Protein–RNA interactions for Protein: Q8N609

TRAM1L1, Translocating chain-associated membrane protein 1-like 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1L1Q8N609 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC18.95■□□□□ 0.62
TRAM1L1Q8N609 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TRAM1L1Q8N609 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC18.95■□□□□ 0.62
TRAM1L1Q8N609 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC18.95■□□□□ 0.62
TRAM1L1Q8N609 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
TRAM1L1Q8N609 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC18.95■□□□□ 0.62
TRAM1L1Q8N609 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TRAM1L1Q8N609 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
TRAM1L1Q8N609 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TRAM1L1Q8N609 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TRAM1L1Q8N609 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
TRAM1L1Q8N609 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC18.94■□□□□ 0.62
TRAM1L1Q8N609 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC18.94■□□□□ 0.62
TRAM1L1Q8N609 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC18.94■□□□□ 0.62
TRAM1L1Q8N609 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
TRAM1L1Q8N609 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
TRAM1L1Q8N609 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC18.94■□□□□ 0.62
TRAM1L1Q8N609 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
TRAM1L1Q8N609 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
TRAM1L1Q8N609 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC18.94■□□□□ 0.62
TRAM1L1Q8N609 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC18.94■□□□□ 0.62
TRAM1L1Q8N609 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC18.94■□□□□ 0.62
TRAM1L1Q8N609 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
TRAM1L1Q8N609 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC18.94■□□□□ 0.62
TRAM1L1Q8N609 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TRAM1L1Q8N609 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
TRAM1L1Q8N609 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
TRAM1L1Q8N609 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
TRAM1L1Q8N609 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
TRAM1L1Q8N609 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TRAM1L1Q8N609 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC18.93■□□□□ 0.62
TRAM1L1Q8N609 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRAM1L1Q8N609 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRAM1L1Q8N609 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRAM1L1Q8N609 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
TRAM1L1Q8N609 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
TRAM1L1Q8N609 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRAM1L1Q8N609 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRAM1L1Q8N609 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRAM1L1Q8N609 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC18.93■□□□□ 0.62
TRAM1L1Q8N609 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRAM1L1Q8N609 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRAM1L1Q8N609 PRR31-201ENST00000371629 978 ntTSL 2 BASIC18.93■□□□□ 0.62
TRAM1L1Q8N609 AC087499.1-201ENST00000418141 1075 ntBASIC18.93■□□□□ 0.62
TRAM1L1Q8N609 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC18.93■□□□□ 0.62
TRAM1L1Q8N609 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC18.93■□□□□ 0.62
TRAM1L1Q8N609 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC18.93■□□□□ 0.62
TRAM1L1Q8N609 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC18.93■□□□□ 0.62
TRAM1L1Q8N609 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRAM1L1Q8N609 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
TRAM1L1Q8N609 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRAM1L1Q8N609 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
TRAM1L1Q8N609 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC18.93■□□□□ 0.62
TRAM1L1Q8N609 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC18.93■□□□□ 0.62
TRAM1L1Q8N609 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRAM1L1Q8N609 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
TRAM1L1Q8N609 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC18.93■□□□□ 0.62
TRAM1L1Q8N609 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
TRAM1L1Q8N609 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TRAM1L1Q8N609 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC18.92■□□□□ 0.62
TRAM1L1Q8N609 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
TRAM1L1Q8N609 KRT8P9-201ENST00000558927 1449 ntBASIC18.92■□□□□ 0.62
TRAM1L1Q8N609 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
TRAM1L1Q8N609 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
TRAM1L1Q8N609 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TRAM1L1Q8N609 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
TRAM1L1Q8N609 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
TRAM1L1Q8N609 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
TRAM1L1Q8N609 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
TRAM1L1Q8N609 RPS20-210ENST00000523936 899 ntTSL 2 BASIC18.92■□□□□ 0.62
TRAM1L1Q8N609 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC18.92■□□□□ 0.62
TRAM1L1Q8N609 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TRAM1L1Q8N609 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC18.92■□□□□ 0.62
TRAM1L1Q8N609 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC18.92■□□□□ 0.62
TRAM1L1Q8N609 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC18.92■□□□□ 0.62
TRAM1L1Q8N609 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TRAM1L1Q8N609 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC18.92■□□□□ 0.62
TRAM1L1Q8N609 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRAM1L1Q8N609 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRAM1L1Q8N609 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRAM1L1Q8N609 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
TRAM1L1Q8N609 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRAM1L1Q8N609 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
TRAM1L1Q8N609 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRAM1L1Q8N609 CA15P1-201ENST00000481698 905 ntBASIC18.91■□□□□ 0.62
TRAM1L1Q8N609 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC18.91■□□□□ 0.62
TRAM1L1Q8N609 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC18.91■□□□□ 0.62
TRAM1L1Q8N609 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
TRAM1L1Q8N609 NAPSB-206ENST00000562112 1266 ntBASIC18.91■□□□□ 0.62
TRAM1L1Q8N609 C2orf69P3-201ENST00000565542 1120 ntBASIC18.91■□□□□ 0.62
TRAM1L1Q8N609 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC18.91■□□□□ 0.62
TRAM1L1Q8N609 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC18.91■□□□□ 0.62
TRAM1L1Q8N609 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC18.91■□□□□ 0.62
TRAM1L1Q8N609 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
TRAM1L1Q8N609 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC18.91■□□□□ 0.62
TRAM1L1Q8N609 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC18.91■□□□□ 0.62
TRAM1L1Q8N609 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRAM1L1Q8N609 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC18.91■□□□□ 0.62
TRAM1L1Q8N609 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC18.91■□□□□ 0.62
TRAM1L1Q8N609 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms