
CLIC4Q9Y696 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CLIC4Q9Y696 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC21.85■■□□□ 1.09
CLIC4Q9Y696 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
CLIC4Q9Y696 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
CLIC4Q9Y696 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CLIC4Q9Y696 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC21.85■■□□□ 1.09
CLIC4Q9Y696 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC21.85■■□□□ 1.09
CLIC4Q9Y696 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC21.85■■□□□ 1.09
CLIC4Q9Y696 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC21.85■■□□□ 1.09
CLIC4Q9Y696 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC21.85■■□□□ 1.09
CLIC4Q9Y696 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
CLIC4Q9Y696 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC21.85■■□□□ 1.09
CLIC4Q9Y696 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
CLIC4Q9Y696 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC21.85■■□□□ 1.09
CLIC4Q9Y696 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC21.85■■□□□ 1.09
CLIC4Q9Y696 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC21.85■■□□□ 1.09
CLIC4Q9Y696 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
CLIC4Q9Y696 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC21.85■■□□□ 1.09
CLIC4Q9Y696 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CLIC4Q9Y696 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CLIC4Q9Y696 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC21.84■■□□□ 1.09
CLIC4Q9Y696 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
CLIC4Q9Y696 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
CLIC4Q9Y696 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CLIC4Q9Y696 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC21.84■■□□□ 1.09
CLIC4Q9Y696 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
CLIC4Q9Y696 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CLIC4Q9Y696 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CLIC4Q9Y696 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC21.84■■□□□ 1.09
CLIC4Q9Y696 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CLIC4Q9Y696 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC21.84■■□□□ 1.09
CLIC4Q9Y696 TSPY23P-201ENST00000440136 739 ntBASIC21.84■■□□□ 1.09
CLIC4Q9Y696 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
CLIC4Q9Y696 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CLIC4Q9Y696 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC21.84■■□□□ 1.09
CLIC4Q9Y696 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CLIC4Q9Y696 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC21.84■■□□□ 1.09
CLIC4Q9Y696 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC21.84■■□□□ 1.09
CLIC4Q9Y696 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
CLIC4Q9Y696 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
CLIC4Q9Y696 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
CLIC4Q9Y696 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.09
CLIC4Q9Y696 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.09
CLIC4Q9Y696 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC21.83■■□□□ 1.09
CLIC4Q9Y696 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
CLIC4Q9Y696 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
CLIC4Q9Y696 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
CLIC4Q9Y696 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC21.83■■□□□ 1.09
CLIC4Q9Y696 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
CLIC4Q9Y696 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
CLIC4Q9Y696 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC21.83■■□□□ 1.09
CLIC4Q9Y696 AC239809.2-201ENST00000415381 517 ntBASIC21.83■■□□□ 1.09
CLIC4Q9Y696 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
CLIC4Q9Y696 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC21.83■■□□□ 1.09
CLIC4Q9Y696 AC124016.1-201ENST00000609552 612 ntBASIC21.83■■□□□ 1.09
CLIC4Q9Y696 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC21.83■■□□□ 1.09
CLIC4Q9Y696 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
CLIC4Q9Y696 KRT8P41-201ENST00000533985 1514 ntBASIC21.83■■□□□ 1.09
CLIC4Q9Y696 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC21.83■■□□□ 1.09
CLIC4Q9Y696 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC21.83■■□□□ 1.09
CLIC4Q9Y696 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
CLIC4Q9Y696 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
CLIC4Q9Y696 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.09
CLIC4Q9Y696 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms