Protein–RNA interactions for Protein: Q86VH4

LRRTM4, Leucine-rich repeat transmembrane neuronal protein 4, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM4Q86VH4 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC18.8■□□□□ 0.6
LRRTM4Q86VH4 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
LRRTM4Q86VH4 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
LRRTM4Q86VH4 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC18.8■□□□□ 0.6
LRRTM4Q86VH4 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC18.8■□□□□ 0.6
LRRTM4Q86VH4 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC18.8■□□□□ 0.6
LRRTM4Q86VH4 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
LRRTM4Q86VH4 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC18.8■□□□□ 0.6
LRRTM4Q86VH4 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC18.8■□□□□ 0.6
LRRTM4Q86VH4 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
LRRTM4Q86VH4 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC18.8■□□□□ 0.6
LRRTM4Q86VH4 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC18.8■□□□□ 0.6
LRRTM4Q86VH4 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC18.8■□□□□ 0.6
LRRTM4Q86VH4 AC097493.4-201ENST00000641197 219 ntBASIC18.8■□□□□ 0.6
LRRTM4Q86VH4 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
LRRTM4Q86VH4 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
LRRTM4Q86VH4 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC18.8■□□□□ 0.6
LRRTM4Q86VH4 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
LRRTM4Q86VH4 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
LRRTM4Q86VH4 LINC01568-207ENST00000641790 1380 ntBASIC18.8■□□□□ 0.6
LRRTM4Q86VH4 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC18.8■□□□□ 0.6
LRRTM4Q86VH4 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
LRRTM4Q86VH4 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LRRTM4Q86VH4 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LRRTM4Q86VH4 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC18.79■□□□□ 0.6
LRRTM4Q86VH4 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
LRRTM4Q86VH4 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LRRTM4Q86VH4 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LRRTM4Q86VH4 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
LRRTM4Q86VH4 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
LRRTM4Q86VH4 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
LRRTM4Q86VH4 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC18.79■□□□□ 0.6
LRRTM4Q86VH4 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
LRRTM4Q86VH4 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LRRTM4Q86VH4 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
LRRTM4Q86VH4 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC18.79■□□□□ 0.6
LRRTM4Q86VH4 CRAT-202ENST00000393384 973 ntTSL 2 BASIC18.79■□□□□ 0.6
LRRTM4Q86VH4 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC18.79■□□□□ 0.6
LRRTM4Q86VH4 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC18.79■□□□□ 0.6
LRRTM4Q86VH4 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
LRRTM4Q86VH4 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
LRRTM4Q86VH4 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LRRTM4Q86VH4 AC145285.6-201ENST00000604632 637 ntBASIC18.79■□□□□ 0.6
LRRTM4Q86VH4 AC012306.2-201ENST00000609350 630 ntBASIC18.79■□□□□ 0.6
LRRTM4Q86VH4 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC18.79■□□□□ 0.6
LRRTM4Q86VH4 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC18.79■□□□□ 0.6
LRRTM4Q86VH4 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LRRTM4Q86VH4 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
LRRTM4Q86VH4 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LRRTM4Q86VH4 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC18.79■□□□□ 0.6
LRRTM4Q86VH4 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
LRRTM4Q86VH4 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
LRRTM4Q86VH4 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC18.78■□□□□ 0.6
LRRTM4Q86VH4 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LRRTM4Q86VH4 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC18.78■□□□□ 0.6
LRRTM4Q86VH4 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
LRRTM4Q86VH4 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
LRRTM4Q86VH4 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC18.78■□□□□ 0.6
LRRTM4Q86VH4 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LRRTM4Q86VH4 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
LRRTM4Q86VH4 TSPY14P-201ENST00000303979 915 ntBASIC18.78■□□□□ 0.6
LRRTM4Q86VH4 HIST1H2APS4-201ENST00000362070 348 ntBASIC18.78■□□□□ 0.6
LRRTM4Q86VH4 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC18.78■□□□□ 0.6
LRRTM4Q86VH4 EGLN1P1-201ENST00000531623 762 ntBASIC18.78■□□□□ 0.6
LRRTM4Q86VH4 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC18.78■□□□□ 0.6
LRRTM4Q86VH4 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC18.78■□□□□ 0.6
LRRTM4Q86VH4 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC18.78■□□□□ 0.6
LRRTM4Q86VH4 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC18.78■□□□□ 0.6
LRRTM4Q86VH4 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
LRRTM4Q86VH4 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC18.78■□□□□ 0.6
LRRTM4Q86VH4 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LRRTM4Q86VH4 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
LRRTM4Q86VH4 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LRRTM4Q86VH4 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
LRRTM4Q86VH4 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
LRRTM4Q86VH4 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
LRRTM4Q86VH4 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC18.77■□□□□ 0.6
LRRTM4Q86VH4 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC18.77■□□□□ 0.6
LRRTM4Q86VH4 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
LRRTM4Q86VH4 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC18.77■□□□□ 0.6
LRRTM4Q86VH4 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
LRRTM4Q86VH4 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC18.77■□□□□ 0.6
LRRTM4Q86VH4 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC18.77■□□□□ 0.6
LRRTM4Q86VH4 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC18.77■□□□□ 0.6
LRRTM4Q86VH4 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
LRRTM4Q86VH4 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC18.77■□□□□ 0.6
LRRTM4Q86VH4 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
LRRTM4Q86VH4 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
LRRTM4Q86VH4 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
LRRTM4Q86VH4 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
LRRTM4Q86VH4 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC18.76■□□□□ 0.59
LRRTM4Q86VH4 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC18.76■□□□□ 0.59
LRRTM4Q86VH4 KRT18P22-201ENST00000402024 1347 ntBASIC18.76■□□□□ 0.59
LRRTM4Q86VH4 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
LRRTM4Q86VH4 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC18.76■□□□□ 0.59
LRRTM4Q86VH4 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC18.76■□□□□ 0.59
LRRTM4Q86VH4 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC18.76■□□□□ 0.59
LRRTM4Q86VH4 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC18.76■□□□□ 0.59
LRRTM4Q86VH4 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
LRRTM4Q86VH4 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 76.7 ms