Protein–RNA interactions for Protein: P49768

PSEN1, Presenilin-1, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1P49768 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
PSEN1P49768 AC073575.1-201ENST00000551125 596 ntTSL 3 BASIC20.3■□□□□ 0.84
PSEN1P49768 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC20.3■□□□□ 0.84
PSEN1P49768 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC20.3■□□□□ 0.84
PSEN1P49768 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC20.3■□□□□ 0.84
PSEN1P49768 ABBA01031674.1-201ENST00000635145 728 ntBASIC20.3■□□□□ 0.84
PSEN1P49768 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC20.3■□□□□ 0.84
PSEN1P49768 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
PSEN1P49768 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PSEN1P49768 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
PSEN1P49768 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC20.3■□□□□ 0.84
PSEN1P49768 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC20.3■□□□□ 0.84
PSEN1P49768 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PSEN1P49768 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC20.29■□□□□ 0.84
PSEN1P49768 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
PSEN1P49768 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
PSEN1P49768 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PSEN1P49768 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
PSEN1P49768 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
PSEN1P49768 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC20.29■□□□□ 0.84
PSEN1P49768 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC20.29■□□□□ 0.84
PSEN1P49768 AL160286.2-201ENST00000567150 934 ntBASIC20.29■□□□□ 0.84
PSEN1P49768 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PSEN1P49768 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PSEN1P49768 MIR6786-201ENST00000616843 113 ntBASIC20.29■□□□□ 0.84
PSEN1P49768 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC20.29■□□□□ 0.84
PSEN1P49768 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PSEN1P49768 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
PSEN1P49768 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PSEN1P49768 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC20.29■□□□□ 0.84
PSEN1P49768 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC20.28■□□□□ 0.84
PSEN1P49768 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
PSEN1P49768 ME2-218ENST00000640965 2476 ntTSL 5 BASIC20.28■□□□□ 0.84
PSEN1P49768 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
PSEN1P49768 FMC1-201ENST00000297534 1210 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PSEN1P49768 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
PSEN1P49768 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PSEN1P49768 RBM17P1-201ENST00000453646 1190 ntBASIC20.28■□□□□ 0.84
PSEN1P49768 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC20.28■□□□□ 0.84
PSEN1P49768 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC20.28■□□□□ 0.84
PSEN1P49768 GLRB-205ENST00000512619 728 ntTSL 3 BASIC20.28■□□□□ 0.84
PSEN1P49768 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC20.28■□□□□ 0.84
PSEN1P49768 AC092068.1-201ENST00000592525 454 ntTSL 2 BASIC20.28■□□□□ 0.84
PSEN1P49768 DGCR10-201ENST00000609839 495 ntBASIC20.28■□□□□ 0.84
PSEN1P49768 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
PSEN1P49768 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC20.28■□□□□ 0.84
PSEN1P49768 AC112907.3-201ENST00000577781 2400 ntBASIC20.28■□□□□ 0.84
PSEN1P49768 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PSEN1P49768 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC20.28■□□□□ 0.84
PSEN1P49768 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PSEN1P49768 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC20.28■□□□□ 0.84
PSEN1P49768 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PSEN1P49768 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
PSEN1P49768 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PSEN1P49768 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PSEN1P49768 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PSEN1P49768 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PSEN1P49768 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
PSEN1P49768 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PSEN1P49768 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC20.27■□□□□ 0.84
PSEN1P49768 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC20.27■□□□□ 0.84
PSEN1P49768 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PSEN1P49768 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC20.27■□□□□ 0.84
PSEN1P49768 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
PSEN1P49768 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
PSEN1P49768 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
PSEN1P49768 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC20.27■□□□□ 0.84
PSEN1P49768 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
PSEN1P49768 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC20.27■□□□□ 0.84
PSEN1P49768 KRTAP4-4-201ENST00000390661 1081 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
PSEN1P49768 B3GAT3P1-201ENST00000471720 806 ntBASIC20.27■□□□□ 0.84
PSEN1P49768 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC20.27■□□□□ 0.84
PSEN1P49768 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC20.27■□□□□ 0.84
PSEN1P49768 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC20.27■□□□□ 0.84
PSEN1P49768 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
PSEN1P49768 NEFHP1-201ENST00000412845 2629 ntBASIC20.27■□□□□ 0.84
PSEN1P49768 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PSEN1P49768 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC20.27■□□□□ 0.84
PSEN1P49768 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
PSEN1P49768 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC20.27■□□□□ 0.83
PSEN1P49768 ANKRD18DP-204ENST00000455355 1975 ntBASIC20.26■□□□□ 0.83
PSEN1P49768 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
PSEN1P49768 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC20.26■□□□□ 0.83
PSEN1P49768 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
PSEN1P49768 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC20.26■□□□□ 0.83
PSEN1P49768 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
PSEN1P49768 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
PSEN1P49768 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC20.26■□□□□ 0.83
PSEN1P49768 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PSEN1P49768 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PSEN1P49768 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC20.26■□□□□ 0.83
PSEN1P49768 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC20.26■□□□□ 0.83
PSEN1P49768 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC20.26■□□□□ 0.83
PSEN1P49768 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC20.26■□□□□ 0.83
PSEN1P49768 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
PSEN1P49768 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PSEN1P49768 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PSEN1P49768 PCDHAC2-203ENST00000615316 3011 ntBASIC20.26■□□□□ 0.83
PSEN1P49768 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC20.26■□□□□ 0.83
PSEN1P49768 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms