Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
NHLRC1Q6VVB1 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
NHLRC1Q6VVB1 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
NHLRC1Q6VVB1 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
NHLRC1Q6VVB1 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC17.2■□□□□ 0.34
NHLRC1Q6VVB1 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC17.2■□□□□ 0.34
NHLRC1Q6VVB1 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC17.2■□□□□ 0.34
NHLRC1Q6VVB1 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
NHLRC1Q6VVB1 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
NHLRC1Q6VVB1 LINC01465-201ENST00000408887 1940 ntBASIC17.2■□□□□ 0.34
NHLRC1Q6VVB1 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
NHLRC1Q6VVB1 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
NHLRC1Q6VVB1 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
NHLRC1Q6VVB1 AC141586.3-201ENST00000562166 1838 ntBASIC17.2■□□□□ 0.34
NHLRC1Q6VVB1 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
NHLRC1Q6VVB1 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC17.2■□□□□ 0.34
NHLRC1Q6VVB1 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
NHLRC1Q6VVB1 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
NHLRC1Q6VVB1 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC17.2■□□□□ 0.34
NHLRC1Q6VVB1 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
NHLRC1Q6VVB1 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC17.2■□□□□ 0.34
NHLRC1Q6VVB1 C1QBPP2-201ENST00000528754 825 ntBASIC17.2■□□□□ 0.34
NHLRC1Q6VVB1 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
NHLRC1Q6VVB1 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC17.2■□□□□ 0.34
NHLRC1Q6VVB1 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
NHLRC1Q6VVB1 AL359736.2-201ENST00000621992 437 ntBASIC17.2■□□□□ 0.34
NHLRC1Q6VVB1 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC17.2■□□□□ 0.34
NHLRC1Q6VVB1 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
NHLRC1Q6VVB1 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
NHLRC1Q6VVB1 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC17.2■□□□□ 0.34
NHLRC1Q6VVB1 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC17.2■□□□□ 0.34
NHLRC1Q6VVB1 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
NHLRC1Q6VVB1 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
NHLRC1Q6VVB1 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC17.2■□□□□ 0.34
NHLRC1Q6VVB1 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
NHLRC1Q6VVB1 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC17.2■□□□□ 0.34
NHLRC1Q6VVB1 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
NHLRC1Q6VVB1 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
NHLRC1Q6VVB1 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
NHLRC1Q6VVB1 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
NHLRC1Q6VVB1 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
NHLRC1Q6VVB1 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
NHLRC1Q6VVB1 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
NHLRC1Q6VVB1 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
NHLRC1Q6VVB1 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC17.19■□□□□ 0.34
NHLRC1Q6VVB1 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC17.19■□□□□ 0.34
NHLRC1Q6VVB1 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
NHLRC1Q6VVB1 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
NHLRC1Q6VVB1 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
NHLRC1Q6VVB1 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
NHLRC1Q6VVB1 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC17.19■□□□□ 0.34
NHLRC1Q6VVB1 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
NHLRC1Q6VVB1 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC17.19■□□□□ 0.34
NHLRC1Q6VVB1 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC17.19■□□□□ 0.34
NHLRC1Q6VVB1 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
NHLRC1Q6VVB1 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC17.19■□□□□ 0.34
NHLRC1Q6VVB1 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC17.19■□□□□ 0.34
NHLRC1Q6VVB1 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
NHLRC1Q6VVB1 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC17.19■□□□□ 0.34
NHLRC1Q6VVB1 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
NHLRC1Q6VVB1 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
NHLRC1Q6VVB1 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
NHLRC1Q6VVB1 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
NHLRC1Q6VVB1 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
NHLRC1Q6VVB1 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC17.18■□□□□ 0.34
NHLRC1Q6VVB1 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC17.18■□□□□ 0.34
NHLRC1Q6VVB1 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
NHLRC1Q6VVB1 AC005082.1-201ENST00000413042 2259 ntBASIC17.18■□□□□ 0.34
NHLRC1Q6VVB1 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC17.18■□□□□ 0.34
NHLRC1Q6VVB1 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
NHLRC1Q6VVB1 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
NHLRC1Q6VVB1 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC17.18■□□□□ 0.34
NHLRC1Q6VVB1 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
NHLRC1Q6VVB1 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
NHLRC1Q6VVB1 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
NHLRC1Q6VVB1 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
NHLRC1Q6VVB1 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
NHLRC1Q6VVB1 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
NHLRC1Q6VVB1 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
NHLRC1Q6VVB1 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC17.18■□□□□ 0.34
NHLRC1Q6VVB1 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
NHLRC1Q6VVB1 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
NHLRC1Q6VVB1 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC17.18■□□□□ 0.34
NHLRC1Q6VVB1 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC17.18■□□□□ 0.34
NHLRC1Q6VVB1 AL353708.3-201ENST00000610272 989 ntBASIC17.18■□□□□ 0.34
NHLRC1Q6VVB1 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
NHLRC1Q6VVB1 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
NHLRC1Q6VVB1 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
NHLRC1Q6VVB1 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC17.18■□□□□ 0.34
NHLRC1Q6VVB1 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
NHLRC1Q6VVB1 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC17.18■□□□□ 0.34
NHLRC1Q6VVB1 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC17.18■□□□□ 0.34
NHLRC1Q6VVB1 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
NHLRC1Q6VVB1 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
NHLRC1Q6VVB1 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
NHLRC1Q6VVB1 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
NHLRC1Q6VVB1 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
NHLRC1Q6VVB1 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC17.17■□□□□ 0.34
NHLRC1Q6VVB1 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
NHLRC1Q6VVB1 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms