Protein–RNA interactions for Protein: Q96AJ9

VTI1A, Vesicle transport through interaction with t-SNAREs homolog 1A, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1AQ96AJ9 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC21.62■■□□□ 1.05
VTI1AQ96AJ9 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC21.62■■□□□ 1.05
VTI1AQ96AJ9 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC21.62■■□□□ 1.05
VTI1AQ96AJ9 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC21.62■■□□□ 1.05
VTI1AQ96AJ9 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
VTI1AQ96AJ9 AL023973.1-201ENST00000624619 620 ntBASIC21.62■■□□□ 1.05
VTI1AQ96AJ9 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
VTI1AQ96AJ9 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
VTI1AQ96AJ9 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC21.62■■□□□ 1.05
VTI1AQ96AJ9 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC21.62■■□□□ 1.05
VTI1AQ96AJ9 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
VTI1AQ96AJ9 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
VTI1AQ96AJ9 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC21.62■■□□□ 1.05
VTI1AQ96AJ9 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
VTI1AQ96AJ9 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
VTI1AQ96AJ9 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC21.62■■□□□ 1.05
VTI1AQ96AJ9 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
VTI1AQ96AJ9 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC21.61■■□□□ 1.05
VTI1AQ96AJ9 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
VTI1AQ96AJ9 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC21.61■■□□□ 1.05
VTI1AQ96AJ9 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
VTI1AQ96AJ9 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
VTI1AQ96AJ9 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC21.61■■□□□ 1.05
VTI1AQ96AJ9 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
VTI1AQ96AJ9 TPM4P1-201ENST00000436100 807 ntBASIC21.61■■□□□ 1.05
VTI1AQ96AJ9 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC21.61■■□□□ 1.05
VTI1AQ96AJ9 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC21.61■■□□□ 1.05
VTI1AQ96AJ9 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC21.61■■□□□ 1.05
VTI1AQ96AJ9 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC21.61■■□□□ 1.05
VTI1AQ96AJ9 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
VTI1AQ96AJ9 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC21.61■■□□□ 1.05
VTI1AQ96AJ9 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
VTI1AQ96AJ9 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
VTI1AQ96AJ9 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
VTI1AQ96AJ9 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
VTI1AQ96AJ9 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
VTI1AQ96AJ9 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
VTI1AQ96AJ9 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
VTI1AQ96AJ9 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
VTI1AQ96AJ9 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC21.6■■□□□ 1.05
VTI1AQ96AJ9 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
VTI1AQ96AJ9 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC21.6■■□□□ 1.05
VTI1AQ96AJ9 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC21.6■■□□□ 1.05
VTI1AQ96AJ9 AL671277.2-201ENST00000458060 996 ntBASIC21.6■■□□□ 1.05
VTI1AQ96AJ9 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC21.6■■□□□ 1.05
VTI1AQ96AJ9 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC21.6■■□□□ 1.05
VTI1AQ96AJ9 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC21.6■■□□□ 1.05
VTI1AQ96AJ9 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC21.6■■□□□ 1.05
VTI1AQ96AJ9 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC21.6■■□□□ 1.05
VTI1AQ96AJ9 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC21.6■■□□□ 1.05
VTI1AQ96AJ9 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
VTI1AQ96AJ9 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
VTI1AQ96AJ9 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
VTI1AQ96AJ9 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC21.59■■□□□ 1.05
VTI1AQ96AJ9 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
VTI1AQ96AJ9 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
VTI1AQ96AJ9 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
VTI1AQ96AJ9 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
VTI1AQ96AJ9 IPPK-202ENST00000375522 882 ntTSL 3 BASIC21.59■■□□□ 1.05
VTI1AQ96AJ9 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC21.59■■□□□ 1.05
VTI1AQ96AJ9 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
VTI1AQ96AJ9 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC21.59■■□□□ 1.05
VTI1AQ96AJ9 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC21.59■■□□□ 1.05
VTI1AQ96AJ9 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
VTI1AQ96AJ9 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC21.59■■□□□ 1.05
VTI1AQ96AJ9 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC21.59■■□□□ 1.05
VTI1AQ96AJ9 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
VTI1AQ96AJ9 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
VTI1AQ96AJ9 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC21.59■■□□□ 1.05
VTI1AQ96AJ9 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
VTI1AQ96AJ9 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC21.59■■□□□ 1.05
VTI1AQ96AJ9 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
VTI1AQ96AJ9 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
VTI1AQ96AJ9 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
VTI1AQ96AJ9 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
VTI1AQ96AJ9 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
VTI1AQ96AJ9 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
VTI1AQ96AJ9 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC21.59■■□□□ 1.05
VTI1AQ96AJ9 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
VTI1AQ96AJ9 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC21.59■■□□□ 1.05
VTI1AQ96AJ9 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC21.59■■□□□ 1.05
VTI1AQ96AJ9 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
VTI1AQ96AJ9 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
VTI1AQ96AJ9 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
VTI1AQ96AJ9 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC21.58■■□□□ 1.05
VTI1AQ96AJ9 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.05
VTI1AQ96AJ9 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
VTI1AQ96AJ9 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC21.58■■□□□ 1.05
VTI1AQ96AJ9 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.05
VTI1AQ96AJ9 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC21.58■■□□□ 1.05
VTI1AQ96AJ9 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC21.58■■□□□ 1.05
VTI1AQ96AJ9 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
VTI1AQ96AJ9 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC21.58■■□□□ 1.05
VTI1AQ96AJ9 AL441883.1-201ENST00000566170 1045 ntBASIC21.58■■□□□ 1.05
VTI1AQ96AJ9 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC21.58■■□□□ 1.05
VTI1AQ96AJ9 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC21.58■■□□□ 1.05
VTI1AQ96AJ9 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC21.58■■□□□ 1.05
VTI1AQ96AJ9 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC21.58■■□□□ 1.05
VTI1AQ96AJ9 LINC01465-201ENST00000408887 1940 ntBASIC21.58■■□□□ 1.04
VTI1AQ96AJ9 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms