Protein–RNA interactions for Protein: Q7Z7G8

VPS13B, Vacuolar protein sorting-associated protein 13B, humanhuman

Predictions only

Length 4,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13BQ7Z7G8 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
VPS13BQ7Z7G8 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
VPS13BQ7Z7G8 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
VPS13BQ7Z7G8 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
VPS13BQ7Z7G8 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC11.83□□□□□ -0.52
VPS13BQ7Z7G8 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
VPS13BQ7Z7G8 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
VPS13BQ7Z7G8 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC11.83□□□□□ -0.52
VPS13BQ7Z7G8 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC11.83□□□□□ -0.52
VPS13BQ7Z7G8 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
VPS13BQ7Z7G8 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC11.83□□□□□ -0.52
VPS13BQ7Z7G8 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
VPS13BQ7Z7G8 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC11.83□□□□□ -0.52
VPS13BQ7Z7G8 TSPY12P-201ENST00000421279 868 ntBASIC11.83□□□□□ -0.52
VPS13BQ7Z7G8 HLA-F-220ENST00000434407 884 ntBASIC11.83□□□□□ -0.52
VPS13BQ7Z7G8 AC106795.1-205ENST00000512851 1056 ntBASIC11.83□□□□□ -0.52
VPS13BQ7Z7G8 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
VPS13BQ7Z7G8 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
VPS13BQ7Z7G8 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC11.83□□□□□ -0.52
VPS13BQ7Z7G8 LINC01006-201ENST00000333319 2292 ntBASIC11.83□□□□□ -0.52
VPS13BQ7Z7G8 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
VPS13BQ7Z7G8 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC11.83□□□□□ -0.52
VPS13BQ7Z7G8 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
VPS13BQ7Z7G8 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
VPS13BQ7Z7G8 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
VPS13BQ7Z7G8 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC11.83□□□□□ -0.52
VPS13BQ7Z7G8 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC11.82□□□□□ -0.52
VPS13BQ7Z7G8 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC11.82□□□□□ -0.52
VPS13BQ7Z7G8 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC11.82□□□□□ -0.52
VPS13BQ7Z7G8 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC11.82□□□□□ -0.52
VPS13BQ7Z7G8 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
VPS13BQ7Z7G8 HBZP1-201ENST00000354915 429 ntBASIC11.82□□□□□ -0.52
VPS13BQ7Z7G8 MIR662-201ENST00000384847 95 ntBASIC11.82□□□□□ -0.52
VPS13BQ7Z7G8 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
VPS13BQ7Z7G8 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC11.82□□□□□ -0.52
VPS13BQ7Z7G8 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC11.82□□□□□ -0.52
VPS13BQ7Z7G8 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC11.82□□□□□ -0.52
VPS13BQ7Z7G8 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
VPS13BQ7Z7G8 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
VPS13BQ7Z7G8 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC11.82□□□□□ -0.52
VPS13BQ7Z7G8 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
VPS13BQ7Z7G8 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
VPS13BQ7Z7G8 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
VPS13BQ7Z7G8 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC11.82□□□□□ -0.52
VPS13BQ7Z7G8 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
VPS13BQ7Z7G8 AC093525.10-201ENST00000625130 1569 ntBASIC11.82□□□□□ -0.52
VPS13BQ7Z7G8 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
VPS13BQ7Z7G8 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC11.82□□□□□ -0.52
VPS13BQ7Z7G8 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC11.82□□□□□ -0.52
VPS13BQ7Z7G8 TSPY19P-201ENST00000418461 509 ntBASIC11.82□□□□□ -0.52
VPS13BQ7Z7G8 TSPY18P-201ENST00000441642 509 ntBASIC11.82□□□□□ -0.52
VPS13BQ7Z7G8 BET1L-206ENST00000486280 665 ntTSL 3 BASIC11.82□□□□□ -0.52
VPS13BQ7Z7G8 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC11.82□□□□□ -0.52
VPS13BQ7Z7G8 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC11.82□□□□□ -0.52
VPS13BQ7Z7G8 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
VPS13BQ7Z7G8 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
VPS13BQ7Z7G8 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC11.81□□□□□ -0.52
VPS13BQ7Z7G8 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
VPS13BQ7Z7G8 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC11.81□□□□□ -0.52
VPS13BQ7Z7G8 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC11.81□□□□□ -0.52
VPS13BQ7Z7G8 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
VPS13BQ7Z7G8 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
VPS13BQ7Z7G8 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC11.81□□□□□ -0.52
VPS13BQ7Z7G8 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC11.81□□□□□ -0.52
VPS13BQ7Z7G8 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC11.81□□□□□ -0.52
VPS13BQ7Z7G8 PHB2-202ENST00000440277 996 ntTSL 5 BASIC11.81□□□□□ -0.52
VPS13BQ7Z7G8 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
VPS13BQ7Z7G8 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC11.81□□□□□ -0.52
VPS13BQ7Z7G8 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
VPS13BQ7Z7G8 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
VPS13BQ7Z7G8 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC11.81□□□□□ -0.52
VPS13BQ7Z7G8 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC11.81□□□□□ -0.52
VPS13BQ7Z7G8 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
VPS13BQ7Z7G8 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC11.81□□□□□ -0.52
VPS13BQ7Z7G8 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
VPS13BQ7Z7G8 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
VPS13BQ7Z7G8 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
VPS13BQ7Z7G8 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
VPS13BQ7Z7G8 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
VPS13BQ7Z7G8 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
VPS13BQ7Z7G8 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
VPS13BQ7Z7G8 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
VPS13BQ7Z7G8 FAAHP1-202ENST00000446499 1238 ntBASIC11.81□□□□□ -0.52
VPS13BQ7Z7G8 AC079781.3-201ENST00000449110 356 ntBASIC11.81□□□□□ -0.52
VPS13BQ7Z7G8 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC11.81□□□□□ -0.52
VPS13BQ7Z7G8 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC11.81□□□□□ -0.52
VPS13BQ7Z7G8 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
VPS13BQ7Z7G8 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
VPS13BQ7Z7G8 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
VPS13BQ7Z7G8 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
VPS13BQ7Z7G8 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
VPS13BQ7Z7G8 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
VPS13BQ7Z7G8 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC11.8□□□□□ -0.52
VPS13BQ7Z7G8 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
VPS13BQ7Z7G8 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC11.8□□□□□ -0.52
VPS13BQ7Z7G8 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC11.8□□□□□ -0.52
VPS13BQ7Z7G8 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
VPS13BQ7Z7G8 IL11-204ENST00000590625 1028 ntTSL 2 BASIC11.8□□□□□ -0.52
VPS13BQ7Z7G8 AC092329.2-201ENST00000598402 547 ntBASIC11.8□□□□□ -0.52
VPS13BQ7Z7G8 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms