Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
HMGCLP35914 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
HMGCLP35914 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
HMGCLP35914 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
HMGCLP35914 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC19.09■□□□□ 0.65
HMGCLP35914 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
HMGCLP35914 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC19.09■□□□□ 0.65
HMGCLP35914 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
HMGCLP35914 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
HMGCLP35914 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
HMGCLP35914 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
HMGCLP35914 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC19.09■□□□□ 0.65
HMGCLP35914 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
HMGCLP35914 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
HMGCLP35914 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.65
HMGCLP35914 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC19.08■□□□□ 0.65
HMGCLP35914 AC096733.2-201ENST00000609937 1394 ntBASIC19.08■□□□□ 0.65
HMGCLP35914 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC19.08■□□□□ 0.65
HMGCLP35914 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC19.08■□□□□ 0.65
HMGCLP35914 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC19.08■□□□□ 0.65
HMGCLP35914 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
HMGCLP35914 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
HMGCLP35914 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC19.08■□□□□ 0.65
HMGCLP35914 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
HMGCLP35914 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
HMGCLP35914 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC19.08■□□□□ 0.64
HMGCLP35914 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
HMGCLP35914 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC19.08■□□□□ 0.64
HMGCLP35914 UBQLN4P1-201ENST00000461599 1801 ntBASIC19.08■□□□□ 0.64
HMGCLP35914 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
HMGCLP35914 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
HMGCLP35914 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
HMGCLP35914 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC19.08■□□□□ 0.64
HMGCLP35914 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
HMGCLP35914 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
HMGCLP35914 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC19.08■□□□□ 0.64
HMGCLP35914 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC19.08■□□□□ 0.64
HMGCLP35914 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
HMGCLP35914 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
HMGCLP35914 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
HMGCLP35914 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
HMGCLP35914 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
HMGCLP35914 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
HMGCLP35914 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
HMGCLP35914 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
HMGCLP35914 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
HMGCLP35914 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
HMGCLP35914 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
HMGCLP35914 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
HMGCLP35914 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
HMGCLP35914 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
HMGCLP35914 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
HMGCLP35914 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
HMGCLP35914 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC19.07■□□□□ 0.64
HMGCLP35914 AL596275.1-201ENST00000423464 877 ntBASIC19.07■□□□□ 0.64
HMGCLP35914 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
HMGCLP35914 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
HMGCLP35914 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
HMGCLP35914 CKBP1-201ENST00000565489 1086 ntBASIC19.07■□□□□ 0.64
HMGCLP35914 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
HMGCLP35914 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC19.07■□□□□ 0.64
HMGCLP35914 SNX21-213ENST00000614929 587 ntTSL 5 BASIC19.07■□□□□ 0.64
HMGCLP35914 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC19.07■□□□□ 0.64
HMGCLP35914 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
HMGCLP35914 AL161938.1-201ENST00000569833 2180 ntBASIC19.07■□□□□ 0.64
HMGCLP35914 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
HMGCLP35914 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC19.07■□□□□ 0.64
HMGCLP35914 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
HMGCLP35914 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC19.07■□□□□ 0.64
HMGCLP35914 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC19.07■□□□□ 0.64
HMGCLP35914 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
HMGCLP35914 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC19.06■□□□□ 0.64
HMGCLP35914 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC19.06■□□□□ 0.64
HMGCLP35914 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
HMGCLP35914 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
HMGCLP35914 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC19.06■□□□□ 0.64
HMGCLP35914 UNC93B2-201ENST00000285383 730 ntBASIC19.06■□□□□ 0.64
HMGCLP35914 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
HMGCLP35914 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
HMGCLP35914 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC19.06■□□□□ 0.64
HMGCLP35914 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC19.06■□□□□ 0.64
HMGCLP35914 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC19.06■□□□□ 0.64
HMGCLP35914 RBM17P1-201ENST00000453646 1190 ntBASIC19.06■□□□□ 0.64
HMGCLP35914 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC19.06■□□□□ 0.64
HMGCLP35914 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
HMGCLP35914 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC19.06■□□□□ 0.64
HMGCLP35914 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC19.06■□□□□ 0.64
HMGCLP35914 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC19.06■□□□□ 0.64
HMGCLP35914 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC19.06■□□□□ 0.64
HMGCLP35914 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC19.06■□□□□ 0.64
HMGCLP35914 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC19.06■□□□□ 0.64
HMGCLP35914 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
HMGCLP35914 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC19.06■□□□□ 0.64
HMGCLP35914 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
HMGCLP35914 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
HMGCLP35914 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC19.06■□□□□ 0.64
HMGCLP35914 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
HMGCLP35914 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
HMGCLP35914 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
HMGCLP35914 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms