Protein–RNA interactions for Protein: P25391

LAMA1, Laminin subunit alpha-1, humanhuman

Predictions only

Length 3,075 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA1P25391 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC18.77■□□□□ 0.59
LAMA1P25391 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.59
LAMA1P25391 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
LAMA1P25391 LINC00167-201ENST00000530583 1419 ntBASIC18.76■□□□□ 0.59
LAMA1P25391 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC18.76■□□□□ 0.59
LAMA1P25391 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC18.76■□□□□ 0.59
LAMA1P25391 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
LAMA1P25391 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
LAMA1P25391 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
LAMA1P25391 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC18.76■□□□□ 0.59
LAMA1P25391 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC18.76■□□□□ 0.59
LAMA1P25391 AP005212.1-201ENST00000581547 1997 ntBASIC18.76■□□□□ 0.59
LAMA1P25391 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
LAMA1P25391 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC18.76■□□□□ 0.59
LAMA1P25391 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC18.76■□□□□ 0.59
LAMA1P25391 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC18.76■□□□□ 0.59
LAMA1P25391 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
LAMA1P25391 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
LAMA1P25391 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC18.76■□□□□ 0.59
LAMA1P25391 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC18.76■□□□□ 0.59
LAMA1P25391 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC18.76■□□□□ 0.59
LAMA1P25391 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
LAMA1P25391 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
LAMA1P25391 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
LAMA1P25391 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
LAMA1P25391 AC012676.1-201ENST00000574705 1949 ntBASIC18.75■□□□□ 0.59
LAMA1P25391 PHB2-202ENST00000440277 996 ntTSL 5 BASIC18.75■□□□□ 0.59
LAMA1P25391 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
LAMA1P25391 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC18.75■□□□□ 0.59
LAMA1P25391 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
LAMA1P25391 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC18.75■□□□□ 0.59
LAMA1P25391 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC18.75■□□□□ 0.59
LAMA1P25391 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
LAMA1P25391 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
LAMA1P25391 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
LAMA1P25391 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC18.75■□□□□ 0.59
LAMA1P25391 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
LAMA1P25391 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC18.75■□□□□ 0.59
LAMA1P25391 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC18.75■□□□□ 0.59
LAMA1P25391 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC18.75■□□□□ 0.59
LAMA1P25391 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
LAMA1P25391 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
LAMA1P25391 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
LAMA1P25391 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
LAMA1P25391 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
LAMA1P25391 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
LAMA1P25391 TSPY12P-201ENST00000421279 868 ntBASIC18.75■□□□□ 0.59
LAMA1P25391 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC18.75■□□□□ 0.59
LAMA1P25391 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC18.75■□□□□ 0.59
LAMA1P25391 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC18.75■□□□□ 0.59
LAMA1P25391 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC18.75■□□□□ 0.59
LAMA1P25391 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
LAMA1P25391 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
LAMA1P25391 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
LAMA1P25391 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
LAMA1P25391 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC18.74■□□□□ 0.59
LAMA1P25391 AC079781.3-201ENST00000449110 356 ntBASIC18.74■□□□□ 0.59
LAMA1P25391 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
LAMA1P25391 SLC25A6P4-201ENST00000586535 553 ntBASIC18.74■□□□□ 0.59
LAMA1P25391 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC18.74■□□□□ 0.59
LAMA1P25391 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
LAMA1P25391 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
LAMA1P25391 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
LAMA1P25391 AC092720.2-201ENST00000602388 1665 ntBASIC18.74■□□□□ 0.59
LAMA1P25391 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
LAMA1P25391 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
LAMA1P25391 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC18.74■□□□□ 0.59
LAMA1P25391 MIR4674-201ENST00000582457 87 ntBASIC18.74■□□□□ 0.59
LAMA1P25391 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC18.74■□□□□ 0.59
LAMA1P25391 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC18.74■□□□□ 0.59
LAMA1P25391 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
LAMA1P25391 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
LAMA1P25391 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC18.73■□□□□ 0.59
LAMA1P25391 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
LAMA1P25391 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC18.73■□□□□ 0.59
LAMA1P25391 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC18.73■□□□□ 0.59
LAMA1P25391 AC034232.1-201ENST00000506026 1064 ntBASIC18.73■□□□□ 0.59
LAMA1P25391 KRT18P1-202ENST00000452408 1331 ntBASIC18.73■□□□□ 0.59
LAMA1P25391 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC18.73■□□□□ 0.59
LAMA1P25391 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
LAMA1P25391 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
LAMA1P25391 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC18.73■□□□□ 0.59
LAMA1P25391 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
LAMA1P25391 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
LAMA1P25391 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
LAMA1P25391 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC18.73■□□□□ 0.59
LAMA1P25391 RASA4DP-201ENST00000460726 1199 ntBASIC18.73■□□□□ 0.59
LAMA1P25391 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
LAMA1P25391 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
LAMA1P25391 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC18.73■□□□□ 0.59
LAMA1P25391 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
LAMA1P25391 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
LAMA1P25391 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
LAMA1P25391 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
LAMA1P25391 GOLGA6L5P-202ENST00000515341 1828 ntBASIC18.73■□□□□ 0.59
LAMA1P25391 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
LAMA1P25391 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC18.73■□□□□ 0.59
LAMA1P25391 GPAT2P1-201ENST00000444924 1672 ntBASIC18.73■□□□□ 0.59
LAMA1P25391 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC18.72■□□□□ 0.59
LAMA1P25391 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC18.72■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms