Protein–RNA interactions for Protein: P61073

CXCR4, C-X-C chemokine receptor type 4, humanhuman

Predictions only

Length 352 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4P61073 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CXCR4P61073 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CXCR4P61073 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CXCR4P61073 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CXCR4P61073 AC008764.6-201ENST00000595909 2069 ntBASIC17.46■□□□□ 0.39
CXCR4P61073 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CXCR4P61073 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CXCR4P61073 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
CXCR4P61073 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC17.46■□□□□ 0.38
CXCR4P61073 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CXCR4P61073 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC17.45■□□□□ 0.38
CXCR4P61073 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC17.45■□□□□ 0.38
CXCR4P61073 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC17.45■□□□□ 0.38
CXCR4P61073 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CXCR4P61073 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CXCR4P61073 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CXCR4P61073 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CXCR4P61073 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC17.45■□□□□ 0.38
CXCR4P61073 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
CXCR4P61073 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC17.45■□□□□ 0.38
CXCR4P61073 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CXCR4P61073 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CXCR4P61073 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CXCR4P61073 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
CXCR4P61073 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CXCR4P61073 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
CXCR4P61073 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC17.45■□□□□ 0.38
CXCR4P61073 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CXCR4P61073 AC016769.1-201ENST00000409132 1010 ntBASIC17.45■□□□□ 0.38
CXCR4P61073 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
CXCR4P61073 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC17.45■□□□□ 0.38
CXCR4P61073 DUX4L16-201ENST00000555130 1264 ntBASIC17.45■□□□□ 0.38
CXCR4P61073 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC17.45■□□□□ 0.38
CXCR4P61073 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
CXCR4P61073 CYP2T3P-201ENST00000601990 817 ntBASIC17.45■□□□□ 0.38
CXCR4P61073 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CXCR4P61073 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC17.45■□□□□ 0.38
CXCR4P61073 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CXCR4P61073 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CXCR4P61073 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
CXCR4P61073 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CXCR4P61073 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CXCR4P61073 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
CXCR4P61073 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC17.45■□□□□ 0.38
CXCR4P61073 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CXCR4P61073 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC17.45■□□□□ 0.38
CXCR4P61073 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC17.45■□□□□ 0.38
CXCR4P61073 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CXCR4P61073 PRORSD1P-202ENST00000563365 2154 ntBASIC17.45■□□□□ 0.38
CXCR4P61073 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
CXCR4P61073 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CXCR4P61073 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CXCR4P61073 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
CXCR4P61073 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
CXCR4P61073 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CXCR4P61073 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC17.44■□□□□ 0.38
CXCR4P61073 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CXCR4P61073 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CXCR4P61073 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CXCR4P61073 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CXCR4P61073 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC17.44■□□□□ 0.38
CXCR4P61073 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC17.44■□□□□ 0.38
CXCR4P61073 PLD4-205ENST00000553861 667 ntTSL 2 BASIC17.44■□□□□ 0.38
CXCR4P61073 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC17.44■□□□□ 0.38
CXCR4P61073 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC17.44■□□□□ 0.38
CXCR4P61073 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC17.44■□□□□ 0.38
CXCR4P61073 BRWD1-AS2-201ENST00000603064 1028 ntBASIC17.44■□□□□ 0.38
CXCR4P61073 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
CXCR4P61073 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CXCR4P61073 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC17.44■□□□□ 0.38
CXCR4P61073 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
CXCR4P61073 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC17.44■□□□□ 0.38
CXCR4P61073 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC17.44■□□□□ 0.38
CXCR4P61073 AC116351.2-201ENST00000606540 1585 ntBASIC17.44■□□□□ 0.38
CXCR4P61073 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
CXCR4P61073 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CXCR4P61073 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC17.44■□□□□ 0.38
CXCR4P61073 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC17.44■□□□□ 0.38
CXCR4P61073 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
CXCR4P61073 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CXCR4P61073 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
CXCR4P61073 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CXCR4P61073 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC17.43■□□□□ 0.38
CXCR4P61073 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC17.43■□□□□ 0.38
CXCR4P61073 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CXCR4P61073 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC17.43■□□□□ 0.38
CXCR4P61073 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC17.43■□□□□ 0.38
CXCR4P61073 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
CXCR4P61073 UBQLN4P1-201ENST00000461599 1801 ntBASIC17.43■□□□□ 0.38
CXCR4P61073 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
CXCR4P61073 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
CXCR4P61073 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC17.43■□□□□ 0.38
CXCR4P61073 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC17.43■□□□□ 0.38
CXCR4P61073 AL355472.2-201ENST00000422958 438 ntBASIC17.43■□□□□ 0.38
CXCR4P61073 GXYLT1P2-201ENST00000433312 1230 ntBASIC17.43■□□□□ 0.38
CXCR4P61073 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC17.43■□□□□ 0.38
CXCR4P61073 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
CXCR4P61073 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC17.43■□□□□ 0.38
CXCR4P61073 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CXCR4P61073 AC069236.1-201ENST00000604339 616 ntBASIC17.43■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms