Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CHRNA1P02708 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
CHRNA1P02708 TSPY21P-201ENST00000433481 731 ntBASIC20.86■□□□□ 0.93
CHRNA1P02708 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
CHRNA1P02708 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC20.86■□□□□ 0.93
CHRNA1P02708 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC20.86■□□□□ 0.93
CHRNA1P02708 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC20.86■□□□□ 0.93
CHRNA1P02708 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CHRNA1P02708 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CHRNA1P02708 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CHRNA1P02708 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
CHRNA1P02708 LINC01311-201ENST00000565162 1445 ntBASIC20.86■□□□□ 0.93
CHRNA1P02708 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
CHRNA1P02708 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC20.85■□□□□ 0.93
CHRNA1P02708 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC20.85■□□□□ 0.93
CHRNA1P02708 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC20.85■□□□□ 0.93
CHRNA1P02708 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CHRNA1P02708 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC20.85■□□□□ 0.93
CHRNA1P02708 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CHRNA1P02708 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC20.85■□□□□ 0.93
CHRNA1P02708 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CHRNA1P02708 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC20.85■□□□□ 0.93
CHRNA1P02708 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CHRNA1P02708 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CHRNA1P02708 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CHRNA1P02708 GAD2-202ENST00000376248 680 ntTSL 5 BASIC20.85■□□□□ 0.93
CHRNA1P02708 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CHRNA1P02708 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC20.85■□□□□ 0.93
CHRNA1P02708 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CHRNA1P02708 KRT126P-201ENST00000549467 1181 ntBASIC20.85■□□□□ 0.93
CHRNA1P02708 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC20.85■□□□□ 0.93
CHRNA1P02708 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CHRNA1P02708 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC20.85■□□□□ 0.93
CHRNA1P02708 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CHRNA1P02708 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
CHRNA1P02708 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CHRNA1P02708 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
CHRNA1P02708 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
CHRNA1P02708 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC20.84■□□□□ 0.93
CHRNA1P02708 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC20.84■□□□□ 0.93
CHRNA1P02708 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CHRNA1P02708 GPAT2P1-201ENST00000444924 1672 ntBASIC20.84■□□□□ 0.93
CHRNA1P02708 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CHRNA1P02708 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CHRNA1P02708 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
CHRNA1P02708 SPDYE13P-201ENST00000445314 798 ntBASIC20.84■□□□□ 0.93
CHRNA1P02708 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC20.84■□□□□ 0.93
CHRNA1P02708 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC20.84■□□□□ 0.93
CHRNA1P02708 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC20.84■□□□□ 0.93
CHRNA1P02708 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CHRNA1P02708 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CHRNA1P02708 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC20.84■□□□□ 0.93
CHRNA1P02708 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CHRNA1P02708 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
CHRNA1P02708 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
CHRNA1P02708 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
CHRNA1P02708 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC20.83■□□□□ 0.93
CHRNA1P02708 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC20.83■□□□□ 0.93
CHRNA1P02708 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC20.83■□□□□ 0.93
CHRNA1P02708 KRT18P48-201ENST00000434763 852 ntBASIC20.83■□□□□ 0.93
CHRNA1P02708 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC20.83■□□□□ 0.93
CHRNA1P02708 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC20.83■□□□□ 0.93
CHRNA1P02708 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC20.83■□□□□ 0.93
CHRNA1P02708 AC069148.1-201ENST00000608741 768 ntBASIC20.83■□□□□ 0.93
CHRNA1P02708 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CHRNA1P02708 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
CHRNA1P02708 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
CHRNA1P02708 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
CHRNA1P02708 GOLGA6L5P-202ENST00000515341 1828 ntBASIC20.83■□□□□ 0.92
CHRNA1P02708 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CHRNA1P02708 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
CHRNA1P02708 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CHRNA1P02708 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
CHRNA1P02708 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC20.82■□□□□ 0.92
CHRNA1P02708 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CHRNA1P02708 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CHRNA1P02708 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC20.82■□□□□ 0.92
CHRNA1P02708 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC20.82■□□□□ 0.92
CHRNA1P02708 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
CHRNA1P02708 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC20.82■□□□□ 0.92
CHRNA1P02708 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC20.82■□□□□ 0.92
CHRNA1P02708 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC20.82■□□□□ 0.92
CHRNA1P02708 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CHRNA1P02708 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
CHRNA1P02708 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
CHRNA1P02708 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC20.82■□□□□ 0.92
CHRNA1P02708 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CHRNA1P02708 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
CHRNA1P02708 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CHRNA1P02708 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CHRNA1P02708 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CHRNA1P02708 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CHRNA1P02708 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CHRNA1P02708 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CHRNA1P02708 DUSP5P1-201ENST00000441325 1139 ntBASIC20.81■□□□□ 0.92
CHRNA1P02708 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC20.81■□□□□ 0.92
CHRNA1P02708 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CHRNA1P02708 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC20.81■□□□□ 0.92
CHRNA1P02708 AL121894.2-201ENST00000602977 491 ntBASIC20.81■□□□□ 0.92
CHRNA1P02708 FGF14-AS2-201ENST00000606448 1074 ntBASIC20.81■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms