Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 FCF1P5-201ENST00000406490 482 ntBASIC11.85□□□□□ -0.51
KRTAP3-3Q9BYR6 RBMS1P1-201ENST00000417216 1156 ntBASIC11.85□□□□□ -0.51
KRTAP3-3Q9BYR6 RCC2P2-201ENST00000422174 918 ntBASIC11.85□□□□□ -0.51
KRTAP3-3Q9BYR6 AP002383.1-201ENST00000439405 720 ntBASIC11.85□□□□□ -0.51
KRTAP3-3Q9BYR6 PPP1R2P2-201ENST00000440405 613 ntBASIC11.85□□□□□ -0.51
KRTAP3-3Q9BYR6 AL731661.2-201ENST00000448824 806 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
KRTAP3-3Q9BYR6 AL009048.1-201ENST00000450437 298 ntBASIC11.85□□□□□ -0.51
KRTAP3-3Q9BYR6 MKNK1-207ENST00000465783 464 ntTSL 2 BASIC11.85□□□□□ -0.51
KRTAP3-3Q9BYR6 AF279873.2-201ENST00000468681 744 ntBASIC11.85□□□□□ -0.51
KRTAP3-3Q9BYR6 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
KRTAP3-3Q9BYR6 RPSAP34-201ENST00000476193 736 ntBASIC11.85□□□□□ -0.51
KRTAP3-3Q9BYR6 MGST2-204ENST00000506797 634 ntTSL 2 BASIC11.85□□□□□ -0.51
KRTAP3-3Q9BYR6 AC018709.1-201ENST00000509111 700 ntAPPRIS P1 TSL 3 BASIC11.85□□□□□ -0.51
KRTAP3-3Q9BYR6 LDHAP1-201ENST00000509421 992 ntBASIC11.85□□□□□ -0.51
KRTAP3-3Q9BYR6 SPINK9-202ENST00000511717 604 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
KRTAP3-3Q9BYR6 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
KRTAP3-3Q9BYR6 AC093297.2-202ENST00000514597 659 ntTSL 3 BASIC11.85□□□□□ -0.51
KRTAP3-3Q9BYR6 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC11.85□□□□□ -0.51
KRTAP3-3Q9BYR6 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC11.85□□□□□ -0.51
KRTAP3-3Q9BYR6 AC109635.5-201ENST00000533593 962 ntBASIC11.85□□□□□ -0.51
KRTAP3-3Q9BYR6 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC11.85□□□□□ -0.51
KRTAP3-3Q9BYR6 LINC02296-201ENST00000557070 544 ntTSL 4 BASIC11.85□□□□□ -0.51
KRTAP3-3Q9BYR6 ANP32A-210ENST00000560303 724 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
KRTAP3-3Q9BYR6 AC013652.1-202ENST00000561058 570 ntTSL 4 BASIC11.85□□□□□ -0.51
KRTAP3-3Q9BYR6 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC11.85□□□□□ -0.51
KRTAP3-3Q9BYR6 AC092115.2-201ENST00000562696 575 ntTSL 3 BASIC11.85□□□□□ -0.51
KRTAP3-3Q9BYR6 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC11.85□□□□□ -0.51
KRTAP3-3Q9BYR6 AC110603.1-201ENST00000580645 468 ntTSL 3 BASIC11.85□□□□□ -0.51
KRTAP3-3Q9BYR6 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC11.85□□□□□ -0.51
KRTAP3-3Q9BYR6 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC11.85□□□□□ -0.51
KRTAP3-3Q9BYR6 GMFG-206ENST00000597595 758 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
KRTAP3-3Q9BYR6 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
KRTAP3-3Q9BYR6 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
KRTAP3-3Q9BYR6 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC11.85□□□□□ -0.51
KRTAP3-3Q9BYR6 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
KRTAP3-3Q9BYR6 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
KRTAP3-3Q9BYR6 CNMD-201ENST00000377962 1410 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
KRTAP3-3Q9BYR6 PTPN20-216ENST00000506080 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
KRTAP3-3Q9BYR6 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC11.85□□□□□ -0.51
KRTAP3-3Q9BYR6 SMN2-214ENST00000626847 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
KRTAP3-3Q9BYR6 NRG1-211ENST00000520502 1330 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
KRTAP3-3Q9BYR6 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
KRTAP3-3Q9BYR6 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
KRTAP3-3Q9BYR6 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC11.84□□□□□ -0.51
KRTAP3-3Q9BYR6 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
KRTAP3-3Q9BYR6 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
KRTAP3-3Q9BYR6 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC11.84□□□□□ -0.51
KRTAP3-3Q9BYR6 OR1A1-201ENST00000304094 930 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
KRTAP3-3Q9BYR6 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
KRTAP3-3Q9BYR6 KDSR-201ENST00000326575 1024 ntTSL 2 BASIC11.84□□□□□ -0.51
KRTAP3-3Q9BYR6 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
KRTAP3-3Q9BYR6 ZNF816-ZNF321P-201ENST00000391777 1252 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
KRTAP3-3Q9BYR6 AL359636.2-201ENST00000412262 259 ntTSL 3 BASIC11.84□□□□□ -0.51
KRTAP3-3Q9BYR6 AC096537.2-201ENST00000413707 714 ntBASIC11.84□□□□□ -0.51
KRTAP3-3Q9BYR6 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC11.84□□□□□ -0.51
KRTAP3-3Q9BYR6 DUX4L29-201ENST00000425409 679 ntBASIC11.84□□□□□ -0.51
KRTAP3-3Q9BYR6 LINC00687-201ENST00000427835 558 ntTSL 3 BASIC11.84□□□□□ -0.51
KRTAP3-3Q9BYR6 AL604028.1-201ENST00000430643 598 ntTSL 2 BASIC11.84□□□□□ -0.51
KRTAP3-3Q9BYR6 PIH1D2-202ENST00000431456 1245 ntTSL 5 BASIC11.84□□□□□ -0.51
KRTAP3-3Q9BYR6 BX322234.2-202ENST00000435612 479 ntTSL 3 BASIC11.84□□□□□ -0.51
KRTAP3-3Q9BYR6 RPL3P12-201ENST00000436852 1208 ntBASIC11.84□□□□□ -0.51
KRTAP3-3Q9BYR6 FAM177B-204ENST00000445590 1096 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
KRTAP3-3Q9BYR6 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC11.84□□□□□ -0.51
KRTAP3-3Q9BYR6 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC11.84□□□□□ -0.51
KRTAP3-3Q9BYR6 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC11.84□□□□□ -0.51
KRTAP3-3Q9BYR6 AC093857.1-201ENST00000511603 760 ntTSL 5 BASIC11.84□□□□□ -0.51
KRTAP3-3Q9BYR6 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC11.84□□□□□ -0.51
KRTAP3-3Q9BYR6 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
KRTAP3-3Q9BYR6 AC087664.2-202ENST00000521274 515 ntTSL 3 BASIC11.84□□□□□ -0.51
KRTAP3-3Q9BYR6 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC11.84□□□□□ -0.51
KRTAP3-3Q9BYR6 AC025871.2-201ENST00000522589 511 ntTSL 3 BASIC11.84□□□□□ -0.51
KRTAP3-3Q9BYR6 CASP1P2-201ENST00000526830 1258 ntBASIC11.84□□□□□ -0.51
KRTAP3-3Q9BYR6 OR4A43P-201ENST00000532938 908 ntBASIC11.84□□□□□ -0.51
KRTAP3-3Q9BYR6 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
KRTAP3-3Q9BYR6 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC11.84□□□□□ -0.51
KRTAP3-3Q9BYR6 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC11.84□□□□□ -0.51
KRTAP3-3Q9BYR6 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC11.84□□□□□ -0.51
KRTAP3-3Q9BYR6 AC006272.1-201ENST00000596964 552 ntTSL 4 BASIC11.84□□□□□ -0.51
KRTAP3-3Q9BYR6 AC124312.5-201ENST00000604451 268 ntBASIC11.84□□□□□ -0.51
KRTAP3-3Q9BYR6 AC013468.1-201ENST00000608680 598 ntBASIC11.84□□□□□ -0.51
KRTAP3-3Q9BYR6 AC016590.3-201ENST00000611171 753 ntBASIC11.84□□□□□ -0.51
KRTAP3-3Q9BYR6 AC099654.4-201ENST00000614168 1059 ntBASIC11.84□□□□□ -0.51
KRTAP3-3Q9BYR6 AC015574.1-202ENST00000616588 456 ntTSL 5 BASIC11.84□□□□□ -0.51
KRTAP3-3Q9BYR6 AC010722.1-202ENST00000618284 573 ntTSL 4 BASIC11.84□□□□□ -0.51
KRTAP3-3Q9BYR6 AC244517.9-201ENST00000624102 434 ntTSL 3 BASIC11.84□□□□□ -0.51
KRTAP3-3Q9BYR6 AC004943.1-203ENST00000624370 1074 ntBASIC11.84□□□□□ -0.51
KRTAP3-3Q9BYR6 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
KRTAP3-3Q9BYR6 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
KRTAP3-3Q9BYR6 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC11.84□□□□□ -0.51
KRTAP3-3Q9BYR6 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
KRTAP3-3Q9BYR6 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC11.84□□□□□ -0.51
KRTAP3-3Q9BYR6 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
KRTAP3-3Q9BYR6 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
KRTAP3-3Q9BYR6 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
KRTAP3-3Q9BYR6 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC11.84□□□□□ -0.51
KRTAP3-3Q9BYR6 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC11.84□□□□□ -0.51
KRTAP3-3Q9BYR6 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
KRTAP3-3Q9BYR6 CAB39L-204ENST00000409130 1411 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
KRTAP3-3Q9BYR6 MDH1-201ENST00000233114 1650 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
KRTAP3-3Q9BYR6 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms