Protein–RNA interactions for Protein: P25054

APC, Adenomatous polyposis coli protein, humanhuman

Predictions only

Length 2,843 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APCP25054 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC16.14■□□□□ 0.17
APCP25054 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC16.14■□□□□ 0.17
APCP25054 AP005901.3-202ENST00000581653 237 ntBASIC16.14■□□□□ 0.17
APCP25054 AC010327.4-202ENST00000591484 748 ntBASIC16.14■□□□□ 0.17
APCP25054 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
APCP25054 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC16.14■□□□□ 0.17
APCP25054 AC079602.3-201ENST00000623931 403 ntBASIC16.14■□□□□ 0.17
APCP25054 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
APCP25054 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
APCP25054 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
APCP25054 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC16.14■□□□□ 0.17
APCP25054 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC16.14■□□□□ 0.17
APCP25054 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
APCP25054 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
APCP25054 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
APCP25054 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
APCP25054 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
APCP25054 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
APCP25054 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC16.14■□□□□ 0.17
APCP25054 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
APCP25054 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC16.14■□□□□ 0.17
APCP25054 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC16.14■□□□□ 0.17
APCP25054 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
APCP25054 Z69720.1-201ENST00000601483 472 ntBASIC16.14■□□□□ 0.17
APCP25054 AC027601.4-201ENST00000611259 610 ntBASIC16.14■□□□□ 0.17
APCP25054 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC16.14■□□□□ 0.17
APCP25054 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
APCP25054 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
APCP25054 FEM1AP1-201ENST00000431297 1995 ntBASIC16.14■□□□□ 0.17
APCP25054 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
APCP25054 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
APCP25054 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC16.14■□□□□ 0.17
APCP25054 BUB3-202ENST00000368859 667 ntTSL 3 BASIC16.14■□□□□ 0.17
APCP25054 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
APCP25054 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC16.14■□□□□ 0.17
APCP25054 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC16.14■□□□□ 0.17
APCP25054 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC16.14■□□□□ 0.17
APCP25054 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC16.13■□□□□ 0.17
APCP25054 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
APCP25054 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
APCP25054 AF106564.1-201ENST00000607058 2553 ntBASIC16.13■□□□□ 0.17
APCP25054 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
APCP25054 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
APCP25054 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC16.13■□□□□ 0.17
APCP25054 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
APCP25054 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
APCP25054 AC099336.1-202ENST00000602961 463 ntBASIC16.13■□□□□ 0.17
APCP25054 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
APCP25054 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
APCP25054 URGCP-206ENST00000446958 365 ntTSL 2 BASIC16.13■□□□□ 0.17
APCP25054 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
APCP25054 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
APCP25054 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
APCP25054 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
APCP25054 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
APCP25054 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC16.12■□□□□ 0.17
APCP25054 AC018712.1-201ENST00000455767 687 ntBASIC16.12■□□□□ 0.17
APCP25054 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC16.12■□□□□ 0.17
APCP25054 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC16.12■□□□□ 0.17
APCP25054 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
APCP25054 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
APCP25054 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
APCP25054 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
APCP25054 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
APCP25054 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
APCP25054 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
APCP25054 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
APCP25054 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC16.12■□□□□ 0.17
APCP25054 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
APCP25054 AF186996.4-201ENST00000467186 377 ntBASIC16.12■□□□□ 0.17
APCP25054 AC073648.2-201ENST00000510116 352 ntBASIC16.12■□□□□ 0.17
APCP25054 IGHV3-22-201ENST00000520721 359 ntBASIC16.12■□□□□ 0.17
APCP25054 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC16.12■□□□□ 0.17
APCP25054 AC090616.6-201ENST00000582640 721 ntBASIC16.12■□□□□ 0.17
APCP25054 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC16.12■□□□□ 0.17
APCP25054 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC16.12■□□□□ 0.17
APCP25054 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC16.12■□□□□ 0.17
APCP25054 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
APCP25054 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
APCP25054 LBH-204ENST00000406087 559 ntTSL 4 BASIC16.11■□□□□ 0.17
APCP25054 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC16.11■□□□□ 0.17
APCP25054 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
APCP25054 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
APCP25054 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC16.11■□□□□ 0.17
APCP25054 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC16.11■□□□□ 0.17
APCP25054 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
APCP25054 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC16.11■□□□□ 0.17
APCP25054 CCNC-219ENST00000627680 896 ntTSL 5 BASIC16.11■□□□□ 0.17
APCP25054 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
APCP25054 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
APCP25054 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC16.11■□□□□ 0.17
APCP25054 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
APCP25054 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC16.11■□□□□ 0.17
APCP25054 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
APCP25054 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
APCP25054 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
APCP25054 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC16.11■□□□□ 0.17
APCP25054 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
APCP25054 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
APCP25054 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms