Protein–RNA interactions for Protein: Q8N9I9

DTX3, Probable E3 ubiquitin-protein ligase DTX3, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DTX3Q8N9I9 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC16.92■□□□□ 0.3
DTX3Q8N9I9 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
DTX3Q8N9I9 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
DTX3Q8N9I9 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
DTX3Q8N9I9 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
DTX3Q8N9I9 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
DTX3Q8N9I9 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
DTX3Q8N9I9 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC16.91■□□□□ 0.3
DTX3Q8N9I9 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC16.91■□□□□ 0.3
DTX3Q8N9I9 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC16.91■□□□□ 0.3
DTX3Q8N9I9 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC16.91■□□□□ 0.3
DTX3Q8N9I9 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
DTX3Q8N9I9 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC16.91■□□□□ 0.3
DTX3Q8N9I9 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
DTX3Q8N9I9 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC16.91■□□□□ 0.3
DTX3Q8N9I9 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
DTX3Q8N9I9 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
DTX3Q8N9I9 KRT8P17-201ENST00000453110 1448 ntBASIC16.91■□□□□ 0.3
DTX3Q8N9I9 RBM17P2-201ENST00000616397 1405 ntBASIC16.91■□□□□ 0.3
DTX3Q8N9I9 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC16.91■□□□□ 0.3
DTX3Q8N9I9 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC16.91■□□□□ 0.3
DTX3Q8N9I9 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
DTX3Q8N9I9 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
DTX3Q8N9I9 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC16.91■□□□□ 0.3
DTX3Q8N9I9 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC16.91■□□□□ 0.3
DTX3Q8N9I9 TK2-208ENST00000545043 1120 ntTSL 2 BASIC16.91■□□□□ 0.3
DTX3Q8N9I9 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC16.91■□□□□ 0.3
DTX3Q8N9I9 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
DTX3Q8N9I9 AC073111.5-205ENST00000641717 521 ntBASIC16.91■□□□□ 0.3
DTX3Q8N9I9 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC16.91■□□□□ 0.3
DTX3Q8N9I9 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
DTX3Q8N9I9 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
DTX3Q8N9I9 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
DTX3Q8N9I9 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC16.91■□□□□ 0.3
DTX3Q8N9I9 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
DTX3Q8N9I9 AC068880.1-201ENST00000507289 2297 ntBASIC16.91■□□□□ 0.3
DTX3Q8N9I9 PTBP1P-201ENST00000554374 1601 ntBASIC16.91■□□□□ 0.3
DTX3Q8N9I9 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
DTX3Q8N9I9 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC16.91■□□□□ 0.3
DTX3Q8N9I9 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
DTX3Q8N9I9 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
DTX3Q8N9I9 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
DTX3Q8N9I9 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
DTX3Q8N9I9 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
DTX3Q8N9I9 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
DTX3Q8N9I9 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
DTX3Q8N9I9 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
DTX3Q8N9I9 PKD1P1-201ENST00000458669 6805 ntBASIC16.91■□□□□ 0.3
DTX3Q8N9I9 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
DTX3Q8N9I9 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
DTX3Q8N9I9 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
DTX3Q8N9I9 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
DTX3Q8N9I9 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
DTX3Q8N9I9 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC16.9■□□□□ 0.3
DTX3Q8N9I9 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
DTX3Q8N9I9 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
DTX3Q8N9I9 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
DTX3Q8N9I9 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
DTX3Q8N9I9 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
DTX3Q8N9I9 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC16.9■□□□□ 0.3
DTX3Q8N9I9 CD276-201ENST00000318424 2738 ntTSL 5 BASIC16.9■□□□□ 0.3
DTX3Q8N9I9 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
DTX3Q8N9I9 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC16.9■□□□□ 0.3
DTX3Q8N9I9 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC16.9■□□□□ 0.3
DTX3Q8N9I9 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC16.9■□□□□ 0.3
DTX3Q8N9I9 AP001160.3-201ENST00000601484 763 ntBASIC16.9■□□□□ 0.3
DTX3Q8N9I9 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC16.9■□□□□ 0.3
DTX3Q8N9I9 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
DTX3Q8N9I9 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
DTX3Q8N9I9 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC16.9■□□□□ 0.3
DTX3Q8N9I9 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC16.9■□□□□ 0.3
DTX3Q8N9I9 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
DTX3Q8N9I9 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
DTX3Q8N9I9 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
DTX3Q8N9I9 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
DTX3Q8N9I9 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
DTX3Q8N9I9 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
DTX3Q8N9I9 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
DTX3Q8N9I9 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
DTX3Q8N9I9 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
DTX3Q8N9I9 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
DTX3Q8N9I9 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
DTX3Q8N9I9 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
DTX3Q8N9I9 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
DTX3Q8N9I9 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
DTX3Q8N9I9 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
DTX3Q8N9I9 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC16.89■□□□□ 0.29
DTX3Q8N9I9 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC16.89■□□□□ 0.29
DTX3Q8N9I9 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
DTX3Q8N9I9 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
DTX3Q8N9I9 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
DTX3Q8N9I9 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
DTX3Q8N9I9 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
DTX3Q8N9I9 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC16.89■□□□□ 0.29
DTX3Q8N9I9 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
DTX3Q8N9I9 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
DTX3Q8N9I9 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC16.88■□□□□ 0.29
DTX3Q8N9I9 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
DTX3Q8N9I9 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
DTX3Q8N9I9 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC16.88■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms