Protein–RNA interactions for Protein: Q99500

S1PR3, Sphingosine 1-phosphate receptor 3, humanhuman

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
S1PR3Q99500 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
S1PR3Q99500 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
S1PR3Q99500 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC15.8■□□□□ 0.12
S1PR3Q99500 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
S1PR3Q99500 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
S1PR3Q99500 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
S1PR3Q99500 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
S1PR3Q99500 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC15.8■□□□□ 0.12
S1PR3Q99500 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
S1PR3Q99500 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC15.8■□□□□ 0.12
S1PR3Q99500 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
S1PR3Q99500 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC15.8■□□□□ 0.12
S1PR3Q99500 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC15.8■□□□□ 0.12
S1PR3Q99500 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC15.8■□□□□ 0.12
S1PR3Q99500 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC15.8■□□□□ 0.12
S1PR3Q99500 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
S1PR3Q99500 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
S1PR3Q99500 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
S1PR3Q99500 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC15.8■□□□□ 0.12
S1PR3Q99500 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
S1PR3Q99500 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
S1PR3Q99500 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
S1PR3Q99500 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC15.8■□□□□ 0.12
S1PR3Q99500 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
S1PR3Q99500 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
S1PR3Q99500 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
S1PR3Q99500 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
S1PR3Q99500 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
S1PR3Q99500 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC15.79■□□□□ 0.12
S1PR3Q99500 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
S1PR3Q99500 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
S1PR3Q99500 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
S1PR3Q99500 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC15.79■□□□□ 0.12
S1PR3Q99500 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
S1PR3Q99500 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
S1PR3Q99500 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
S1PR3Q99500 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC15.79■□□□□ 0.12
S1PR3Q99500 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
S1PR3Q99500 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
S1PR3Q99500 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC15.79■□□□□ 0.12
S1PR3Q99500 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
S1PR3Q99500 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
S1PR3Q99500 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC15.79■□□□□ 0.12
S1PR3Q99500 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
S1PR3Q99500 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC15.79■□□□□ 0.12
S1PR3Q99500 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC15.79■□□□□ 0.12
S1PR3Q99500 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
S1PR3Q99500 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
S1PR3Q99500 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
S1PR3Q99500 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
S1PR3Q99500 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
S1PR3Q99500 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
S1PR3Q99500 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC15.79■□□□□ 0.12
S1PR3Q99500 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
S1PR3Q99500 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
S1PR3Q99500 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
S1PR3Q99500 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
S1PR3Q99500 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
S1PR3Q99500 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC15.79■□□□□ 0.12
S1PR3Q99500 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
S1PR3Q99500 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
S1PR3Q99500 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC15.79■□□□□ 0.12
S1PR3Q99500 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
S1PR3Q99500 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC15.78■□□□□ 0.12
S1PR3Q99500 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC15.78■□□□□ 0.12
S1PR3Q99500 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
S1PR3Q99500 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
S1PR3Q99500 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
S1PR3Q99500 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
S1PR3Q99500 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
S1PR3Q99500 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC15.78■□□□□ 0.12
S1PR3Q99500 POU5F1P3-201ENST00000428824 1078 ntBASIC15.78■□□□□ 0.12
S1PR3Q99500 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC15.78■□□□□ 0.12
S1PR3Q99500 FAM201B-201ENST00000458407 597 ntBASIC15.78■□□□□ 0.12
S1PR3Q99500 ADM-205ENST00000528544 586 ntTSL 2 BASIC15.78■□□□□ 0.12
S1PR3Q99500 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC15.78■□□□□ 0.12
S1PR3Q99500 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
S1PR3Q99500 AC004264.1-201ENST00000608354 794 ntBASIC15.78■□□□□ 0.12
S1PR3Q99500 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
S1PR3Q99500 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
S1PR3Q99500 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC15.78■□□□□ 0.12
S1PR3Q99500 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC15.78■□□□□ 0.12
S1PR3Q99500 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC15.78■□□□□ 0.12
S1PR3Q99500 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
S1PR3Q99500 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
S1PR3Q99500 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
S1PR3Q99500 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC15.78■□□□□ 0.12
S1PR3Q99500 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC15.78■□□□□ 0.12
S1PR3Q99500 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
S1PR3Q99500 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
S1PR3Q99500 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
S1PR3Q99500 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC15.77■□□□□ 0.12
S1PR3Q99500 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
S1PR3Q99500 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC15.77■□□□□ 0.12
S1PR3Q99500 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
S1PR3Q99500 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
S1PR3Q99500 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
S1PR3Q99500 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
S1PR3Q99500 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
S1PR3Q99500 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms