Protein–RNA interactions for Protein: Q5TAT6

COL13A1, Collagen alpha-1(XIII) chain, humanhuman

Predicted RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1Q5TAT6 MIR6752-201ENST00000618442 71 ntBASIC21.61■■□□□ 1.05
COL13A1Q5TAT6 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
COL13A1Q5TAT6 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
COL13A1Q5TAT6 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC21.61■■□□□ 1.05
COL13A1Q5TAT6 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
COL13A1Q5TAT6 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
COL13A1Q5TAT6 KRT8P41-201ENST00000533985 1514 ntBASIC21.6■■□□□ 1.05
COL13A1Q5TAT6 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
COL13A1Q5TAT6 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
COL13A1Q5TAT6 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
COL13A1Q5TAT6 VENTXP7-201ENST00000475503 772 ntBASIC21.6■■□□□ 1.05
COL13A1Q5TAT6 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC21.6■■□□□ 1.05
COL13A1Q5TAT6 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC21.6■■□□□ 1.05
COL13A1Q5TAT6 AC069262.1-201ENST00000539058 672 ntBASIC21.6■■□□□ 1.05
COL13A1Q5TAT6 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC21.6■■□□□ 1.05
COL13A1Q5TAT6 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC21.6■■□□□ 1.05
COL13A1Q5TAT6 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC21.6■■□□□ 1.05
COL13A1Q5TAT6 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC21.6■■□□□ 1.05
COL13A1Q5TAT6 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC21.6■■□□□ 1.05
COL13A1Q5TAT6 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
COL13A1Q5TAT6 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
COL13A1Q5TAT6 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
COL13A1Q5TAT6 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC21.6■■□□□ 1.05
COL13A1Q5TAT6 CD37-204ENST00000535669 1674 ntTSL 2 BASIC21.6■■□□□ 1.05
COL13A1Q5TAT6 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC21.59■■□□□ 1.05
COL13A1Q5TAT6 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
COL13A1Q5TAT6 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
COL13A1Q5TAT6 TMEM179-206ENST00000616017 1645 ntBASIC21.59■■□□□ 1.05
COL13A1Q5TAT6 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
COL13A1Q5TAT6 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC21.59■■□□□ 1.05
COL13A1Q5TAT6 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC21.59■■□□□ 1.05
COL13A1Q5TAT6 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC21.59■■□□□ 1.05
COL13A1Q5TAT6 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC21.59■■□□□ 1.05
COL13A1Q5TAT6 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
COL13A1Q5TAT6 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC21.59■■□□□ 1.05
COL13A1Q5TAT6 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC21.59■■□□□ 1.05
COL13A1Q5TAT6 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC21.59■■□□□ 1.05
COL13A1Q5TAT6 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC21.59■■□□□ 1.05
COL13A1Q5TAT6 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC21.59■■□□□ 1.05
COL13A1Q5TAT6 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC21.59■■□□□ 1.05
COL13A1Q5TAT6 Z92544.3-201ENST00000624747 417 ntBASIC21.59■■□□□ 1.05
COL13A1Q5TAT6 AC011484.1-201ENST00000377652 1995 ntBASIC21.59■■□□□ 1.05
COL13A1Q5TAT6 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
COL13A1Q5TAT6 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC21.59■■□□□ 1.05
COL13A1Q5TAT6 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC21.59■■□□□ 1.05
COL13A1Q5TAT6 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
COL13A1Q5TAT6 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
COL13A1Q5TAT6 OR8S1-201ENST00000310194 1080 ntBASIC21.58■■□□□ 1.05
COL13A1Q5TAT6 BAD-202ENST00000394531 631 ntTSL 3 BASIC21.58■■□□□ 1.05
COL13A1Q5TAT6 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC21.58■■□□□ 1.05
COL13A1Q5TAT6 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC21.58■■□□□ 1.05
COL13A1Q5TAT6 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC21.58■■□□□ 1.05
COL13A1Q5TAT6 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC21.58■■□□□ 1.05
COL13A1Q5TAT6 AC012640.2-201ENST00000561606 901 ntBASIC21.58■■□□□ 1.05
COL13A1Q5TAT6 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC21.58■■□□□ 1.05
COL13A1Q5TAT6 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC21.58■■□□□ 1.05
COL13A1Q5TAT6 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.05
COL13A1Q5TAT6 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.04
COL13A1Q5TAT6 HLA-J-201ENST00000462773 1622 ntBASIC21.58■■□□□ 1.04
COL13A1Q5TAT6 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC21.58■■□□□ 1.04
COL13A1Q5TAT6 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
COL13A1Q5TAT6 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
COL13A1Q5TAT6 LINC01465-201ENST00000408887 1940 ntBASIC21.57■■□□□ 1.04
COL13A1Q5TAT6 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
COL13A1Q5TAT6 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC21.57■■□□□ 1.04
COL13A1Q5TAT6 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
COL13A1Q5TAT6 SLC25A6P5-201ENST00000435663 894 ntBASIC21.57■■□□□ 1.04
COL13A1Q5TAT6 PON3-205ENST00000451904 1053 ntTSL 3 BASIC21.57■■□□□ 1.04
COL13A1Q5TAT6 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC21.57■■□□□ 1.04
COL13A1Q5TAT6 AP003733.1-201ENST00000491725 852 ntBASIC21.57■■□□□ 1.04
COL13A1Q5TAT6 PARP8-218ENST00000513738 596 ntTSL 4 BASIC21.57■■□□□ 1.04
COL13A1Q5TAT6 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
COL13A1Q5TAT6 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC21.57■■□□□ 1.04
COL13A1Q5TAT6 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC21.57■■□□□ 1.04
COL13A1Q5TAT6 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
COL13A1Q5TAT6 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
COL13A1Q5TAT6 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
COL13A1Q5TAT6 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
COL13A1Q5TAT6 EDF1-203ENST00000371649 790 ntTSL 2 BASIC21.56■■□□□ 1.04
COL13A1Q5TAT6 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC21.56■■□□□ 1.04
COL13A1Q5TAT6 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC21.56■■□□□ 1.04
COL13A1Q5TAT6 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC21.56■■□□□ 1.04
COL13A1Q5TAT6 RN7SL606P-201ENST00000472779 293 ntBASIC21.56■■□□□ 1.04
COL13A1Q5TAT6 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
COL13A1Q5TAT6 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC21.56■■□□□ 1.04
COL13A1Q5TAT6 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC21.56■■□□□ 1.04
COL13A1Q5TAT6 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC21.56■■□□□ 1.04
COL13A1Q5TAT6 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC21.56■■□□□ 1.04
COL13A1Q5TAT6 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC21.56■■□□□ 1.04
COL13A1Q5TAT6 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC21.56■■□□□ 1.04
COL13A1Q5TAT6 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
COL13A1Q5TAT6 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
COL13A1Q5TAT6 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
COL13A1Q5TAT6 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
COL13A1Q5TAT6 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
COL13A1Q5TAT6 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
COL13A1Q5TAT6 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
COL13A1Q5TAT6 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC21.55■■□□□ 1.04
COL13A1Q5TAT6 PRSS29P-201ENST00000440800 595 ntBASIC21.55■■□□□ 1.04
COL13A1Q5TAT6 ALG1L5P-201ENST00000482043 771 ntBASIC21.55■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms