Protein–RNA interactions for Protein: Q96PB1

CASD1, N-acetylneuraminate 9-O-acetyltransferase, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASD1Q96PB1 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC20.45■□□□□ 0.86
CASD1Q96PB1 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC20.45■□□□□ 0.86
CASD1Q96PB1 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC20.45■□□□□ 0.86
CASD1Q96PB1 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC20.45■□□□□ 0.86
CASD1Q96PB1 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC20.45■□□□□ 0.86
CASD1Q96PB1 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CASD1Q96PB1 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC20.45■□□□□ 0.86
CASD1Q96PB1 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CASD1Q96PB1 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CASD1Q96PB1 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
CASD1Q96PB1 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CASD1Q96PB1 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CASD1Q96PB1 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
CASD1Q96PB1 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CASD1Q96PB1 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CASD1Q96PB1 GOLGA6L5P-202ENST00000515341 1828 ntBASIC20.44■□□□□ 0.86
CASD1Q96PB1 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CASD1Q96PB1 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CASD1Q96PB1 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CASD1Q96PB1 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CASD1Q96PB1 HBZP1-201ENST00000354915 429 ntBASIC20.44■□□□□ 0.86
CASD1Q96PB1 IPPK-202ENST00000375522 882 ntTSL 3 BASIC20.44■□□□□ 0.86
CASD1Q96PB1 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CASD1Q96PB1 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC20.44■□□□□ 0.86
CASD1Q96PB1 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
CASD1Q96PB1 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
CASD1Q96PB1 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC20.44■□□□□ 0.86
CASD1Q96PB1 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC20.44■□□□□ 0.86
CASD1Q96PB1 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CASD1Q96PB1 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CASD1Q96PB1 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC20.44■□□□□ 0.86
CASD1Q96PB1 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CASD1Q96PB1 AC112907.3-201ENST00000577781 2400 ntBASIC20.44■□□□□ 0.86
CASD1Q96PB1 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CASD1Q96PB1 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC20.44■□□□□ 0.86
CASD1Q96PB1 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CASD1Q96PB1 GAS2L1P1-201ENST00000420145 1480 ntBASIC20.43■□□□□ 0.86
CASD1Q96PB1 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CASD1Q96PB1 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC20.43■□□□□ 0.86
CASD1Q96PB1 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC20.43■□□□□ 0.86
CASD1Q96PB1 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CASD1Q96PB1 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CASD1Q96PB1 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
CASD1Q96PB1 AL023284.2-201ENST00000405850 579 ntBASIC20.43■□□□□ 0.86
CASD1Q96PB1 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
CASD1Q96PB1 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC20.43■□□□□ 0.86
CASD1Q96PB1 RASA4DP-201ENST00000460726 1199 ntBASIC20.43■□□□□ 0.86
CASD1Q96PB1 CNP-204ENST00000472031 1019 ntTSL 2 BASIC20.43■□□□□ 0.86
CASD1Q96PB1 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
CASD1Q96PB1 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC20.43■□□□□ 0.86
CASD1Q96PB1 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
CASD1Q96PB1 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC20.43■□□□□ 0.86
CASD1Q96PB1 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC20.43■□□□□ 0.86
CASD1Q96PB1 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC20.43■□□□□ 0.86
CASD1Q96PB1 CLN6-214ENST00000636314 442 ntTSL 3 BASIC20.43■□□□□ 0.86
CASD1Q96PB1 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CASD1Q96PB1 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
CASD1Q96PB1 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC20.43■□□□□ 0.86
CASD1Q96PB1 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CASD1Q96PB1 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC20.43■□□□□ 0.86
CASD1Q96PB1 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CASD1Q96PB1 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC20.42■□□□□ 0.86
CASD1Q96PB1 AL157384.1-201ENST00000445995 2473 ntBASIC20.42■□□□□ 0.86
CASD1Q96PB1 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC20.42■□□□□ 0.86
CASD1Q96PB1 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CASD1Q96PB1 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC20.42■□□□□ 0.86
CASD1Q96PB1 AC092597.1-201ENST00000487352 616 ntBASIC20.42■□□□□ 0.86
CASD1Q96PB1 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC20.42■□□□□ 0.86
CASD1Q96PB1 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC20.42■□□□□ 0.86
CASD1Q96PB1 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC20.42■□□□□ 0.86
CASD1Q96PB1 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CASD1Q96PB1 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CASD1Q96PB1 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC20.42■□□□□ 0.86
CASD1Q96PB1 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
CASD1Q96PB1 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
CASD1Q96PB1 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
CASD1Q96PB1 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC20.41■□□□□ 0.86
CASD1Q96PB1 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
CASD1Q96PB1 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CASD1Q96PB1 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
CASD1Q96PB1 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CASD1Q96PB1 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CASD1Q96PB1 CLEC4GP1-201ENST00000596555 870 ntBASIC20.41■□□□□ 0.86
CASD1Q96PB1 NDUFV2-AS1-203ENST00000608008 779 ntBASIC20.41■□□□□ 0.86
CASD1Q96PB1 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC20.41■□□□□ 0.86
CASD1Q96PB1 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CASD1Q96PB1 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
CASD1Q96PB1 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
CASD1Q96PB1 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CASD1Q96PB1 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC20.41■□□□□ 0.86
CASD1Q96PB1 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
CASD1Q96PB1 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
CASD1Q96PB1 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CASD1Q96PB1 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CASD1Q96PB1 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
CASD1Q96PB1 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CASD1Q96PB1 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
CASD1Q96PB1 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CASD1Q96PB1 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CASD1Q96PB1 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms