Protein–RNA interactions for Protein: Q8IWT3

CUL9, Cullin-9, humanhuman

Predictions only

Length 2,517 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUL9Q8IWT3 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CUL9Q8IWT3 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
CUL9Q8IWT3 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CUL9Q8IWT3 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC19.43■□□□□ 0.7
CUL9Q8IWT3 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC19.43■□□□□ 0.7
CUL9Q8IWT3 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC19.43■□□□□ 0.7
CUL9Q8IWT3 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
CUL9Q8IWT3 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
CUL9Q8IWT3 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CUL9Q8IWT3 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CUL9Q8IWT3 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC19.42■□□□□ 0.7
CUL9Q8IWT3 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC19.42■□□□□ 0.7
CUL9Q8IWT3 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
CUL9Q8IWT3 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
CUL9Q8IWT3 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CUL9Q8IWT3 AC008608.2-201ENST00000606089 416 ntBASIC19.42■□□□□ 0.7
CUL9Q8IWT3 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CUL9Q8IWT3 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC19.42■□□□□ 0.7
CUL9Q8IWT3 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC19.42■□□□□ 0.7
CUL9Q8IWT3 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
CUL9Q8IWT3 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC19.42■□□□□ 0.7
CUL9Q8IWT3 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC19.42■□□□□ 0.7
CUL9Q8IWT3 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC19.42■□□□□ 0.7
CUL9Q8IWT3 GLRB-205ENST00000512619 728 ntTSL 3 BASIC19.42■□□□□ 0.7
CUL9Q8IWT3 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CUL9Q8IWT3 SNX12-206ENST00000622259 661 ntTSL 5 BASIC19.42■□□□□ 0.7
CUL9Q8IWT3 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
CUL9Q8IWT3 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CUL9Q8IWT3 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
CUL9Q8IWT3 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CUL9Q8IWT3 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC19.41■□□□□ 0.7
CUL9Q8IWT3 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CUL9Q8IWT3 HIST2H3DP1-201ENST00000401004 416 ntBASIC19.41■□□□□ 0.7
CUL9Q8IWT3 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC19.41■□□□□ 0.7
CUL9Q8IWT3 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC19.41■□□□□ 0.7
CUL9Q8IWT3 AL078644.1-201ENST00000609881 752 ntBASIC19.41■□□□□ 0.7
CUL9Q8IWT3 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CUL9Q8IWT3 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC19.41■□□□□ 0.7
CUL9Q8IWT3 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CUL9Q8IWT3 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC19.41■□□□□ 0.7
CUL9Q8IWT3 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
CUL9Q8IWT3 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CUL9Q8IWT3 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CUL9Q8IWT3 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC19.41■□□□□ 0.7
CUL9Q8IWT3 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CUL9Q8IWT3 KRT8P20-201ENST00000423953 1409 ntBASIC19.4■□□□□ 0.7
CUL9Q8IWT3 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CUL9Q8IWT3 HLA-DPB2-205ENST00000435074 1188 ntBASIC19.4■□□□□ 0.7
CUL9Q8IWT3 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC19.4■□□□□ 0.7
CUL9Q8IWT3 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC19.4■□□□□ 0.7
CUL9Q8IWT3 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC19.4■□□□□ 0.7
CUL9Q8IWT3 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CUL9Q8IWT3 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CUL9Q8IWT3 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CUL9Q8IWT3 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC19.4■□□□□ 0.7
CUL9Q8IWT3 RBM17P3-201ENST00000417687 1192 ntBASIC19.4■□□□□ 0.7
CUL9Q8IWT3 AC007967.2-201ENST00000432613 625 ntBASIC19.4■□□□□ 0.7
CUL9Q8IWT3 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC19.4■□□□□ 0.7
CUL9Q8IWT3 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CUL9Q8IWT3 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
CUL9Q8IWT3 KRT8P3-201ENST00000519669 1449 ntBASIC19.39■□□□□ 0.69
CUL9Q8IWT3 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CUL9Q8IWT3 CD99-202ENST00000381180 530 ntTSL 2 BASIC19.39■□□□□ 0.69
CUL9Q8IWT3 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC19.39■□□□□ 0.69
CUL9Q8IWT3 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CUL9Q8IWT3 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC19.39■□□□□ 0.69
CUL9Q8IWT3 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CUL9Q8IWT3 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CUL9Q8IWT3 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
CUL9Q8IWT3 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CUL9Q8IWT3 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
CUL9Q8IWT3 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC19.39■□□□□ 0.69
CUL9Q8IWT3 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC19.39■□□□□ 0.69
CUL9Q8IWT3 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC19.39■□□□□ 0.69
CUL9Q8IWT3 AC012640.2-201ENST00000561606 901 ntBASIC19.39■□□□□ 0.69
CUL9Q8IWT3 PAM16-208ENST00000573553 722 ntTSL 2 BASIC19.39■□□□□ 0.69
CUL9Q8IWT3 AP001269.4-201ENST00000609611 512 ntBASIC19.39■□□□□ 0.69
CUL9Q8IWT3 AC079602.3-201ENST00000623931 403 ntBASIC19.39■□□□□ 0.69
CUL9Q8IWT3 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC19.38■□□□□ 0.69
CUL9Q8IWT3 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CUL9Q8IWT3 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC19.38■□□□□ 0.69
CUL9Q8IWT3 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC19.38■□□□□ 0.69
CUL9Q8IWT3 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CUL9Q8IWT3 AL592071.1-201ENST00000611956 408 ntBASIC19.38■□□□□ 0.69
CUL9Q8IWT3 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC19.38■□□□□ 0.69
CUL9Q8IWT3 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC19.38■□□□□ 0.69
CUL9Q8IWT3 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CUL9Q8IWT3 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CUL9Q8IWT3 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC19.38■□□□□ 0.69
CUL9Q8IWT3 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
CUL9Q8IWT3 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CUL9Q8IWT3 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC19.38■□□□□ 0.69
CUL9Q8IWT3 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC19.38■□□□□ 0.69
CUL9Q8IWT3 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
CUL9Q8IWT3 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC19.38■□□□□ 0.69
CUL9Q8IWT3 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC19.38■□□□□ 0.69
CUL9Q8IWT3 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CUL9Q8IWT3 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC19.38■□□□□ 0.69
CUL9Q8IWT3 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC19.37■□□□□ 0.69
CUL9Q8IWT3 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms