Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 KRT8P17-201ENST00000453110 1448 ntBASIC20.3■□□□□ 0.84
RNF135Q8IUD6 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RNF135Q8IUD6 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RNF135Q8IUD6 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RNF135Q8IUD6 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RNF135Q8IUD6 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RNF135Q8IUD6 FXN-203ENST00000396366 922 ntTSL 2 BASIC20.3■□□□□ 0.84
RNF135Q8IUD6 AC004951.3-201ENST00000418645 1148 ntBASIC20.3■□□□□ 0.84
RNF135Q8IUD6 TSPY21P-201ENST00000433481 731 ntBASIC20.3■□□□□ 0.84
RNF135Q8IUD6 TSPY23P-201ENST00000440136 739 ntBASIC20.3■□□□□ 0.84
RNF135Q8IUD6 KRT18P38-201ENST00000449496 1282 ntBASIC20.3■□□□□ 0.84
RNF135Q8IUD6 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC20.3■□□□□ 0.84
RNF135Q8IUD6 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC20.3■□□□□ 0.84
RNF135Q8IUD6 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
RNF135Q8IUD6 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC20.3■□□□□ 0.84
RNF135Q8IUD6 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC20.3■□□□□ 0.84
RNF135Q8IUD6 AC008622.2-201ENST00000617006 1229 ntBASIC20.3■□□□□ 0.84
RNF135Q8IUD6 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC20.3■□□□□ 0.84
RNF135Q8IUD6 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RNF135Q8IUD6 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
RNF135Q8IUD6 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
RNF135Q8IUD6 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
RNF135Q8IUD6 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
RNF135Q8IUD6 AC112907.3-201ENST00000577781 2400 ntBASIC20.29■□□□□ 0.84
RNF135Q8IUD6 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
RNF135Q8IUD6 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RNF135Q8IUD6 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RNF135Q8IUD6 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RNF135Q8IUD6 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RNF135Q8IUD6 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RNF135Q8IUD6 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC20.29■□□□□ 0.84
RNF135Q8IUD6 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RNF135Q8IUD6 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
RNF135Q8IUD6 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
RNF135Q8IUD6 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC20.29■□□□□ 0.84
RNF135Q8IUD6 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC20.29■□□□□ 0.84
RNF135Q8IUD6 GXYLT1P6-201ENST00000456472 1187 ntBASIC20.29■□□□□ 0.84
RNF135Q8IUD6 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC20.29■□□□□ 0.84
RNF135Q8IUD6 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
RNF135Q8IUD6 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
RNF135Q8IUD6 RN7SL510P-201ENST00000581311 263 ntBASIC20.29■□□□□ 0.84
RNF135Q8IUD6 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC20.29■□□□□ 0.84
RNF135Q8IUD6 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
RNF135Q8IUD6 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RNF135Q8IUD6 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RNF135Q8IUD6 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RNF135Q8IUD6 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
RNF135Q8IUD6 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
RNF135Q8IUD6 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC20.28■□□□□ 0.84
RNF135Q8IUD6 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC20.28■□□□□ 0.84
RNF135Q8IUD6 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC20.28■□□□□ 0.84
RNF135Q8IUD6 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
RNF135Q8IUD6 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RNF135Q8IUD6 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RNF135Q8IUD6 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC20.28■□□□□ 0.84
RNF135Q8IUD6 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RNF135Q8IUD6 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RNF135Q8IUD6 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RNF135Q8IUD6 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RNF135Q8IUD6 ATP5G2P1-201ENST00000433580 426 ntBASIC20.28■□□□□ 0.84
RNF135Q8IUD6 TSPY17P-201ENST00000450329 467 ntBASIC20.28■□□□□ 0.84
RNF135Q8IUD6 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC20.28■□□□□ 0.84
RNF135Q8IUD6 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
RNF135Q8IUD6 AL023803.3-201ENST00000615559 522 ntBASIC20.28■□□□□ 0.84
RNF135Q8IUD6 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
RNF135Q8IUD6 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
RNF135Q8IUD6 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC20.28■□□□□ 0.84
RNF135Q8IUD6 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
RNF135Q8IUD6 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RNF135Q8IUD6 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC20.27■□□□□ 0.84
RNF135Q8IUD6 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
RNF135Q8IUD6 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC20.27■□□□□ 0.84
RNF135Q8IUD6 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC20.27■□□□□ 0.84
RNF135Q8IUD6 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
RNF135Q8IUD6 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC20.27■□□□□ 0.84
RNF135Q8IUD6 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
RNF135Q8IUD6 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC20.27■□□□□ 0.84
RNF135Q8IUD6 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
RNF135Q8IUD6 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RNF135Q8IUD6 TUBB8P6-201ENST00000436895 1288 ntBASIC20.27■□□□□ 0.84
RNF135Q8IUD6 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
RNF135Q8IUD6 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC20.27■□□□□ 0.84
RNF135Q8IUD6 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC20.27■□□□□ 0.84
RNF135Q8IUD6 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC20.27■□□□□ 0.84
RNF135Q8IUD6 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC20.27■□□□□ 0.84
RNF135Q8IUD6 ETFA-216ENST00000560726 942 ntTSL 3 BASIC20.27■□□□□ 0.84
RNF135Q8IUD6 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC20.27■□□□□ 0.84
RNF135Q8IUD6 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC20.27■□□□□ 0.84
RNF135Q8IUD6 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
RNF135Q8IUD6 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC20.27■□□□□ 0.84
RNF135Q8IUD6 AC006538.3-201ENST00000612495 578 ntBASIC20.27■□□□□ 0.84
RNF135Q8IUD6 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
RNF135Q8IUD6 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
RNF135Q8IUD6 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.83
RNF135Q8IUD6 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.83
RNF135Q8IUD6 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RNF135Q8IUD6 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
RNF135Q8IUD6 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
RNF135Q8IUD6 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
RNF135Q8IUD6 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms