Protein–RNA interactions for Protein: Q86YS6

RAB43, Ras-related protein Rab-43, humanhuman

Predictions only

Length 212 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB43Q86YS6 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RAB43Q86YS6 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RAB43Q86YS6 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
RAB43Q86YS6 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC18.27■□□□□ 0.52
RAB43Q86YS6 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
RAB43Q86YS6 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC18.27■□□□□ 0.52
RAB43Q86YS6 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC18.27■□□□□ 0.52
RAB43Q86YS6 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC18.27■□□□□ 0.52
RAB43Q86YS6 P4HB-223ENST00000576390 439 ntTSL 4 BASIC18.27■□□□□ 0.52
RAB43Q86YS6 AP005242.2-201ENST00000580065 1175 ntBASIC18.27■□□□□ 0.52
RAB43Q86YS6 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RAB43Q86YS6 AC010947.1-201ENST00000623454 693 ntBASIC18.27■□□□□ 0.52
RAB43Q86YS6 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC18.27■□□□□ 0.52
RAB43Q86YS6 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC18.27■□□□□ 0.52
RAB43Q86YS6 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RAB43Q86YS6 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
RAB43Q86YS6 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC18.27■□□□□ 0.51
RAB43Q86YS6 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.51
RAB43Q86YS6 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.51
RAB43Q86YS6 CYP2D8P-201ENST00000433633 1490 ntBASIC18.26■□□□□ 0.51
RAB43Q86YS6 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
RAB43Q86YS6 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
RAB43Q86YS6 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
RAB43Q86YS6 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
RAB43Q86YS6 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RAB43Q86YS6 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RAB43Q86YS6 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
RAB43Q86YS6 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RAB43Q86YS6 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RAB43Q86YS6 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC18.26■□□□□ 0.51
RAB43Q86YS6 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
RAB43Q86YS6 AC005521.1-201ENST00000393351 872 ntBASIC18.26■□□□□ 0.51
RAB43Q86YS6 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
RAB43Q86YS6 AL137013.1-201ENST00000432946 1228 ntBASIC18.26■□□□□ 0.51
RAB43Q86YS6 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC18.26■□□□□ 0.51
RAB43Q86YS6 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC18.26■□□□□ 0.51
RAB43Q86YS6 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
RAB43Q86YS6 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC18.26■□□□□ 0.51
RAB43Q86YS6 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC18.26■□□□□ 0.51
RAB43Q86YS6 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RAB43Q86YS6 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RAB43Q86YS6 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RAB43Q86YS6 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
RAB43Q86YS6 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
RAB43Q86YS6 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC18.26■□□□□ 0.51
RAB43Q86YS6 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
RAB43Q86YS6 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC18.26■□□□□ 0.51
RAB43Q86YS6 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
RAB43Q86YS6 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC18.25■□□□□ 0.51
RAB43Q86YS6 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RAB43Q86YS6 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
RAB43Q86YS6 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC18.25■□□□□ 0.51
RAB43Q86YS6 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
RAB43Q86YS6 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC18.25■□□□□ 0.51
RAB43Q86YS6 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
RAB43Q86YS6 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
RAB43Q86YS6 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC18.25■□□□□ 0.51
RAB43Q86YS6 MESTP1-201ENST00000404287 994 ntBASIC18.25■□□□□ 0.51
RAB43Q86YS6 AC097488.1-201ENST00000507834 756 ntBASIC18.25■□□□□ 0.51
RAB43Q86YS6 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
RAB43Q86YS6 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC18.25■□□□□ 0.51
RAB43Q86YS6 DUT-205ENST00000558813 769 ntTSL 2 BASIC18.25■□□□□ 0.51
RAB43Q86YS6 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC18.25■□□□□ 0.51
RAB43Q86YS6 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC18.25■□□□□ 0.51
RAB43Q86YS6 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC18.25■□□□□ 0.51
RAB43Q86YS6 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
RAB43Q86YS6 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
RAB43Q86YS6 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RAB43Q86YS6 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RAB43Q86YS6 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
RAB43Q86YS6 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
RAB43Q86YS6 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
RAB43Q86YS6 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RAB43Q86YS6 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
RAB43Q86YS6 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
RAB43Q86YS6 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RAB43Q86YS6 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RAB43Q86YS6 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
RAB43Q86YS6 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC18.24■□□□□ 0.51
RAB43Q86YS6 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC18.24■□□□□ 0.51
RAB43Q86YS6 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RAB43Q86YS6 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RAB43Q86YS6 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RAB43Q86YS6 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC18.24■□□□□ 0.51
RAB43Q86YS6 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RAB43Q86YS6 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RAB43Q86YS6 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
RAB43Q86YS6 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
RAB43Q86YS6 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RAB43Q86YS6 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
RAB43Q86YS6 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
RAB43Q86YS6 SLC25A3P1-201ENST00000443844 931 ntBASIC18.24■□□□□ 0.51
RAB43Q86YS6 TMA16-209ENST00000513272 803 ntTSL 2 BASIC18.24■□□□□ 0.51
RAB43Q86YS6 AL049597.2-201ENST00000565575 961 ntBASIC18.24■□□□□ 0.51
RAB43Q86YS6 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC18.24■□□□□ 0.51
RAB43Q86YS6 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RAB43Q86YS6 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RAB43Q86YS6 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RAB43Q86YS6 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC18.24■□□□□ 0.51
RAB43Q86YS6 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms