Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
HERC6Q8IVU3 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
HERC6Q8IVU3 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC20.73■□□□□ 0.91
HERC6Q8IVU3 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
HERC6Q8IVU3 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC20.73■□□□□ 0.91
HERC6Q8IVU3 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
HERC6Q8IVU3 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
HERC6Q8IVU3 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
HERC6Q8IVU3 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
HERC6Q8IVU3 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC20.72■□□□□ 0.91
HERC6Q8IVU3 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC20.72■□□□□ 0.91
HERC6Q8IVU3 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
HERC6Q8IVU3 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
HERC6Q8IVU3 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
HERC6Q8IVU3 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
HERC6Q8IVU3 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
HERC6Q8IVU3 AP000347.1-202ENST00000435868 847 ntBASIC20.72■□□□□ 0.91
HERC6Q8IVU3 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC20.72■□□□□ 0.91
HERC6Q8IVU3 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC20.72■□□□□ 0.91
HERC6Q8IVU3 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
HERC6Q8IVU3 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC20.72■□□□□ 0.91
HERC6Q8IVU3 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC20.72■□□□□ 0.91
HERC6Q8IVU3 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
HERC6Q8IVU3 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
HERC6Q8IVU3 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC20.72■□□□□ 0.91
HERC6Q8IVU3 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
HERC6Q8IVU3 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
HERC6Q8IVU3 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
HERC6Q8IVU3 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
HERC6Q8IVU3 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC20.72■□□□□ 0.91
HERC6Q8IVU3 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
HERC6Q8IVU3 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC20.71■□□□□ 0.91
HERC6Q8IVU3 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
HERC6Q8IVU3 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
HERC6Q8IVU3 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
HERC6Q8IVU3 BUB3-202ENST00000368859 667 ntTSL 3 BASIC20.71■□□□□ 0.91
HERC6Q8IVU3 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
HERC6Q8IVU3 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC20.71■□□□□ 0.91
HERC6Q8IVU3 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
HERC6Q8IVU3 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC20.71■□□□□ 0.91
HERC6Q8IVU3 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC20.71■□□□□ 0.91
HERC6Q8IVU3 MIR4674-201ENST00000582457 87 ntBASIC20.71■□□□□ 0.91
HERC6Q8IVU3 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
HERC6Q8IVU3 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
HERC6Q8IVU3 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
HERC6Q8IVU3 CR769767.2-201ENST00000622735 460 ntBASIC20.71■□□□□ 0.91
HERC6Q8IVU3 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC20.71■□□□□ 0.91
HERC6Q8IVU3 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
HERC6Q8IVU3 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC20.71■□□□□ 0.91
HERC6Q8IVU3 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC20.71■□□□□ 0.91
HERC6Q8IVU3 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
HERC6Q8IVU3 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
HERC6Q8IVU3 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC20.7■□□□□ 0.9
HERC6Q8IVU3 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
HERC6Q8IVU3 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
HERC6Q8IVU3 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC20.7■□□□□ 0.9
HERC6Q8IVU3 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
HERC6Q8IVU3 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
HERC6Q8IVU3 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
HERC6Q8IVU3 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
HERC6Q8IVU3 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
HERC6Q8IVU3 TSSC2-201ENST00000450217 709 ntBASIC20.7■□□□□ 0.9
HERC6Q8IVU3 KRT17P6-201ENST00000453795 1220 ntBASIC20.7■□□□□ 0.9
HERC6Q8IVU3 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC20.7■□□□□ 0.9
HERC6Q8IVU3 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC20.7■□□□□ 0.9
HERC6Q8IVU3 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC20.7■□□□□ 0.9
HERC6Q8IVU3 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC20.7■□□□□ 0.9
HERC6Q8IVU3 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
HERC6Q8IVU3 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC20.7■□□□□ 0.9
HERC6Q8IVU3 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC20.7■□□□□ 0.9
HERC6Q8IVU3 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
HERC6Q8IVU3 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
HERC6Q8IVU3 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
HERC6Q8IVU3 CD37-204ENST00000535669 1674 ntTSL 2 BASIC20.7■□□□□ 0.9
HERC6Q8IVU3 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
HERC6Q8IVU3 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
HERC6Q8IVU3 KRT8P10-201ENST00000450021 1447 ntBASIC20.7■□□□□ 0.9
HERC6Q8IVU3 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC20.69■□□□□ 0.9
HERC6Q8IVU3 ME2-216ENST00000639850 2331 ntTSL 5 BASIC20.69■□□□□ 0.9
HERC6Q8IVU3 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC20.69■□□□□ 0.9
HERC6Q8IVU3 FAAHP1-202ENST00000446499 1238 ntBASIC20.69■□□□□ 0.9
HERC6Q8IVU3 RASA4DP-201ENST00000460726 1199 ntBASIC20.69■□□□□ 0.9
HERC6Q8IVU3 AC092597.1-201ENST00000487352 616 ntBASIC20.69■□□□□ 0.9
HERC6Q8IVU3 UNC93B7-201ENST00000509439 705 ntBASIC20.69■□□□□ 0.9
HERC6Q8IVU3 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC20.69■□□□□ 0.9
HERC6Q8IVU3 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
HERC6Q8IVU3 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
HERC6Q8IVU3 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
HERC6Q8IVU3 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
HERC6Q8IVU3 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
HERC6Q8IVU3 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
HERC6Q8IVU3 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
HERC6Q8IVU3 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
HERC6Q8IVU3 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
HERC6Q8IVU3 FEM1AP1-201ENST00000431297 1995 ntBASIC20.68■□□□□ 0.9
HERC6Q8IVU3 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
HERC6Q8IVU3 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC20.68■□□□□ 0.9
HERC6Q8IVU3 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
HERC6Q8IVU3 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
HERC6Q8IVU3 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms