Protein–RNA interactions for Protein: A6NNY8

USP27X, Ubiquitin carboxyl-terminal hydrolase 27, humanhuman

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP27XA6NNY8 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
USP27XA6NNY8 TFP1-202ENST00000475455 1573 ntBASIC20.68■□□□□ 0.9
USP27XA6NNY8 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
USP27XA6NNY8 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC20.67■□□□□ 0.9
USP27XA6NNY8 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC20.67■□□□□ 0.9
USP27XA6NNY8 AC009053.2-201ENST00000563701 2365 ntBASIC20.67■□□□□ 0.9
USP27XA6NNY8 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
USP27XA6NNY8 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC20.67■□□□□ 0.9
USP27XA6NNY8 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
USP27XA6NNY8 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
USP27XA6NNY8 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
USP27XA6NNY8 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
USP27XA6NNY8 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
USP27XA6NNY8 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC20.67■□□□□ 0.9
USP27XA6NNY8 AC123595.1-201ENST00000440769 1046 ntBASIC20.67■□□□□ 0.9
USP27XA6NNY8 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC20.67■□□□□ 0.9
USP27XA6NNY8 AC100791.3-201ENST00000617619 330 ntBASIC20.67■□□□□ 0.9
USP27XA6NNY8 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
USP27XA6NNY8 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC20.67■□□□□ 0.9
USP27XA6NNY8 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
USP27XA6NNY8 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
USP27XA6NNY8 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
USP27XA6NNY8 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC20.67■□□□□ 0.9
USP27XA6NNY8 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
USP27XA6NNY8 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
USP27XA6NNY8 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
USP27XA6NNY8 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
USP27XA6NNY8 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
USP27XA6NNY8 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
USP27XA6NNY8 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC20.66■□□□□ 0.9
USP27XA6NNY8 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC20.66■□□□□ 0.9
USP27XA6NNY8 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC20.66■□□□□ 0.9
USP27XA6NNY8 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
USP27XA6NNY8 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
USP27XA6NNY8 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC20.66■□□□□ 0.9
USP27XA6NNY8 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
USP27XA6NNY8 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
USP27XA6NNY8 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
USP27XA6NNY8 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
USP27XA6NNY8 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC20.66■□□□□ 0.9
USP27XA6NNY8 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
USP27XA6NNY8 HYI-206ENST00000372434 1025 ntTSL 5 BASIC20.66■□□□□ 0.9
USP27XA6NNY8 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
USP27XA6NNY8 RARRES2P4-201ENST00000514074 484 ntBASIC20.66■□□□□ 0.9
USP27XA6NNY8 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC20.66■□□□□ 0.9
USP27XA6NNY8 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC20.66■□□□□ 0.9
USP27XA6NNY8 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
USP27XA6NNY8 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
USP27XA6NNY8 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
USP27XA6NNY8 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
USP27XA6NNY8 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
USP27XA6NNY8 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC20.66■□□□□ 0.9
USP27XA6NNY8 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC20.66■□□□□ 0.9
USP27XA6NNY8 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
USP27XA6NNY8 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
USP27XA6NNY8 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC20.65■□□□□ 0.9
USP27XA6NNY8 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
USP27XA6NNY8 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC20.65■□□□□ 0.9
USP27XA6NNY8 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
USP27XA6NNY8 COBL-210ENST00000632460 1941 ntTSL 5 BASIC20.65■□□□□ 0.9
USP27XA6NNY8 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
USP27XA6NNY8 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
USP27XA6NNY8 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
USP27XA6NNY8 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
USP27XA6NNY8 MKRN4P-201ENST00000444706 1521 ntBASIC20.65■□□□□ 0.9
USP27XA6NNY8 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
USP27XA6NNY8 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC20.65■□□□□ 0.9
USP27XA6NNY8 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
USP27XA6NNY8 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC20.65■□□□□ 0.9
USP27XA6NNY8 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
USP27XA6NNY8 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
USP27XA6NNY8 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC20.65■□□□□ 0.9
USP27XA6NNY8 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
USP27XA6NNY8 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
USP27XA6NNY8 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
USP27XA6NNY8 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
USP27XA6NNY8 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
USP27XA6NNY8 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
USP27XA6NNY8 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC20.64■□□□□ 0.9
USP27XA6NNY8 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
USP27XA6NNY8 AC073592.3-201ENST00000625118 1834 ntBASIC20.64■□□□□ 0.9
USP27XA6NNY8 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
USP27XA6NNY8 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
USP27XA6NNY8 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
USP27XA6NNY8 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
USP27XA6NNY8 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC20.64■□□□□ 0.89
USP27XA6NNY8 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
USP27XA6NNY8 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC20.64■□□□□ 0.89
USP27XA6NNY8 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
USP27XA6NNY8 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC20.64■□□□□ 0.89
USP27XA6NNY8 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.89
USP27XA6NNY8 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
USP27XA6NNY8 AL355472.2-201ENST00000422958 438 ntBASIC20.64■□□□□ 0.89
USP27XA6NNY8 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
USP27XA6NNY8 AC007322.4-201ENST00000509611 723 ntBASIC20.64■□□□□ 0.89
USP27XA6NNY8 AC142381.2-201ENST00000566120 298 ntBASIC20.64■□□□□ 0.89
USP27XA6NNY8 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC20.64■□□□□ 0.89
USP27XA6NNY8 AC083906.6-201ENST00000641366 219 ntBASIC20.64■□□□□ 0.89
USP27XA6NNY8 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
USP27XA6NNY8 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC20.64■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms