Protein–RNA interactions for Protein: O43933

PEX1, Peroxisome biogenesis factor 1, humanhuman

Predictions only

Length 1,283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX1O43933 C2orf69P4-201ENST00000565394 541 ntBASIC18.64■□□□□ 0.57
PEX1O43933 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC18.64■□□□□ 0.57
PEX1O43933 AC066615.1-201ENST00000640911 628 ntBASIC18.64■□□□□ 0.57
PEX1O43933 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PEX1O43933 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PEX1O43933 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC18.64■□□□□ 0.57
PEX1O43933 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PEX1O43933 CRK-204ENST00000574295 1391 ntTSL 5 BASIC18.64■□□□□ 0.57
PEX1O43933 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC18.64■□□□□ 0.57
PEX1O43933 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC18.64■□□□□ 0.57
PEX1O43933 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
PEX1O43933 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PEX1O43933 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PEX1O43933 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC18.63■□□□□ 0.57
PEX1O43933 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
PEX1O43933 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC18.63■□□□□ 0.57
PEX1O43933 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC18.63■□□□□ 0.57
PEX1O43933 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PEX1O43933 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC18.63■□□□□ 0.57
PEX1O43933 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC18.63■□□□□ 0.57
PEX1O43933 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC18.63■□□□□ 0.57
PEX1O43933 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
PEX1O43933 AC128676.1-201ENST00000454392 318 ntBASIC18.63■□□□□ 0.57
PEX1O43933 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PEX1O43933 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC18.63■□□□□ 0.57
PEX1O43933 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PEX1O43933 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PEX1O43933 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PEX1O43933 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PEX1O43933 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PEX1O43933 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
PEX1O43933 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PEX1O43933 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PEX1O43933 BICD1-207ENST00000551848 1962 ntBASIC18.62■□□□□ 0.57
PEX1O43933 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PEX1O43933 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PEX1O43933 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PEX1O43933 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC18.62■□□□□ 0.57
PEX1O43933 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PEX1O43933 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
PEX1O43933 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC18.62■□□□□ 0.57
PEX1O43933 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC18.62■□□□□ 0.57
PEX1O43933 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
PEX1O43933 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PEX1O43933 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PEX1O43933 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PEX1O43933 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PEX1O43933 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
PEX1O43933 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC18.62■□□□□ 0.57
PEX1O43933 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
PEX1O43933 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
PEX1O43933 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC18.62■□□□□ 0.57
PEX1O43933 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC18.62■□□□□ 0.57
PEX1O43933 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PEX1O43933 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
PEX1O43933 AL356652.1-201ENST00000615962 565 ntBASIC18.62■□□□□ 0.57
PEX1O43933 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
PEX1O43933 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC18.62■□□□□ 0.57
PEX1O43933 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC18.62■□□□□ 0.57
PEX1O43933 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PEX1O43933 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PEX1O43933 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PEX1O43933 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
PEX1O43933 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PEX1O43933 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
PEX1O43933 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC18.62■□□□□ 0.57
PEX1O43933 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
PEX1O43933 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC18.62■□□□□ 0.57
PEX1O43933 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PEX1O43933 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PEX1O43933 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
PEX1O43933 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
PEX1O43933 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
PEX1O43933 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC18.61■□□□□ 0.57
PEX1O43933 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC18.61■□□□□ 0.57
PEX1O43933 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PEX1O43933 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PEX1O43933 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
PEX1O43933 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC18.61■□□□□ 0.57
PEX1O43933 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PEX1O43933 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
PEX1O43933 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
PEX1O43933 AL354751.1-201ENST00000412768 1863 ntBASIC18.61■□□□□ 0.57
PEX1O43933 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PEX1O43933 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC18.61■□□□□ 0.57
PEX1O43933 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
PEX1O43933 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PEX1O43933 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC18.61■□□□□ 0.57
PEX1O43933 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC18.61■□□□□ 0.57
PEX1O43933 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
PEX1O43933 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
PEX1O43933 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
PEX1O43933 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PEX1O43933 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
PEX1O43933 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC18.6■□□□□ 0.57
PEX1O43933 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PEX1O43933 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PEX1O43933 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PEX1O43933 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PEX1O43933 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms