Protein–RNA interactions for Protein: Q8N4M1

SLC44A3, Choline transporter-like protein 3, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A3Q8N4M1 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC19.61■□□□□ 0.73
SLC44A3Q8N4M1 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC19.61■□□□□ 0.73
SLC44A3Q8N4M1 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC19.61■□□□□ 0.73
SLC44A3Q8N4M1 TBCB-205ENST00000585746 875 ntTSL 3 BASIC19.61■□□□□ 0.73
SLC44A3Q8N4M1 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
SLC44A3Q8N4M1 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC19.61■□□□□ 0.73
SLC44A3Q8N4M1 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
SLC44A3Q8N4M1 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SLC44A3Q8N4M1 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
SLC44A3Q8N4M1 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
SLC44A3Q8N4M1 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC19.61■□□□□ 0.73
SLC44A3Q8N4M1 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC19.61■□□□□ 0.73
SLC44A3Q8N4M1 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SLC44A3Q8N4M1 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
SLC44A3Q8N4M1 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SLC44A3Q8N4M1 ME2-216ENST00000639850 2331 ntTSL 5 BASIC19.6■□□□□ 0.73
SLC44A3Q8N4M1 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SLC44A3Q8N4M1 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC19.6■□□□□ 0.73
SLC44A3Q8N4M1 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC19.6■□□□□ 0.73
SLC44A3Q8N4M1 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SLC44A3Q8N4M1 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC19.6■□□□□ 0.73
SLC44A3Q8N4M1 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC19.6■□□□□ 0.73
SLC44A3Q8N4M1 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
SLC44A3Q8N4M1 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SLC44A3Q8N4M1 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC19.6■□□□□ 0.73
SLC44A3Q8N4M1 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SLC44A3Q8N4M1 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
SLC44A3Q8N4M1 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SLC44A3Q8N4M1 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SLC44A3Q8N4M1 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC19.6■□□□□ 0.73
SLC44A3Q8N4M1 NUS1P1-201ENST00000446295 882 ntBASIC19.6■□□□□ 0.73
SLC44A3Q8N4M1 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC19.6■□□□□ 0.73
SLC44A3Q8N4M1 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
SLC44A3Q8N4M1 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
SLC44A3Q8N4M1 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC19.6■□□□□ 0.73
SLC44A3Q8N4M1 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC19.6■□□□□ 0.73
SLC44A3Q8N4M1 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC19.6■□□□□ 0.73
SLC44A3Q8N4M1 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC19.6■□□□□ 0.73
SLC44A3Q8N4M1 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SLC44A3Q8N4M1 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC19.6■□□□□ 0.73
SLC44A3Q8N4M1 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
SLC44A3Q8N4M1 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC19.6■□□□□ 0.73
SLC44A3Q8N4M1 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SLC44A3Q8N4M1 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SLC44A3Q8N4M1 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
SLC44A3Q8N4M1 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC19.59■□□□□ 0.73
SLC44A3Q8N4M1 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC19.59■□□□□ 0.73
SLC44A3Q8N4M1 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC19.59■□□□□ 0.73
SLC44A3Q8N4M1 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
SLC44A3Q8N4M1 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
SLC44A3Q8N4M1 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC19.59■□□□□ 0.73
SLC44A3Q8N4M1 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC19.59■□□□□ 0.73
SLC44A3Q8N4M1 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC19.59■□□□□ 0.73
SLC44A3Q8N4M1 AC024243.1-201ENST00000609234 778 ntBASIC19.59■□□□□ 0.73
SLC44A3Q8N4M1 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC19.59■□□□□ 0.73
SLC44A3Q8N4M1 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC19.59■□□□□ 0.73
SLC44A3Q8N4M1 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
SLC44A3Q8N4M1 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC19.59■□□□□ 0.73
SLC44A3Q8N4M1 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
SLC44A3Q8N4M1 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
SLC44A3Q8N4M1 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
SLC44A3Q8N4M1 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
SLC44A3Q8N4M1 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SLC44A3Q8N4M1 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
SLC44A3Q8N4M1 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.73
SLC44A3Q8N4M1 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC19.58■□□□□ 0.73
SLC44A3Q8N4M1 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
SLC44A3Q8N4M1 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
SLC44A3Q8N4M1 AC009237.14-201ENST00000609975 1594 ntBASIC19.58■□□□□ 0.73
SLC44A3Q8N4M1 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
SLC44A3Q8N4M1 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
SLC44A3Q8N4M1 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
SLC44A3Q8N4M1 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
SLC44A3Q8N4M1 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
SLC44A3Q8N4M1 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
SLC44A3Q8N4M1 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC19.58■□□□□ 0.72
SLC44A3Q8N4M1 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
SLC44A3Q8N4M1 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC19.58■□□□□ 0.72
SLC44A3Q8N4M1 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC19.58■□□□□ 0.72
SLC44A3Q8N4M1 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.72
SLC44A3Q8N4M1 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC19.58■□□□□ 0.72
SLC44A3Q8N4M1 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC19.58■□□□□ 0.72
SLC44A3Q8N4M1 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC19.58■□□□□ 0.72
SLC44A3Q8N4M1 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
SLC44A3Q8N4M1 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC19.58■□□□□ 0.72
SLC44A3Q8N4M1 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
SLC44A3Q8N4M1 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC19.58■□□□□ 0.72
SLC44A3Q8N4M1 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC19.58■□□□□ 0.72
SLC44A3Q8N4M1 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC19.58■□□□□ 0.72
SLC44A3Q8N4M1 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SLC44A3Q8N4M1 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC19.57■□□□□ 0.72
SLC44A3Q8N4M1 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
SLC44A3Q8N4M1 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
SLC44A3Q8N4M1 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC19.57■□□□□ 0.72
SLC44A3Q8N4M1 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
SLC44A3Q8N4M1 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SLC44A3Q8N4M1 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
SLC44A3Q8N4M1 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
SLC44A3Q8N4M1 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
SLC44A3Q8N4M1 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC19.57■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms