Protein–RNA interactions for Protein: P61011

SRP54, Signal recognition particle 54 kDa protein, humanhuman

Known RBP Predictions only

Length 504 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54P61011 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SRP54P61011 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
SRP54P61011 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SRP54P61011 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC18.88■□□□□ 0.61
SRP54P61011 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC18.88■□□□□ 0.61
SRP54P61011 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC18.88■□□□□ 0.61
SRP54P61011 AC104076.2-201ENST00000448912 469 ntBASIC18.88■□□□□ 0.61
SRP54P61011 CA15P1-201ENST00000481698 905 ntBASIC18.88■□□□□ 0.61
SRP54P61011 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
SRP54P61011 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC18.88■□□□□ 0.61
SRP54P61011 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC18.88■□□□□ 0.61
SRP54P61011 AL445228.2-201ENST00000605589 952 ntBASIC18.88■□□□□ 0.61
SRP54P61011 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC18.88■□□□□ 0.61
SRP54P61011 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SRP54P61011 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC18.88■□□□□ 0.61
SRP54P61011 KRT8P11-201ENST00000409686 1436 ntBASIC18.88■□□□□ 0.61
SRP54P61011 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SRP54P61011 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SRP54P61011 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SRP54P61011 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SRP54P61011 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC18.88■□□□□ 0.61
SRP54P61011 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC18.88■□□□□ 0.61
SRP54P61011 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SRP54P61011 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SRP54P61011 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SRP54P61011 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SRP54P61011 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SRP54P61011 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC18.87■□□□□ 0.61
SRP54P61011 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
SRP54P61011 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC18.87■□□□□ 0.61
SRP54P61011 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
SRP54P61011 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
SRP54P61011 KRT18P35-201ENST00000510488 1269 ntBASIC18.87■□□□□ 0.61
SRP54P61011 PRSS44-201ENST00000515154 1146 ntBASIC18.87■□□□□ 0.61
SRP54P61011 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC18.87■□□□□ 0.61
SRP54P61011 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC18.87■□□□□ 0.61
SRP54P61011 AL353719.1-201ENST00000566847 864 ntBASIC18.87■□□□□ 0.61
SRP54P61011 GPX4-207ENST00000589115 812 ntTSL 2 BASIC18.87■□□□□ 0.61
SRP54P61011 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
SRP54P61011 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SRP54P61011 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC18.87■□□□□ 0.61
SRP54P61011 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SRP54P61011 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
SRP54P61011 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SRP54P61011 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SRP54P61011 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC18.86■□□□□ 0.61
SRP54P61011 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC18.86■□□□□ 0.61
SRP54P61011 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SRP54P61011 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC18.86■□□□□ 0.61
SRP54P61011 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SRP54P61011 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC18.86■□□□□ 0.61
SRP54P61011 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
SRP54P61011 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
SRP54P61011 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC18.86■□□□□ 0.61
SRP54P61011 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
SRP54P61011 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
SRP54P61011 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
SRP54P61011 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC18.86■□□□□ 0.61
SRP54P61011 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC18.86■□□□□ 0.61
SRP54P61011 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
SRP54P61011 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
SRP54P61011 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SRP54P61011 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC18.86■□□□□ 0.61
SRP54P61011 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SRP54P61011 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC18.86■□□□□ 0.61
SRP54P61011 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
SRP54P61011 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SRP54P61011 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC18.86■□□□□ 0.61
SRP54P61011 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SRP54P61011 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC18.86■□□□□ 0.61
SRP54P61011 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SRP54P61011 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC18.85■□□□□ 0.61
SRP54P61011 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC18.85■□□□□ 0.61
SRP54P61011 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC18.85■□□□□ 0.61
SRP54P61011 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC18.85■□□□□ 0.61
SRP54P61011 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
SRP54P61011 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SRP54P61011 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SRP54P61011 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC18.85■□□□□ 0.61
SRP54P61011 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SRP54P61011 ARMC10P1-201ENST00000313754 855 ntBASIC18.85■□□□□ 0.61
SRP54P61011 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SRP54P61011 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC18.85■□□□□ 0.61
SRP54P61011 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SRP54P61011 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC18.85■□□□□ 0.61
SRP54P61011 DUX4L26-201ENST00000489078 1255 ntBASIC18.85■□□□□ 0.61
SRP54P61011 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC18.85■□□□□ 0.61
SRP54P61011 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC18.85■□□□□ 0.61
SRP54P61011 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC18.85■□□□□ 0.61
SRP54P61011 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
SRP54P61011 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SRP54P61011 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SRP54P61011 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC18.85■□□□□ 0.61
SRP54P61011 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SRP54P61011 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC18.85■□□□□ 0.61
SRP54P61011 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
SRP54P61011 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
SRP54P61011 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
SRP54P61011 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SRP54P61011 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms