Protein–RNA interactions for Protein: Q8TBN0

RAB3IL1, Guanine nucleotide exchange factor for Rab-3A, humanhuman

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IL1Q8TBN0 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC19.09■□□□□ 0.65
RAB3IL1Q8TBN0 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
RAB3IL1Q8TBN0 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC19.09■□□□□ 0.65
RAB3IL1Q8TBN0 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
RAB3IL1Q8TBN0 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
RAB3IL1Q8TBN0 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RAB3IL1Q8TBN0 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC19.09■□□□□ 0.65
RAB3IL1Q8TBN0 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC19.09■□□□□ 0.65
RAB3IL1Q8TBN0 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RAB3IL1Q8TBN0 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
RAB3IL1Q8TBN0 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
RAB3IL1Q8TBN0 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
RAB3IL1Q8TBN0 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC19.09■□□□□ 0.65
RAB3IL1Q8TBN0 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RAB3IL1Q8TBN0 EFTUD1P1-204ENST00000560401 1798 ntBASIC19.09■□□□□ 0.65
RAB3IL1Q8TBN0 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
RAB3IL1Q8TBN0 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RAB3IL1Q8TBN0 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
RAB3IL1Q8TBN0 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.65
RAB3IL1Q8TBN0 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
RAB3IL1Q8TBN0 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
RAB3IL1Q8TBN0 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
RAB3IL1Q8TBN0 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.65
RAB3IL1Q8TBN0 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
RAB3IL1Q8TBN0 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
RAB3IL1Q8TBN0 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
RAB3IL1Q8TBN0 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC19.08■□□□□ 0.64
RAB3IL1Q8TBN0 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
RAB3IL1Q8TBN0 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC19.08■□□□□ 0.64
RAB3IL1Q8TBN0 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
RAB3IL1Q8TBN0 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
RAB3IL1Q8TBN0 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC19.08■□□□□ 0.64
RAB3IL1Q8TBN0 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC19.08■□□□□ 0.64
RAB3IL1Q8TBN0 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
RAB3IL1Q8TBN0 AR-207ENST00000612010 3896 ntTSL 5 BASIC19.08■□□□□ 0.64
RAB3IL1Q8TBN0 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC19.08■□□□□ 0.64
RAB3IL1Q8TBN0 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC19.08■□□□□ 0.64
RAB3IL1Q8TBN0 FP475955.4-201ENST00000623131 1990 ntBASIC19.08■□□□□ 0.64
RAB3IL1Q8TBN0 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
RAB3IL1Q8TBN0 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
RAB3IL1Q8TBN0 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
RAB3IL1Q8TBN0 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC19.07■□□□□ 0.64
RAB3IL1Q8TBN0 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RAB3IL1Q8TBN0 AL354751.1-201ENST00000412768 1863 ntBASIC19.07■□□□□ 0.64
RAB3IL1Q8TBN0 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RAB3IL1Q8TBN0 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
RAB3IL1Q8TBN0 TFP1-202ENST00000475455 1573 ntBASIC19.07■□□□□ 0.64
RAB3IL1Q8TBN0 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RAB3IL1Q8TBN0 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
RAB3IL1Q8TBN0 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC19.07■□□□□ 0.64
RAB3IL1Q8TBN0 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RAB3IL1Q8TBN0 AL512353.2-201ENST00000448759 1962 ntBASIC19.07■□□□□ 0.64
RAB3IL1Q8TBN0 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RAB3IL1Q8TBN0 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
RAB3IL1Q8TBN0 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
RAB3IL1Q8TBN0 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
RAB3IL1Q8TBN0 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC19.07■□□□□ 0.64
RAB3IL1Q8TBN0 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
RAB3IL1Q8TBN0 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC19.07■□□□□ 0.64
RAB3IL1Q8TBN0 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC19.07■□□□□ 0.64
RAB3IL1Q8TBN0 AL589743.5-201ENST00000616611 1050 ntBASIC19.07■□□□□ 0.64
RAB3IL1Q8TBN0 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC19.07■□□□□ 0.64
RAB3IL1Q8TBN0 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RAB3IL1Q8TBN0 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
RAB3IL1Q8TBN0 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
RAB3IL1Q8TBN0 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC19.07■□□□□ 0.64
RAB3IL1Q8TBN0 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
RAB3IL1Q8TBN0 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RAB3IL1Q8TBN0 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC19.06■□□□□ 0.64
RAB3IL1Q8TBN0 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RAB3IL1Q8TBN0 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
RAB3IL1Q8TBN0 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
RAB3IL1Q8TBN0 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RAB3IL1Q8TBN0 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
RAB3IL1Q8TBN0 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RAB3IL1Q8TBN0 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC19.06■□□□□ 0.64
RAB3IL1Q8TBN0 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RAB3IL1Q8TBN0 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC19.06■□□□□ 0.64
RAB3IL1Q8TBN0 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
RAB3IL1Q8TBN0 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC19.06■□□□□ 0.64
RAB3IL1Q8TBN0 CALM3-202ENST00000391918 702 ntTSL 2 BASIC19.06■□□□□ 0.64
RAB3IL1Q8TBN0 KRT18P5-201ENST00000436075 1291 ntBASIC19.06■□□□□ 0.64
RAB3IL1Q8TBN0 HES2-205ENST00000487437 968 ntTSL 3 BASIC19.06■□□□□ 0.64
RAB3IL1Q8TBN0 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RAB3IL1Q8TBN0 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC19.06■□□□□ 0.64
RAB3IL1Q8TBN0 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
RAB3IL1Q8TBN0 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC19.06■□□□□ 0.64
RAB3IL1Q8TBN0 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
RAB3IL1Q8TBN0 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
RAB3IL1Q8TBN0 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC19.06■□□□□ 0.64
RAB3IL1Q8TBN0 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RAB3IL1Q8TBN0 IRX1P1-201ENST00000438849 1838 ntBASIC19.06■□□□□ 0.64
RAB3IL1Q8TBN0 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
RAB3IL1Q8TBN0 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RAB3IL1Q8TBN0 AC068338.2-201ENST00000563278 1430 ntBASIC19.06■□□□□ 0.64
RAB3IL1Q8TBN0 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
RAB3IL1Q8TBN0 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
RAB3IL1Q8TBN0 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RAB3IL1Q8TBN0 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RAB3IL1Q8TBN0 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC19.06■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms