Protein–RNA interactions for Protein: Q96D59

RNF183, Probable E3 ubiquitin-protein ligase RNF183, humanhuman

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF183Q96D59 GLDC-219ENST00000640208 420 ntTSL 2 BASIC14.17□□□□□ -0.14
RNF183Q96D59 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
RNF183Q96D59 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RNF183Q96D59 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
RNF183Q96D59 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
RNF183Q96D59 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RNF183Q96D59 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
RNF183Q96D59 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RNF183Q96D59 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
RNF183Q96D59 AL162377.1-201ENST00000618844 1793 ntBASIC14.17□□□□□ -0.14
RNF183Q96D59 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
RNF183Q96D59 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RNF183Q96D59 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
RNF183Q96D59 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC14.16□□□□□ -0.14
RNF183Q96D59 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
RNF183Q96D59 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
RNF183Q96D59 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
RNF183Q96D59 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RNF183Q96D59 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RNF183Q96D59 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC14.16□□□□□ -0.14
RNF183Q96D59 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
RNF183Q96D59 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
RNF183Q96D59 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC14.16□□□□□ -0.14
RNF183Q96D59 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
RNF183Q96D59 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
RNF183Q96D59 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
RNF183Q96D59 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
RNF183Q96D59 AC004980.1-204ENST00000429707 299 ntBASIC14.16□□□□□ -0.14
RNF183Q96D59 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC14.16□□□□□ -0.14
RNF183Q96D59 NME1-207ENST00000480143 964 ntTSL 2 BASIC14.16□□□□□ -0.14
RNF183Q96D59 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC14.16□□□□□ -0.14
RNF183Q96D59 GRAMD4P8-201ENST00000605465 1115 ntBASIC14.16□□□□□ -0.14
RNF183Q96D59 AP000525.1-201ENST00000608286 694 ntBASIC14.16□□□□□ -0.14
RNF183Q96D59 MIR6786-201ENST00000616843 113 ntBASIC14.16□□□□□ -0.14
RNF183Q96D59 AC097493.4-201ENST00000641197 219 ntBASIC14.16□□□□□ -0.14
RNF183Q96D59 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
RNF183Q96D59 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
RNF183Q96D59 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RNF183Q96D59 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC14.16□□□□□ -0.14
RNF183Q96D59 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC14.16□□□□□ -0.14
RNF183Q96D59 AC079598.2-202ENST00000546624 1451 ntBASIC14.16□□□□□ -0.14
RNF183Q96D59 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC14.16□□□□□ -0.14
RNF183Q96D59 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
RNF183Q96D59 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
RNF183Q96D59 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC14.16□□□□□ -0.14
RNF183Q96D59 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
RNF183Q96D59 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC14.16□□□□□ -0.14
RNF183Q96D59 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
RNF183Q96D59 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
RNF183Q96D59 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RNF183Q96D59 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
RNF183Q96D59 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
RNF183Q96D59 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC14.15□□□□□ -0.14
RNF183Q96D59 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RNF183Q96D59 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
RNF183Q96D59 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
RNF183Q96D59 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RNF183Q96D59 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RNF183Q96D59 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC14.15□□□□□ -0.14
RNF183Q96D59 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RNF183Q96D59 AC011270.2-201ENST00000624293 2550 ntBASIC14.15□□□□□ -0.14
RNF183Q96D59 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC14.15□□□□□ -0.14
RNF183Q96D59 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC14.15□□□□□ -0.14
RNF183Q96D59 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
RNF183Q96D59 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RNF183Q96D59 AC009237.14-201ENST00000609975 1594 ntBASIC14.15□□□□□ -0.14
RNF183Q96D59 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
RNF183Q96D59 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RNF183Q96D59 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RNF183Q96D59 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RNF183Q96D59 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
RNF183Q96D59 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC14.15□□□□□ -0.14
RNF183Q96D59 MIR1238-201ENST00000408483 83 ntBASIC14.15□□□□□ -0.14
RNF183Q96D59 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
RNF183Q96D59 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RNF183Q96D59 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC14.15□□□□□ -0.14
RNF183Q96D59 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
RNF183Q96D59 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
RNF183Q96D59 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC14.15□□□□□ -0.14
RNF183Q96D59 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC14.15□□□□□ -0.14
RNF183Q96D59 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC14.15□□□□□ -0.14
RNF183Q96D59 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC14.15□□□□□ -0.14
RNF183Q96D59 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC14.15□□□□□ -0.14
RNF183Q96D59 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC14.15□□□□□ -0.14
RNF183Q96D59 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
RNF183Q96D59 ABBA01031674.1-201ENST00000635145 728 ntBASIC14.15□□□□□ -0.14
RNF183Q96D59 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RNF183Q96D59 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
RNF183Q96D59 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RNF183Q96D59 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
RNF183Q96D59 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
RNF183Q96D59 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC14.15□□□□□ -0.14
RNF183Q96D59 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC14.15□□□□□ -0.14
RNF183Q96D59 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RNF183Q96D59 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC14.15□□□□□ -0.14
RNF183Q96D59 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RNF183Q96D59 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC14.15□□□□□ -0.14
RNF183Q96D59 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
RNF183Q96D59 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RNF183Q96D59 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms