Protein–RNA interactions for Protein: Q969H4

CNKSR1, Connector enhancer of kinase suppressor of ras 1, humanhuman

Predictions only

Length 720 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1Q969H4 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
CNKSR1Q969H4 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
CNKSR1Q969H4 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC23.47■■□□□ 1.35
CNKSR1Q969H4 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC23.47■■□□□ 1.35
CNKSR1Q969H4 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC23.47■■□□□ 1.35
CNKSR1Q969H4 AC104692.2-201ENST00000603054 253 ntBASIC23.47■■□□□ 1.35
CNKSR1Q969H4 AL121772.3-201ENST00000610840 674 ntBASIC23.47■■□□□ 1.35
CNKSR1Q969H4 AL031008.1-201ENST00000619963 541 ntBASIC23.47■■□□□ 1.35
CNKSR1Q969H4 AC079602.3-201ENST00000623931 403 ntBASIC23.47■■□□□ 1.35
CNKSR1Q969H4 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC23.47■■□□□ 1.35
CNKSR1Q969H4 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC23.47■■□□□ 1.35
CNKSR1Q969H4 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC23.47■■□□□ 1.35
CNKSR1Q969H4 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC23.47■■□□□ 1.35
CNKSR1Q969H4 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
CNKSR1Q969H4 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC23.47■■□□□ 1.35
CNKSR1Q969H4 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC23.47■■□□□ 1.35
CNKSR1Q969H4 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC23.47■■□□□ 1.35
CNKSR1Q969H4 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC23.47■■□□□ 1.35
CNKSR1Q969H4 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC23.47■■□□□ 1.35
CNKSR1Q969H4 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC23.47■■□□□ 1.35
CNKSR1Q969H4 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
CNKSR1Q969H4 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
CNKSR1Q969H4 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
CNKSR1Q969H4 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
CNKSR1Q969H4 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
CNKSR1Q969H4 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC23.46■■□□□ 1.35
CNKSR1Q969H4 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC23.46■■□□□ 1.35
CNKSR1Q969H4 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC23.46■■□□□ 1.35
CNKSR1Q969H4 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC23.46■■□□□ 1.35
CNKSR1Q969H4 AC036111.1-201ENST00000533973 1582 ntBASIC23.46■■□□□ 1.35
CNKSR1Q969H4 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
CNKSR1Q969H4 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
CNKSR1Q969H4 AL160237.2-201ENST00000556165 472 ntBASIC23.46■■□□□ 1.35
CNKSR1Q969H4 AL732292.2-201ENST00000609649 430 ntBASIC23.46■■□□□ 1.35
CNKSR1Q969H4 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC23.46■■□□□ 1.35
CNKSR1Q969H4 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC23.45■■□□□ 1.35
CNKSR1Q969H4 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC23.45■■□□□ 1.35
CNKSR1Q969H4 AC104417.2-201ENST00000562989 1793 ntBASIC23.45■■□□□ 1.34
CNKSR1Q969H4 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC23.45■■□□□ 1.34
CNKSR1Q969H4 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
CNKSR1Q969H4 MIR662-201ENST00000384847 95 ntBASIC23.45■■□□□ 1.34
CNKSR1Q969H4 AL023284.2-201ENST00000405850 579 ntBASIC23.45■■□□□ 1.34
CNKSR1Q969H4 TSPY22P-201ENST00000427496 604 ntBASIC23.45■■□□□ 1.34
CNKSR1Q969H4 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC23.45■■□□□ 1.34
CNKSR1Q969H4 DRAXINP1-201ENST00000437611 948 ntBASIC23.45■■□□□ 1.34
CNKSR1Q969H4 SEC1P-202ENST00000473944 940 ntBASIC23.45■■□□□ 1.34
CNKSR1Q969H4 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
CNKSR1Q969H4 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC23.45■■□□□ 1.34
CNKSR1Q969H4 AC091304.2-201ENST00000564639 760 ntBASIC23.45■■□□□ 1.34
CNKSR1Q969H4 GXYLT1P4-201ENST00000613576 1192 ntBASIC23.45■■□□□ 1.34
CNKSR1Q969H4 AC023511.2-201ENST00000618803 211 ntBASIC23.45■■□□□ 1.34
CNKSR1Q969H4 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
CNKSR1Q969H4 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
CNKSR1Q969H4 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC23.45■■□□□ 1.34
CNKSR1Q969H4 AC020907.5-201ENST00000624372 1936 ntBASIC23.45■■□□□ 1.34
CNKSR1Q969H4 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
CNKSR1Q969H4 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
CNKSR1Q969H4 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC23.44■■□□□ 1.34
CNKSR1Q969H4 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
CNKSR1Q969H4 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC23.44■■□□□ 1.34
CNKSR1Q969H4 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
CNKSR1Q969H4 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC23.44■■□□□ 1.34
CNKSR1Q969H4 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC23.44■■□□□ 1.34
CNKSR1Q969H4 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC23.44■■□□□ 1.34
CNKSR1Q969H4 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC23.44■■□□□ 1.34
CNKSR1Q969H4 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
CNKSR1Q969H4 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC23.44■■□□□ 1.34
CNKSR1Q969H4 AL022342.1-201ENST00000400363 863 ntBASIC23.44■■□□□ 1.34
CNKSR1Q969H4 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC23.44■■□□□ 1.34
CNKSR1Q969H4 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC23.44■■□□□ 1.34
CNKSR1Q969H4 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
CNKSR1Q969H4 LINC01711-201ENST00000598340 967 ntBASIC23.44■■□□□ 1.34
CNKSR1Q969H4 AC006538.3-201ENST00000612495 578 ntBASIC23.44■■□□□ 1.34
CNKSR1Q969H4 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC23.44■■□□□ 1.34
CNKSR1Q969H4 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC23.44■■□□□ 1.34
CNKSR1Q969H4 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
CNKSR1Q969H4 AL691432.2-201ENST00000607222 2038 ntBASIC23.43■■□□□ 1.34
CNKSR1Q969H4 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
CNKSR1Q969H4 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
CNKSR1Q969H4 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC23.43■■□□□ 1.34
CNKSR1Q969H4 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC23.43■■□□□ 1.34
CNKSR1Q969H4 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC23.43■■□□□ 1.34
CNKSR1Q969H4 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC23.43■■□□□ 1.34
CNKSR1Q969H4 PNN-202ENST00000553331 656 ntTSL 3 BASIC23.43■■□□□ 1.34
CNKSR1Q969H4 CALM1-205ENST00000553542 877 ntTSL 5 BASIC23.43■■□□□ 1.34
CNKSR1Q969H4 TPSP2-201ENST00000561760 610 ntBASIC23.43■■□□□ 1.34
CNKSR1Q969H4 MIR3180-5-201ENST00000583743 153 ntBASIC23.43■■□□□ 1.34
CNKSR1Q969H4 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC23.43■■□□□ 1.34
CNKSR1Q969H4 AL136038.4-201ENST00000603606 1261 ntBASIC23.43■■□□□ 1.34
CNKSR1Q969H4 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC23.43■■□□□ 1.34
CNKSR1Q969H4 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC23.43■■□□□ 1.34
CNKSR1Q969H4 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC23.43■■□□□ 1.34
CNKSR1Q969H4 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC23.43■■□□□ 1.34
CNKSR1Q969H4 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
CNKSR1Q969H4 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC23.43■■□□□ 1.34
CNKSR1Q969H4 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC23.43■■□□□ 1.34
CNKSR1Q969H4 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC23.43■■□□□ 1.34
CNKSR1Q969H4 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC23.43■■□□□ 1.34
CNKSR1Q969H4 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC23.43■■□□□ 1.34
CNKSR1Q969H4 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC23.42■■□□□ 1.34
Retrieved 100 of 98,524 protein–RNA pairs in 10.6 ms