Protein–RNA interactions for Protein: P53384

NUBP1, Cytosolic Fe-S cluster assembly factor NUBP1, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUBP1P53384 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
NUBP1P53384 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC19.07■□□□□ 0.64
NUBP1P53384 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC19.06■□□□□ 0.64
NUBP1P53384 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC19.06■□□□□ 0.64
NUBP1P53384 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
NUBP1P53384 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC19.06■□□□□ 0.64
NUBP1P53384 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC19.06■□□□□ 0.64
NUBP1P53384 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
NUBP1P53384 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC19.06■□□□□ 0.64
NUBP1P53384 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
NUBP1P53384 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
NUBP1P53384 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
NUBP1P53384 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
NUBP1P53384 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
NUBP1P53384 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC19.06■□□□□ 0.64
NUBP1P53384 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
NUBP1P53384 IGHV3-47-201ENST00000425060 335 ntBASIC19.06■□□□□ 0.64
NUBP1P53384 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC19.06■□□□□ 0.64
NUBP1P53384 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC19.06■□□□□ 0.64
NUBP1P53384 MOK-208ENST00000519058 917 ntTSL 2 BASIC19.06■□□□□ 0.64
NUBP1P53384 AF238378.1-201ENST00000526806 358 ntBASIC19.06■□□□□ 0.64
NUBP1P53384 KRT8P2-201ENST00000556193 944 ntBASIC19.06■□□□□ 0.64
NUBP1P53384 ETFRF1-207ENST00000556351 838 ntAPPRIS ALT1 TSL 2 BASIC19.06■□□□□ 0.64
NUBP1P53384 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
NUBP1P53384 IGHV3-41-201ENST00000613121 348 ntBASIC19.06■□□□□ 0.64
NUBP1P53384 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
NUBP1P53384 ABBA01031661.1-201ENST00000634362 1253 ntBASIC19.06■□□□□ 0.64
NUBP1P53384 AC083906.6-201ENST00000641366 219 ntBASIC19.06■□□□□ 0.64
NUBP1P53384 AC079781.4-201ENST00000641908 219 ntBASIC19.06■□□□□ 0.64
NUBP1P53384 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
NUBP1P53384 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
NUBP1P53384 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC19.06■□□□□ 0.64
NUBP1P53384 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
NUBP1P53384 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
NUBP1P53384 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
NUBP1P53384 AC022762.2-201ENST00000600308 1353 ntBASIC19.06■□□□□ 0.64
NUBP1P53384 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
NUBP1P53384 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC19.05■□□□□ 0.64
NUBP1P53384 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC19.05■□□□□ 0.64
NUBP1P53384 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
NUBP1P53384 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
NUBP1P53384 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
NUBP1P53384 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
NUBP1P53384 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
NUBP1P53384 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
NUBP1P53384 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
NUBP1P53384 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
NUBP1P53384 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC19.05■□□□□ 0.64
NUBP1P53384 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC19.05■□□□□ 0.64
NUBP1P53384 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC19.05■□□□□ 0.64
NUBP1P53384 RNF126P1-202ENST00000569893 925 ntBASIC19.05■□□□□ 0.64
NUBP1P53384 PIN1-206ENST00000587625 878 ntTSL 2 BASIC19.05■□□□□ 0.64
NUBP1P53384 AP000873.2-201ENST00000602381 406 ntTSL 2 BASIC19.05■□□□□ 0.64
NUBP1P53384 AC087521.4-201ENST00000637427 289 ntTSL 5 BASIC19.05■□□□□ 0.64
NUBP1P53384 C1orf229-201ENST00000623686 2258 ntBASIC19.05■□□□□ 0.64
NUBP1P53384 AC012676.1-201ENST00000574705 1949 ntBASIC19.05■□□□□ 0.64
NUBP1P53384 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
NUBP1P53384 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
NUBP1P53384 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
NUBP1P53384 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
NUBP1P53384 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC19.05■□□□□ 0.64
NUBP1P53384 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
NUBP1P53384 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC19.04■□□□□ 0.64
NUBP1P53384 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC19.04■□□□□ 0.64
NUBP1P53384 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
NUBP1P53384 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
NUBP1P53384 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
NUBP1P53384 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
NUBP1P53384 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
NUBP1P53384 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC19.04■□□□□ 0.64
NUBP1P53384 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC19.04■□□□□ 0.64
NUBP1P53384 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
NUBP1P53384 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
NUBP1P53384 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
NUBP1P53384 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
NUBP1P53384 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
NUBP1P53384 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
NUBP1P53384 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC19.04■□□□□ 0.64
NUBP1P53384 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC19.04■□□□□ 0.64
NUBP1P53384 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC19.04■□□□□ 0.64
NUBP1P53384 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
NUBP1P53384 SEC1P-202ENST00000473944 940 ntBASIC19.04■□□□□ 0.64
NUBP1P53384 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
NUBP1P53384 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC19.04■□□□□ 0.64
NUBP1P53384 MRPS36-204ENST00000512880 1200 ntTSL 5 BASIC19.04■□□□□ 0.64
NUBP1P53384 NDUFC1-211ENST00000544855 1257 ntAPPRIS P1 TSL 3 BASIC19.04■□□□□ 0.64
NUBP1P53384 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC19.04■□□□□ 0.64
NUBP1P53384 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC19.04■□□□□ 0.64
NUBP1P53384 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC19.04■□□□□ 0.64
NUBP1P53384 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC19.04■□□□□ 0.64
NUBP1P53384 MIR3917-201ENST00000580971 93 ntBASIC19.04■□□□□ 0.64
NUBP1P53384 MRPS36-205ENST00000602380 1200 ntTSL 2 BASIC19.04■□□□□ 0.64
NUBP1P53384 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC19.04■□□□□ 0.64
NUBP1P53384 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC19.04■□□□□ 0.64
NUBP1P53384 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC19.04■□□□□ 0.64
NUBP1P53384 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
NUBP1P53384 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
NUBP1P53384 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
NUBP1P53384 TBC1D3P2-202ENST00000577902 1649 ntBASIC19.03■□□□□ 0.64
NUBP1P53384 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms