Protein–RNA interactions for Protein: Q9NYF3

FAM53C, Protein FAM53C, humanhuman

Predictions only

Length 392 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM53CQ9NYF3 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
FAM53CQ9NYF3 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC19.56■□□□□ 0.72
FAM53CQ9NYF3 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
FAM53CQ9NYF3 PCDHB19P-201ENST00000570871 2371 ntBASIC19.56■□□□□ 0.72
FAM53CQ9NYF3 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
FAM53CQ9NYF3 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
FAM53CQ9NYF3 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
FAM53CQ9NYF3 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC19.56■□□□□ 0.72
FAM53CQ9NYF3 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
FAM53CQ9NYF3 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
FAM53CQ9NYF3 MIR4787-201ENST00000607364 84 ntBASIC19.56■□□□□ 0.72
FAM53CQ9NYF3 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
FAM53CQ9NYF3 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
FAM53CQ9NYF3 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
FAM53CQ9NYF3 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC19.56■□□□□ 0.72
FAM53CQ9NYF3 LINC00602-201ENST00000629776 2065 ntBASIC19.56■□□□□ 0.72
FAM53CQ9NYF3 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
FAM53CQ9NYF3 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
FAM53CQ9NYF3 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
FAM53CQ9NYF3 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
FAM53CQ9NYF3 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
FAM53CQ9NYF3 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC19.56■□□□□ 0.72
FAM53CQ9NYF3 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
FAM53CQ9NYF3 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
FAM53CQ9NYF3 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC19.56■□□□□ 0.72
FAM53CQ9NYF3 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC19.55■□□□□ 0.72
FAM53CQ9NYF3 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC19.55■□□□□ 0.72
FAM53CQ9NYF3 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC19.55■□□□□ 0.72
FAM53CQ9NYF3 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
FAM53CQ9NYF3 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
FAM53CQ9NYF3 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
FAM53CQ9NYF3 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
FAM53CQ9NYF3 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
FAM53CQ9NYF3 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC19.55■□□□□ 0.72
FAM53CQ9NYF3 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
FAM53CQ9NYF3 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
FAM53CQ9NYF3 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
FAM53CQ9NYF3 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
FAM53CQ9NYF3 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC19.55■□□□□ 0.72
FAM53CQ9NYF3 NTF6A-201ENST00000591175 560 ntBASIC19.55■□□□□ 0.72
FAM53CQ9NYF3 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC19.55■□□□□ 0.72
FAM53CQ9NYF3 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC19.55■□□□□ 0.72
FAM53CQ9NYF3 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC19.55■□□□□ 0.72
FAM53CQ9NYF3 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
FAM53CQ9NYF3 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC19.55■□□□□ 0.72
FAM53CQ9NYF3 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
FAM53CQ9NYF3 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
FAM53CQ9NYF3 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
FAM53CQ9NYF3 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC19.55■□□□□ 0.72
FAM53CQ9NYF3 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
FAM53CQ9NYF3 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC19.55■□□□□ 0.72
FAM53CQ9NYF3 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC19.55■□□□□ 0.72
FAM53CQ9NYF3 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
FAM53CQ9NYF3 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
FAM53CQ9NYF3 UBALD1-205ENST00000590891 2641 ntBASIC19.55■□□□□ 0.72
FAM53CQ9NYF3 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC19.54■□□□□ 0.72
FAM53CQ9NYF3 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC19.54■□□□□ 0.72
FAM53CQ9NYF3 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
FAM53CQ9NYF3 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC19.54■□□□□ 0.72
FAM53CQ9NYF3 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
FAM53CQ9NYF3 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC19.54■□□□□ 0.72
FAM53CQ9NYF3 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
FAM53CQ9NYF3 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
FAM53CQ9NYF3 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC19.54■□□□□ 0.72
FAM53CQ9NYF3 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
FAM53CQ9NYF3 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
FAM53CQ9NYF3 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC19.54■□□□□ 0.72
FAM53CQ9NYF3 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC19.54■□□□□ 0.72
FAM53CQ9NYF3 AC087633.2-202ENST00000565166 1439 ntBASIC19.54■□□□□ 0.72
FAM53CQ9NYF3 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
FAM53CQ9NYF3 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC19.54■□□□□ 0.72
FAM53CQ9NYF3 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC19.54■□□□□ 0.72
FAM53CQ9NYF3 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC19.54■□□□□ 0.72
FAM53CQ9NYF3 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
FAM53CQ9NYF3 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
FAM53CQ9NYF3 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
FAM53CQ9NYF3 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
FAM53CQ9NYF3 FLJ38576-201ENST00000623820 2459 ntBASIC19.53■□□□□ 0.72
FAM53CQ9NYF3 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
FAM53CQ9NYF3 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
FAM53CQ9NYF3 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
FAM53CQ9NYF3 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
FAM53CQ9NYF3 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
FAM53CQ9NYF3 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC19.53■□□□□ 0.72
FAM53CQ9NYF3 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
FAM53CQ9NYF3 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC19.53■□□□□ 0.72
FAM53CQ9NYF3 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
FAM53CQ9NYF3 NAA20-201ENST00000310450 920 ntTSL 2 BASIC19.53■□□□□ 0.72
FAM53CQ9NYF3 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
FAM53CQ9NYF3 TSPY13P-201ENST00000338964 914 ntBASIC19.53■□□□□ 0.72
FAM53CQ9NYF3 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
FAM53CQ9NYF3 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
FAM53CQ9NYF3 KRT125P-201ENST00000546827 989 ntBASIC19.53■□□□□ 0.72
FAM53CQ9NYF3 RASSF1-AS1-201ENST00000629828 790 ntBASIC19.53■□□□□ 0.72
FAM53CQ9NYF3 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
FAM53CQ9NYF3 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC19.53■□□□□ 0.72
FAM53CQ9NYF3 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
FAM53CQ9NYF3 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
FAM53CQ9NYF3 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC19.53■□□□□ 0.72
FAM53CQ9NYF3 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC19.53■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms