Protein–RNA interactions for Protein: P40939

HADHA, Trifunctional enzyme subunit alpha, mitochondrial, humanhuman

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHAP40939 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
HADHAP40939 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
HADHAP40939 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
HADHAP40939 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
HADHAP40939 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
HADHAP40939 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
HADHAP40939 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC19.37■□□□□ 0.69
HADHAP40939 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC19.37■□□□□ 0.69
HADHAP40939 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC19.37■□□□□ 0.69
HADHAP40939 AC066615.1-201ENST00000640911 628 ntBASIC19.37■□□□□ 0.69
HADHAP40939 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC19.37■□□□□ 0.69
HADHAP40939 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
HADHAP40939 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
HADHAP40939 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
HADHAP40939 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC19.37■□□□□ 0.69
HADHAP40939 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
HADHAP40939 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
HADHAP40939 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
HADHAP40939 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC19.36■□□□□ 0.69
HADHAP40939 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC19.36■□□□□ 0.69
HADHAP40939 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
HADHAP40939 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC19.36■□□□□ 0.69
HADHAP40939 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
HADHAP40939 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
HADHAP40939 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
HADHAP40939 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC19.36■□□□□ 0.69
HADHAP40939 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
HADHAP40939 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC19.36■□□□□ 0.69
HADHAP40939 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
HADHAP40939 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC19.36■□□□□ 0.69
HADHAP40939 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC19.36■□□□□ 0.69
HADHAP40939 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
HADHAP40939 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC19.36■□□□□ 0.69
HADHAP40939 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
HADHAP40939 FAM197Y4-202ENST00000622692 608 ntBASIC19.36■□□□□ 0.69
HADHAP40939 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC19.36■□□□□ 0.69
HADHAP40939 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
HADHAP40939 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
HADHAP40939 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC19.36■□□□□ 0.69
HADHAP40939 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC19.36■□□□□ 0.69
HADHAP40939 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
HADHAP40939 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
HADHAP40939 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC19.36■□□□□ 0.69
HADHAP40939 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC19.36■□□□□ 0.69
HADHAP40939 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC19.36■□□□□ 0.69
HADHAP40939 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
HADHAP40939 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
HADHAP40939 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
HADHAP40939 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
HADHAP40939 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC19.35■□□□□ 0.69
HADHAP40939 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
HADHAP40939 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
HADHAP40939 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
HADHAP40939 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
HADHAP40939 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
HADHAP40939 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
HADHAP40939 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.35■□□□□ 0.69
HADHAP40939 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
HADHAP40939 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
HADHAP40939 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.35■□□□□ 0.69
HADHAP40939 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.35■□□□□ 0.69
HADHAP40939 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
HADHAP40939 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
HADHAP40939 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
HADHAP40939 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
HADHAP40939 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
HADHAP40939 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC19.35■□□□□ 0.69
HADHAP40939 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
HADHAP40939 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
HADHAP40939 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC19.34■□□□□ 0.69
HADHAP40939 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
HADHAP40939 AC104417.2-201ENST00000562989 1793 ntBASIC19.34■□□□□ 0.69
HADHAP40939 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC19.34■□□□□ 0.69
HADHAP40939 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
HADHAP40939 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
HADHAP40939 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC19.34■□□□□ 0.69
HADHAP40939 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
HADHAP40939 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
HADHAP40939 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
HADHAP40939 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
HADHAP40939 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC19.34■□□□□ 0.69
HADHAP40939 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC19.34■□□□□ 0.69
HADHAP40939 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC19.34■□□□□ 0.69
HADHAP40939 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC19.34■□□□□ 0.69
HADHAP40939 AL359736.2-201ENST00000621992 437 ntBASIC19.34■□□□□ 0.69
HADHAP40939 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC19.34■□□□□ 0.69
HADHAP40939 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
HADHAP40939 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
HADHAP40939 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
HADHAP40939 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
HADHAP40939 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC19.34■□□□□ 0.69
HADHAP40939 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
HADHAP40939 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
HADHAP40939 AL138781.2-201ENST00000617896 1843 ntBASIC19.34■□□□□ 0.69
HADHAP40939 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
HADHAP40939 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
HADHAP40939 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC19.34■□□□□ 0.69
HADHAP40939 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC19.34■□□□□ 0.69
HADHAP40939 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
HADHAP40939 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms