Protein–RNA interactions for Protein: P13611

VCAN, Versican core protein, humanhuman

Predictions only

Length 3,396 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCANP13611 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
VCANP13611 MIR662-201ENST00000384847 95 ntBASIC19.84■□□□□ 0.77
VCANP13611 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
VCANP13611 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC19.84■□□□□ 0.77
VCANP13611 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC19.84■□□□□ 0.77
VCANP13611 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
VCANP13611 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC19.84■□□□□ 0.77
VCANP13611 CD63-204ENST00000546939 779 ntTSL 3 BASIC19.84■□□□□ 0.77
VCANP13611 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC19.84■□□□□ 0.77
VCANP13611 ORC5-208ENST00000626700 344 ntTSL 3 BASIC19.84■□□□□ 0.77
VCANP13611 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
VCANP13611 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
VCANP13611 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
VCANP13611 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
VCANP13611 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
VCANP13611 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC19.84■□□□□ 0.77
VCANP13611 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC19.84■□□□□ 0.77
VCANP13611 MIR3687-2-201ENST00000577708 61 ntBASIC19.84■□□□□ 0.77
VCANP13611 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC19.84■□□□□ 0.77
VCANP13611 MIR3687-1-201ENST00000614492 61 ntBASIC19.84■□□□□ 0.77
VCANP13611 CCNC-219ENST00000627680 896 ntTSL 5 BASIC19.84■□□□□ 0.77
VCANP13611 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
VCANP13611 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC19.83■□□□□ 0.77
VCANP13611 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
VCANP13611 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC19.83■□□□□ 0.77
VCANP13611 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC19.83■□□□□ 0.77
VCANP13611 MIR4674-201ENST00000582457 87 ntBASIC19.83■□□□□ 0.77
VCANP13611 AC092364.2-202ENST00000597012 1073 ntBASIC19.83■□□□□ 0.77
VCANP13611 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC19.83■□□□□ 0.77
VCANP13611 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
VCANP13611 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC19.83■□□□□ 0.77
VCANP13611 CSF3-203ENST00000394148 622 ntTSL 3 BASIC19.83■□□□□ 0.76
VCANP13611 DERL1-203ENST00000419562 918 ntTSL 2 BASIC19.83■□□□□ 0.76
VCANP13611 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC19.83■□□□□ 0.76
VCANP13611 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC19.83■□□□□ 0.76
VCANP13611 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.76
VCANP13611 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
VCANP13611 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC19.83■□□□□ 0.76
VCANP13611 AC083906.6-201ENST00000641366 219 ntBASIC19.83■□□□□ 0.76
VCANP13611 AC079781.4-201ENST00000641908 219 ntBASIC19.83■□□□□ 0.76
VCANP13611 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
VCANP13611 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
VCANP13611 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC19.83■□□□□ 0.76
VCANP13611 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
VCANP13611 AC007274.1-201ENST00000439805 662 ntBASIC19.83■□□□□ 0.76
VCANP13611 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.76
VCANP13611 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
VCANP13611 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
VCANP13611 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
VCANP13611 COA5-202ENST00000409997 557 ntTSL 4 BASIC19.82■□□□□ 0.76
VCANP13611 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC19.82■□□□□ 0.76
VCANP13611 DHDH-204ENST00000523250 634 ntTSL 5 BASIC19.82■□□□□ 0.76
VCANP13611 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC19.82■□□□□ 0.76
VCANP13611 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC19.82■□□□□ 0.76
VCANP13611 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
VCANP13611 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC19.82■□□□□ 0.76
VCANP13611 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
VCANP13611 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
VCANP13611 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
VCANP13611 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
VCANP13611 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
VCANP13611 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
VCANP13611 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC19.82■□□□□ 0.76
VCANP13611 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
VCANP13611 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC19.82■□□□□ 0.76
VCANP13611 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC19.82■□□□□ 0.76
VCANP13611 FICD-205ENST00000552758 603 ntTSL 2 BASIC19.82■□□□□ 0.76
VCANP13611 AC116407.3-201ENST00000623905 1129 ntBASIC19.82■□□□□ 0.76
VCANP13611 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
VCANP13611 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC19.82■□□□□ 0.76
VCANP13611 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC19.82■□□□□ 0.76
VCANP13611 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
VCANP13611 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
VCANP13611 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
VCANP13611 MED15P5-201ENST00000423150 992 ntBASIC19.81■□□□□ 0.76
VCANP13611 METTL21AP1-201ENST00000438852 635 ntBASIC19.81■□□□□ 0.76
VCANP13611 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
VCANP13611 SPEG-225ENST00000617028 815 ntTSL 5 BASIC19.81■□□□□ 0.76
VCANP13611 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
VCANP13611 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
VCANP13611 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
VCANP13611 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC19.81■□□□□ 0.76
VCANP13611 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC19.81■□□□□ 0.76
VCANP13611 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC19.81■□□□□ 0.76
VCANP13611 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
VCANP13611 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
VCANP13611 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
VCANP13611 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
VCANP13611 YBX2P1-201ENST00000394192 760 ntBASIC19.81■□□□□ 0.76
VCANP13611 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC19.81■□□□□ 0.76
VCANP13611 DDT-203ENST00000403754 569 ntTSL 3 BASIC19.81■□□□□ 0.76
VCANP13611 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC19.81■□□□□ 0.76
VCANP13611 AF186996.4-201ENST00000467186 377 ntBASIC19.81■□□□□ 0.76
VCANP13611 AC112482.1-201ENST00000492080 688 ntBASIC19.81■□□□□ 0.76
VCANP13611 AC012645.4-201ENST00000610691 1061 ntBASIC19.81■□□□□ 0.76
VCANP13611 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
VCANP13611 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
VCANP13611 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
VCANP13611 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC19.81■□□□□ 0.76
VCANP13611 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC19.8■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms