Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 TK1-205ENST00000590862 642 ntTSL 3 BASIC16.32■□□□□ 0.2
CSMD1Q96PZ7 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC16.32■□□□□ 0.2
CSMD1Q96PZ7 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CSMD1Q96PZ7 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC16.32■□□□□ 0.2
CSMD1Q96PZ7 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CSMD1Q96PZ7 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
CSMD1Q96PZ7 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CSMD1Q96PZ7 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CSMD1Q96PZ7 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CSMD1Q96PZ7 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
CSMD1Q96PZ7 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC16.32■□□□□ 0.2
CSMD1Q96PZ7 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC16.32■□□□□ 0.2
CSMD1Q96PZ7 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CSMD1Q96PZ7 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
CSMD1Q96PZ7 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC16.32■□□□□ 0.2
CSMD1Q96PZ7 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CSMD1Q96PZ7 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CSMD1Q96PZ7 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CSMD1Q96PZ7 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC16.31■□□□□ 0.2
CSMD1Q96PZ7 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
CSMD1Q96PZ7 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC16.31■□□□□ 0.2
CSMD1Q96PZ7 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC16.31■□□□□ 0.2
CSMD1Q96PZ7 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CSMD1Q96PZ7 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC16.31■□□□□ 0.2
CSMD1Q96PZ7 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CSMD1Q96PZ7 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CSMD1Q96PZ7 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CSMD1Q96PZ7 FABP5-202ENST00000396359 986 ntTSL 5 BASIC16.31■□□□□ 0.2
CSMD1Q96PZ7 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
CSMD1Q96PZ7 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC16.31■□□□□ 0.2
CSMD1Q96PZ7 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CSMD1Q96PZ7 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC16.31■□□□□ 0.2
CSMD1Q96PZ7 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC16.31■□□□□ 0.2
CSMD1Q96PZ7 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CSMD1Q96PZ7 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC16.31■□□□□ 0.2
CSMD1Q96PZ7 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CSMD1Q96PZ7 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CSMD1Q96PZ7 RPL18-209ENST00000550645 463 ntTSL 5 BASIC16.31■□□□□ 0.2
CSMD1Q96PZ7 RPL18-214ENST00000552588 559 ntTSL 3 BASIC16.31■□□□□ 0.2
CSMD1Q96PZ7 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CSMD1Q96PZ7 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC16.3■□□□□ 0.2
CSMD1Q96PZ7 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CSMD1Q96PZ7 AC005104.2-201ENST00000427818 678 ntBASIC16.3■□□□□ 0.2
CSMD1Q96PZ7 BET1L-206ENST00000486280 665 ntTSL 3 BASIC16.3■□□□□ 0.2
CSMD1Q96PZ7 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC16.3■□□□□ 0.2
CSMD1Q96PZ7 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC16.3■□□□□ 0.2
CSMD1Q96PZ7 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC16.3■□□□□ 0.2
CSMD1Q96PZ7 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CSMD1Q96PZ7 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC16.3■□□□□ 0.2
CSMD1Q96PZ7 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CSMD1Q96PZ7 DRAXINP1-201ENST00000437611 948 ntBASIC16.3■□□□□ 0.2
CSMD1Q96PZ7 SAPCD2P3-201ENST00000455031 850 ntBASIC16.3■□□□□ 0.2
CSMD1Q96PZ7 CA15P1-201ENST00000481698 905 ntBASIC16.3■□□□□ 0.2
CSMD1Q96PZ7 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC16.3■□□□□ 0.2
CSMD1Q96PZ7 AC012615.1-201ENST00000565797 1299 ntBASIC16.3■□□□□ 0.2
CSMD1Q96PZ7 MIR3197-201ENST00000582241 73 ntBASIC16.3■□□□□ 0.2
CSMD1Q96PZ7 PIN1-206ENST00000587625 878 ntTSL 2 BASIC16.3■□□□□ 0.2
CSMD1Q96PZ7 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC16.3■□□□□ 0.2
CSMD1Q96PZ7 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CSMD1Q96PZ7 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CSMD1Q96PZ7 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CSMD1Q96PZ7 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
CSMD1Q96PZ7 STAC-204ENST00000457375 1366 ntTSL 2 BASIC16.3■□□□□ 0.2
CSMD1Q96PZ7 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CSMD1Q96PZ7 KRT8P41-201ENST00000533985 1514 ntBASIC16.3■□□□□ 0.2
CSMD1Q96PZ7 HLA-J-202ENST00000469281 1241 ntBASIC16.3■□□□□ 0.2
CSMD1Q96PZ7 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CSMD1Q96PZ7 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC16.3■□□□□ 0.2
CSMD1Q96PZ7 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC16.29■□□□□ 0.2
CSMD1Q96PZ7 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CSMD1Q96PZ7 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CSMD1Q96PZ7 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC16.29■□□□□ 0.2
CSMD1Q96PZ7 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC16.29■□□□□ 0.2
CSMD1Q96PZ7 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC16.29■□□□□ 0.2
CSMD1Q96PZ7 GGCT-205ENST00000409436 954 ntTSL 3 BASIC16.29■□□□□ 0.2
CSMD1Q96PZ7 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC16.29■□□□□ 0.2
CSMD1Q96PZ7 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC16.29■□□□□ 0.2
CSMD1Q96PZ7 KRT8P17-201ENST00000453110 1448 ntBASIC16.29■□□□□ 0.2
CSMD1Q96PZ7 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
CSMD1Q96PZ7 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC16.29■□□□□ 0.2
CSMD1Q96PZ7 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CSMD1Q96PZ7 AKR1C7P-201ENST00000305623 895 ntBASIC16.29■□□□□ 0.2
CSMD1Q96PZ7 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CSMD1Q96PZ7 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC16.29■□□□□ 0.2
CSMD1Q96PZ7 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CSMD1Q96PZ7 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CSMD1Q96PZ7 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
CSMD1Q96PZ7 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC16.29■□□□□ 0.2
CSMD1Q96PZ7 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC16.29■□□□□ 0.2
CSMD1Q96PZ7 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CSMD1Q96PZ7 AC112497.1-201ENST00000624824 639 ntBASIC16.28■□□□□ 0.2
CSMD1Q96PZ7 WDR6-223ENST00000627177 207 ntTSL 2 BASIC16.28■□□□□ 0.2
CSMD1Q96PZ7 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CSMD1Q96PZ7 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
CSMD1Q96PZ7 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC16.28■□□□□ 0.2
CSMD1Q96PZ7 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CSMD1Q96PZ7 RASA4DP-201ENST00000460726 1199 ntBASIC16.28■□□□□ 0.2
CSMD1Q96PZ7 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CSMD1Q96PZ7 PNN-202ENST00000553331 656 ntTSL 3 BASIC16.28■□□□□ 0.2
CSMD1Q96PZ7 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms